RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 LINC00588Q9Y4M8 146 aa3.89□□□□□ -1.79
CDKAL1-201ENST00000274695 UTP20O75691 2785 aaKnown RBP3.89□□□□□ -1.79
CDKAL1-201ENST00000274695 MAP1BP46821 2468 aaKnown RBP3.88□□□□□ -1.79
CDKAL1-201ENST00000274695 CACNA1AO00555 2505 aa3.88□□□□□ -1.79
CDKAL1-201ENST00000274695 A8MUN3 132 aa3.88□□□□□ -1.79
CDKAL1-201ENST00000274695 LAMTOR3Q9UHA4 124 aa3.87□□□□□ -1.79
CDKAL1-201ENST00000274695 MUC6Q6W4X9 2439 aa3.87□□□□□ -1.79
CDKAL1-201ENST00000274695 IGKV2-30P06310 120 aa3.87□□□□□ -1.79
CDKAL1-201ENST00000274695 ESRGQ1W209 222 aa3.87□□□□□ -1.79
CDKAL1-201ENST00000274695 LYSTQ99698 3801 aa3.87□□□□□ -1.79
CDKAL1-201ENST00000274695 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
CDKAL1-201ENST00000274695 SPANXA2-OT1Q8N9U9 137 aa3.86□□□□□ -1.79
CDKAL1-201ENST00000274695 TRRAPQ9Y4A5 3859 aa3.86□□□□□ -1.79
CDKAL1-201ENST00000274695 PRKDCP78527 4128 aaKnown RBP3.86□□□□□ -1.79
CDKAL1-201ENST00000274695 ASB16-AS1Q495Z4 193 aa3.86□□□□□ -1.79
CDKAL1-201ENST00000274695 LINC01556Q5JQF7 62 aa3.86□□□□□ -1.79
CDKAL1-201ENST00000274695 H3BPC8 53 aa3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 FAM229BQ4G0N7 80 aa3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 Q6ZRX8 168 aa3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 A0A1W2PNM2 257 aa3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 DSCR10P59022 87 aa3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 RP1L1Q8IWN7 2480 aaPredicted RBP3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 ZANQ9Y493 2812 aa3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 ALMS1Q8TCU4 4167 aa3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 A0A1B0GVX0 72 aa3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 KRTAP29-1A8MX34 341 aaPredicted RBP3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 ANGP03950 147 aaKnown RBP3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 KRTAP7-1Q8IUC3 87 aa3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 DNAH7Q8WXX0 4024 aa3.85□□□□□ -1.79
CDKAL1-201ENST00000274695 IGLV1-50A0A075B6I6 118 aa3.84□□□□□ -1.79
CDKAL1-201ENST00000274695 SPRR1BP22528 89 aa3.84□□□□□ -1.79
CDKAL1-201ENST00000274695 KRTAP24-1Q3LI83 254 aa3.84□□□□□ -1.79
CDKAL1-201ENST00000274695 KPRPQ5T749 579 aaPredicted RBP3.84□□□□□ -1.79
CDKAL1-201ENST00000274695 MAPK1IP1LQ8NDC0 245 aa3.84□□□□□ -1.79
CDKAL1-201ENST00000274695 CAMK2N2Q96S95 79 aa3.84□□□□□ -1.79
CDKAL1-201ENST00000274695 DNAH10OSP0CZ25 163 aa3.84□□□□□ -1.79
CDKAL1-201ENST00000274695 Q9BRP9 147 aa3.84□□□□□ -1.79
CDKAL1-201ENST00000274695 ANKRD17O75179 2603 aaKnown RBP3.83□□□□□ -1.8
CDKAL1-201ENST00000274695 SPART-AS1P0CW21 52 aa3.83□□□□□ -1.8
CDKAL1-201ENST00000274695 SPTAN1Q13813 2472 aaKnown RBP3.83□□□□□ -1.8
CDKAL1-201ENST00000274695 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
CDKAL1-201ENST00000274695 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
CDKAL1-201ENST00000274695 IGSF10Q6WRI0 2623 aa3.83□□□□□ -1.8
CDKAL1-201ENST00000274695 DEFB130BP0DP73 79 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 DEFB130AP0DP74 79 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 TYMSOSQ8TAI1 123 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 SNURFQ9Y675 71 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 CHD6Q8TD26 2715 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 HAMPP81172 84 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 PLAC8Q9NZF1 115 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 IGKV3OR2-268A0A0C4DH90 116 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 CIRBP-AS1Q8TBR5 109 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 LINC00474Q9P2X8 69 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 AKAP6Q13023 2319 aa3.82□□□□□ -1.8
CDKAL1-201ENST00000274695 TPRP12270 2363 aaKnown RBP3.81□□□□□ -1.8
CDKAL1-201ENST00000274695 ZFHX2Q9C0A1 2572 aaPredicted RBP3.81□□□□□ -1.8
CDKAL1-201ENST00000274695 WFDC11Q8NEX6 87 aa3.81□□□□□ -1.8
CDKAL1-201ENST00000274695 APCP25054 2843 aa3.81□□□□□ -1.8
CDKAL1-201ENST00000274695 TTC28Q96AY4 2481 aa3.81□□□□□ -1.8
CDKAL1-201ENST00000274695 FUSP35637 526 aaKnown RBP eCLIP3.81□□□□□ -1.8
CDKAL1-201ENST00000274695 HIGD2BQ4VC39 106 aa3.81□□□□□ -1.8
CDKAL1-201ENST00000274695 CLPSL2Q6UWE3 100 aa3.81□□□□□ -1.8
CDKAL1-201ENST00000274695 TEX15Q9BXT5 2789 aa3.81□□□□□ -1.8
CDKAL1-201ENST00000274695 SORL1Q92673 2214 aa3.8□□□□□ -1.8
CDKAL1-201ENST00000274695 ETDCA0A1B0GVM5 59 aa3.8□□□□□ -1.8
CDKAL1-201ENST00000274695 C9orf163Q8N9P6 203 aa3.8□□□□□ -1.8
CDKAL1-201ENST00000274695 SPTA1P02549 2419 aa3.8□□□□□ -1.8
CDKAL1-201ENST00000274695 USP9XQ93008 2570 aaPredicted RBP3.8□□□□□ -1.8
CDKAL1-201ENST00000274695 NDUFB1O75438 58 aa3.8□□□□□ -1.8
CDKAL1-201ENST00000274695 FLNCQ14315 2725 aa3.8□□□□□ -1.8
CDKAL1-201ENST00000274695 VPS13DQ5THJ4 4388 aa3.8□□□□□ -1.8
CDKAL1-201ENST00000274695 DNAH6Q9C0G6 4158 aa3.79□□□□□ -1.8
CDKAL1-201ENST00000274695 UBE2AP49459 152 aa3.79□□□□□ -1.8
CDKAL1-201ENST00000274695 IGLV10-54A0A075B6I4 117 aa3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 DNAH17Q9UFH2 4485 aa3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 SYCNQ0VAF6 134 aa3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 KLK12Q9UKR0 248 aa3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 HUWE1Q7Z6Z7 4374 aaKnown RBP3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 IGF2RP11717 2491 aa3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 TRAV22A0A0B4J277 110 aa3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 LOC101927531A0A1B0GV80 90 aa3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 C1orf64Q8NEQ6 169 aa3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 HIGD2AQ9BW72 106 aa3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
CDKAL1-201ENST00000274695 ATRXP46100 2492 aa3.77□□□□□ -1.81
CDKAL1-201ENST00000274695 HCG22E2RYF7 251 aa3.77□□□□□ -1.81
CDKAL1-201ENST00000274695 B9D2Q9BPU9 175 aa3.77□□□□□ -1.81
CDKAL1-201ENST00000274695 KMT2BQ9UMN6 2715 aaPredicted RBP3.77□□□□□ -1.81
CDKAL1-201ENST00000274695 ZNF462Q96JM2 2506 aa3.77□□□□□ -1.81
CDKAL1-201ENST00000274695 PSCAO43653 123 aa3.77□□□□□ -1.81
CDKAL1-201ENST00000274695 WFDC10BQ8IUB3 73 aa3.77□□□□□ -1.81
CDKAL1-201ENST00000274695 DNAH9Q9NYC9 4486 aa3.77□□□□□ -1.81
CDKAL1-201ENST00000274695 ITPR3Q14573 2671 aa3.77□□□□□ -1.81
CDKAL1-201ENST00000274695 C1orf137Q5JT78 98 aa3.76□□□□□ -1.81
CDKAL1-201ENST00000274695 XAGE1AQ9HD64 81 aa3.76□□□□□ -1.81
CDKAL1-201ENST00000274695 IGKV2D-24A0A075B6R9 120 aa3.76□□□□□ -1.81
CDKAL1-201ENST00000274695 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
CDKAL1-201ENST00000274695 CNBPP62633 177 aaKnown RBP3.76□□□□□ -1.81
CDKAL1-201ENST00000274695 DEFB135Q30KP9 77 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms