RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 CHTF8P0CG12 524 aa11.54□□□□□ -0.56
CAPN1-201ENST00000279247 FUSP35637 526 aaKnown RBP eCLIP11.54□□□□□ -0.56
CAPN1-201ENST00000279247 SCGB1A1P11684 91 aa11.53□□□□□ -0.56
CAPN1-201ENST00000279247 NBDYA0A0U1RRE5 68 aa11.53□□□□□ -0.56
CAPN1-201ENST00000279247 JMJD7-PLA2G4BH0Y9G9 81 aa11.53□□□□□ -0.56
CAPN1-201ENST00000279247 RBM3P98179 157 aaKnown RBP11.52□□□□□ -0.56
CAPN1-201ENST00000279247 LINC00528Q8N1L1 170 aa11.52□□□□□ -0.56
CAPN1-201ENST00000279247 IGKV3D-7A0A0C4DH55 119 aa11.51□□□□□ -0.57
CAPN1-201ENST00000279247 MRPL55Q7Z7F7 128 aaKnown RBP11.5□□□□□ -0.57
CAPN1-201ENST00000279247 KCNQ1DNQ9H478 68 aa11.49□□□□□ -0.57
CAPN1-201ENST00000279247 CCKP06307 115 aa11.49□□□□□ -0.57
CAPN1-201ENST00000279247 ETDCA0A1B0GVM5 59 aa11.49□□□□□ -0.57
CAPN1-201ENST00000279247 SDIM1Q6ZPB5 146 aa11.49□□□□□ -0.57
CAPN1-201ENST00000279247 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-201ENST00000279247 LINC00643Q86TS7 51 aa11.48□□□□□ -0.57
CAPN1-201ENST00000279247 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
CAPN1-201ENST00000279247 A0A1W2PNN7 141 aa11.47□□□□□ -0.57
CAPN1-201ENST00000279247 C3orf22Q8N5N4 141 aa11.47□□□□□ -0.57
CAPN1-201ENST00000279247 DSCR8Q96T75 97 aa11.47□□□□□ -0.57
CAPN1-201ENST00000279247 DPH3Q96FX2 82 aa11.46□□□□□ -0.57
CAPN1-201ENST00000279247 ANAPC13Q9BS18 74 aa11.46□□□□□ -0.58
CAPN1-201ENST00000279247 UBE2BP63146 152 aa11.44□□□□□ -0.58
CAPN1-201ENST00000279247 SRRM2Q9UQ35 2752 aaKnown RBP11.44□□□□□ -0.58
CAPN1-201ENST00000279247 TRBV7-6A0A0J9YX20 115 aa11.44□□□□□ -0.58
CAPN1-201ENST00000279247 ST20-AS1Q8NBB2 130 aa11.44□□□□□ -0.58
CAPN1-201ENST00000279247 VPS13DQ5THJ4 4388 aa11.43□□□□□ -0.58
CAPN1-201ENST00000279247 NDUFV3P56181 108 aaKnown RBP11.43□□□□□ -0.58
CAPN1-201ENST00000279247 PLA2G2DQ9UNK4 145 aa11.43□□□□□ -0.58
CAPN1-201ENST00000279247 Q9BRP9 147 aa11.43□□□□□ -0.58
CAPN1-201ENST00000279247 C16orf90A8MZG2 172 aa11.42□□□□□ -0.58
CAPN1-201ENST00000279247 CNBPP62633 177 aaKnown RBP11.42□□□□□ -0.58
CAPN1-201ENST00000279247 Q6ZQT0 140 aa11.42□□□□□ -0.58
CAPN1-201ENST00000279247 Q6ZRX8 168 aa11.42□□□□□ -0.58
CAPN1-201ENST00000279247 LRCOL1A6NCL2 159 aa11.41□□□□□ -0.58
CAPN1-201ENST00000279247 FAM236AA0A1B0GUQ0 79 aa11.41□□□□□ -0.58
CAPN1-201ENST00000279247 FAM236BA0A1B0GV22 79 aa11.41□□□□□ -0.58
CAPN1-201ENST00000279247 ERC2-IT1O76042 136 aa11.41□□□□□ -0.58
CAPN1-201ENST00000279247 PRLHP81277 87 aa11.4□□□□□ -0.58
CAPN1-201ENST00000279247 C14orf177Q52M58 125 aa11.4□□□□□ -0.58
CAPN1-201ENST00000279247 B5MCH6 92 aa11.4□□□□□ -0.58
CAPN1-201ENST00000279247 PHF5AQ7RTV0 110 aaKnown RBP11.4□□□□□ -0.58
CAPN1-201ENST00000279247 DNAH2Q9P225 4427 aa11.39□□□□□ -0.59
CAPN1-201ENST00000279247 PRYO14603 147 aa11.39□□□□□ -0.59
CAPN1-201ENST00000279247 IGLV5-37A0A075B6J1 123 aa11.38□□□□□ -0.59
CAPN1-201ENST00000279247 A0A087WVE0 104 aa11.38□□□□□ -0.59
CAPN1-201ENST00000279247 REG3GQ6UW15 175 aa11.38□□□□□ -0.59
CAPN1-201ENST00000279247 TRBV7-7A0A0K0K1E9 115 aa11.38□□□□□ -0.59
CAPN1-201ENST00000279247 HIST1H4AP62805 103 aaKnown RBP11.38□□□□□ -0.59
CAPN1-201ENST00000279247 Q6ZRN7 208 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-201ENST00000279247 FAM19A1Q7Z5A9 133 aa11.37□□□□□ -0.59
CAPN1-201ENST00000279247 PANO1I0J062 215 aa11.37□□□□□ -0.59
CAPN1-201ENST00000279247 LY6G6CO95867 125 aa11.37□□□□□ -0.59
CAPN1-201ENST00000279247 Q8N377 158 aa11.37□□□□□ -0.59
CAPN1-201ENST00000279247 KRTAP4-16G5E9R7 235 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-201ENST00000279247 Q6Q795 121 aa11.36□□□□□ -0.59
CAPN1-201ENST00000279247 HIGD2AQ9BW72 106 aa11.36□□□□□ -0.59
CAPN1-201ENST00000279247 UBL5Q9BZL1 73 aa11.35□□□□□ -0.59
CAPN1-201ENST00000279247 GHRHP01286 108 aa11.35□□□□□ -0.59
CAPN1-201ENST00000279247 KRTAP11-1Q8IUC1 163 aa11.35□□□□□ -0.59
CAPN1-201ENST00000279247 C9orf163Q8N9P6 203 aa11.35□□□□□ -0.59
CAPN1-201ENST00000279247 DHRS4-AS1Q9P1J3 65 aa11.34□□□□□ -0.59
CAPN1-201ENST00000279247 HYDINQ4G0P3 5121 aa11.34□□□□□ -0.59
CAPN1-201ENST00000279247 SPRR1AP35321 89 aa11.34□□□□□ -0.59
CAPN1-201ENST00000279247 HAMPP81172 84 aa11.34□□□□□ -0.59
CAPN1-201ENST00000279247 LOC110117498A0A087WWA1 95 aa11.33□□□□□ -0.6
CAPN1-201ENST00000279247 SCXQ7RTU7 201 aa11.32□□□□□ -0.6
CAPN1-201ENST00000279247 TRBV7-4A0A0J9YYF1 115 aa11.31□□□□□ -0.6
CAPN1-201ENST00000279247 C3orf84H3BNL1 204 aa11.3□□□□□ -0.6
CAPN1-201ENST00000279247 H3BQ85 93 aa11.3□□□□□ -0.6
CAPN1-201ENST00000279247 Q6JHZ5 121 aa11.3□□□□□ -0.6
CAPN1-201ENST00000279247 LINC01547P58512 204 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-201ENST00000279247 A0A0G2JQZ4 141 aa11.29□□□□□ -0.6
CAPN1-201ENST00000279247 A0A087WTM6 91 aa11.29□□□□□ -0.6
CAPN1-201ENST00000279247 IMUPQ9GZP8 106 aa11.28□□□□□ -0.6
CAPN1-201ENST00000279247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-201ENST00000279247 WWC2-AS2Q96NR7 200 aa11.28□□□□□ -0.6
CAPN1-201ENST00000279247 Q6ZVQ6 151 aa11.27□□□□□ -0.6
CAPN1-201ENST00000279247 CCDC179H3BU77 68 aa11.26□□□□□ -0.61
CAPN1-201ENST00000279247 PDE6GP18545 87 aa11.25□□□□□ -0.61
CAPN1-201ENST00000279247 RTL8CO15255 209 aa11.22□□□□□ -0.61
CAPN1-201ENST00000279247 UBE2AP49459 152 aa11.22□□□□□ -0.61
CAPN1-201ENST00000279247 C1orf134Q5TEV5 83 aa11.22□□□□□ -0.61
CAPN1-201ENST00000279247 Q6ZR54 194 aa11.22□□□□□ -0.61
CAPN1-201ENST00000279247 EPM2AB3EWF7 344 aa11.21□□□□□ -0.61
CAPN1-201ENST00000279247 C1orf137Q5JT78 98 aa11.21□□□□□ -0.62
CAPN1-201ENST00000279247 IGLV5-48A0A075B6I7 105 aa11.18□□□□□ -0.62
CAPN1-201ENST00000279247 Q8N9L7 120 aa11.18□□□□□ -0.62
CAPN1-201ENST00000279247 LINC00474Q9P2X8 69 aa11.18□□□□□ -0.62
CAPN1-201ENST00000279247 LINC00476Q8WZB0 136 aa11.17□□□□□ -0.62
CAPN1-201ENST00000279247 FRAS1Q86XX4 4008 aa11.16□□□□□ -0.62
CAPN1-201ENST00000279247 F8WEM9 126 aa11.16□□□□□ -0.62
CAPN1-201ENST00000279247 HECTD4Q9Y4D8 3996 aa11.16□□□□□ -0.62
CAPN1-201ENST00000279247 IGLV5-52A0A0A0MRZ9 124 aa11.16□□□□□ -0.62
CAPN1-201ENST00000279247 A0A1W2PNM2 257 aa11.16□□□□□ -0.62
CAPN1-201ENST00000279247 TNP2Q05952 138 aa11.15□□□□□ -0.62
CAPN1-201ENST00000279247 NREPQ16612 68 aa11.15□□□□□ -0.62
CAPN1-201ENST00000279247 SPACA4Q8TDM5 124 aa11.15□□□□□ -0.62
CAPN1-201ENST00000279247 SMIM29Q86T20 159 aa11.14□□□□□ -0.63
CAPN1-201ENST00000279247 ATP5EP2Q5VTU8 51 aa11.14□□□□□ -0.63
CAPN1-201ENST00000279247 DNAH6Q9C0G6 4158 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms