RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 Q6ZTC4 211 aa7.87□□□□□ -1.15
CLSTN3-201ENST00000266546 MRPL55Q7Z7F7 128 aaKnown RBP7.87□□□□□ -1.15
CLSTN3-201ENST00000266546 C10orf25Q5T742 122 aa7.87□□□□□ -1.15
CLSTN3-201ENST00000266546 A0A096LNI7 61 aa7.86□□□□□ -1.15
CLSTN3-201ENST00000266546 FAM104AQ969W3 186 aa7.85□□□□□ -1.15
CLSTN3-201ENST00000266546 PSPHP1O15172 72 aa7.85□□□□□ -1.15
CLSTN3-201ENST00000266546 NSD1Q96L73 2696 aaPredicted RBP7.85□□□□□ -1.15
CLSTN3-201ENST00000266546 LINC00612Q8N6U2 182 aa7.85□□□□□ -1.15
CLSTN3-201ENST00000266546 Q8NAQ8 132 aa7.85□□□□□ -1.15
CLSTN3-201ENST00000266546 ITPR2Q14571 2701 aa7.84□□□□□ -1.15
CLSTN3-201ENST00000266546 CHKB-CPT1BH3BT56 60 aa7.84□□□□□ -1.15
CLSTN3-201ENST00000266546 LINC00208Q96KT6 92 aa7.84□□□□□ -1.15
CLSTN3-201ENST00000266546 PLAC8L1A1L4L8 177 aa7.84□□□□□ -1.15
CLSTN3-201ENST00000266546 H3BNG1 76 aa7.84□□□□□ -1.15
CLSTN3-201ENST00000266546 ASH1LQ9NR48 2969 aaKnown RBP7.84□□□□□ -1.16
CLSTN3-201ENST00000266546 KLKP1Q107X0 134 aa7.82□□□□□ -1.16
CLSTN3-201ENST00000266546 Q6ZRU5 148 aa7.82□□□□□ -1.16
CLSTN3-201ENST00000266546 A6NED7 52 aa7.82□□□□□ -1.16
CLSTN3-201ENST00000266546 NBEAL2Q6ZNJ1 2754 aa7.82□□□□□ -1.16
CLSTN3-201ENST00000266546 C7orf33Q8WU49 177 aa7.82□□□□□ -1.16
CLSTN3-201ENST00000266546 C6orf48Q9UBA6 75 aa7.81□□□□□ -1.16
CLSTN3-201ENST00000266546 PMAIP1Q13794 54 aa7.81□□□□□ -1.16
CLSTN3-201ENST00000266546 CRYBG3Q68DQ2 2970 aa7.81□□□□□ -1.16
CLSTN3-201ENST00000266546 H7BZZ5 65 aa7.81□□□□□ -1.16
CLSTN3-201ENST00000266546 SMIM29Q86T20 159 aa7.81□□□□□ -1.16
CLSTN3-201ENST00000266546 IGKV4-1P06312 121 aa7.8□□□□□ -1.16
CLSTN3-201ENST00000266546 ELOF1P60002 83 aaKnown RBP7.8□□□□□ -1.16
CLSTN3-201ENST00000266546 STAB2Q8WWQ8 2551 aa7.8□□□□□ -1.16
CLSTN3-201ENST00000266546 DCHS2Q6V1P9 2916 aa7.79□□□□□ -1.16
CLSTN3-201ENST00000266546 LINC00336Q6ZUF6 198 aa7.79□□□□□ -1.16
CLSTN3-201ENST00000266546 LYPD5Q6UWN5 251 aa7.79□□□□□ -1.16
CLSTN3-201ENST00000266546 OBSCN-AS1Q96MR7 158 aa7.79□□□□□ -1.16
CLSTN3-201ENST00000266546 B9D2Q9BPU9 175 aa7.79□□□□□ -1.16
CLSTN3-201ENST00000266546 BSNQ9UPA5 3926 aa7.79□□□□□ -1.16
CLSTN3-201ENST00000266546 KRTAP10-11P60412 298 aa7.78□□□□□ -1.16
CLSTN3-201ENST00000266546 KIAA0087Q14695 138 aa7.78□□□□□ -1.16
CLSTN3-201ENST00000266546 IGLV6-57P01721 117 aa7.78□□□□□ -1.16
CLSTN3-201ENST00000266546 LINC00474Q9P2X8 69 aa7.78□□□□□ -1.16
CLSTN3-201ENST00000266546 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.17
CLSTN3-201ENST00000266546 C1orf134Q5TEV5 83 aa7.77□□□□□ -1.17
CLSTN3-201ENST00000266546 HCG22E2RYF7 251 aa7.76□□□□□ -1.17
CLSTN3-201ENST00000266546 PRR15LQ9BU68 103 aa7.76□□□□□ -1.17
CLSTN3-201ENST00000266546 DEFB116Q30KQ4 102 aa7.75□□□□□ -1.17
CLSTN3-201ENST00000266546 A0A087WSZ3 146 aa7.75□□□□□ -1.17
CLSTN3-201ENST00000266546 LINC00167Q96N53 147 aa7.74□□□□□ -1.17
CLSTN3-201ENST00000266546 ERC2-IT1O76042 136 aa7.74□□□□□ -1.17
CLSTN3-201ENST00000266546 CELSR2Q9HCU4 2923 aa7.73□□□□□ -1.17
CLSTN3-201ENST00000266546 CYSTM1Q9H1C7 97 aa7.73□□□□□ -1.17
CLSTN3-201ENST00000266546 SEC61GP60059 68 aa7.73□□□□□ -1.17
CLSTN3-201ENST00000266546 WWC2-AS2Q96NR7 200 aa7.73□□□□□ -1.17
CLSTN3-201ENST00000266546 FBN2P35556 2912 aa7.73□□□□□ -1.17
CLSTN3-201ENST00000266546 CASC2Q6XLA1 102 aa7.73□□□□□ -1.17
CLSTN3-201ENST00000266546 MDFIQ99750 246 aa7.73□□□□□ -1.17
CLSTN3-201ENST00000266546 NF1P21359 2839 aa7.73□□□□□ -1.17
CLSTN3-201ENST00000266546 F8WDY8 70 aa7.72□□□□□ -1.17
CLSTN3-201ENST00000266546 REG3GQ6UW15 175 aa7.72□□□□□ -1.17
CLSTN3-201ENST00000266546 CSMD1Q96PZ7 3565 aa7.72□□□□□ -1.17
CLSTN3-201ENST00000266546 GVQW2A0A096LPI5 108 aaPredicted RBP7.71□□□□□ -1.18
CLSTN3-201ENST00000266546 A0A1B0GW54 56 aa7.71□□□□□ -1.18
CLSTN3-201ENST00000266546 H0Y9P7 68 aa7.71□□□□□ -1.18
CLSTN3-201ENST00000266546 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
CLSTN3-201ENST00000266546 TRBV7-4A0A0J9YYF1 115 aa7.7□□□□□ -1.18
CLSTN3-201ENST00000266546 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
CLSTN3-201ENST00000266546 VPREB1P12018 145 aa7.7□□□□□ -1.18
CLSTN3-201ENST00000266546 Q8NBF4 154 aa7.7□□□□□ -1.18
CLSTN3-201ENST00000266546 K7EIL1 84 aa7.7□□□□□ -1.18
CLSTN3-201ENST00000266546 TENM4Q6N022 2769 aa7.69□□□□□ -1.18
CLSTN3-201ENST00000266546 LINC01556Q5JQF7 62 aa7.68□□□□□ -1.18
CLSTN3-201ENST00000266546 HIVEP1P15822 2718 aa7.67□□□□□ -1.18
CLSTN3-201ENST00000266546 C22orf24Q9Y442 160 aa7.67□□□□□ -1.18
CLSTN3-201ENST00000266546 LINC00528Q8N1L1 170 aa7.67□□□□□ -1.18
CLSTN3-201ENST00000266546 Q9BRP9 147 aa7.67□□□□□ -1.18
CLSTN3-201ENST00000266546 PCOTHQ58A44 107 aa7.66□□□□□ -1.18
CLSTN3-201ENST00000266546 Q6ZRX8 168 aa7.66□□□□□ -1.18
CLSTN3-201ENST00000266546 LIMD2Q9BT23 127 aa7.66□□□□□ -1.18
CLSTN3-201ENST00000266546 PRLHP81277 87 aa7.65□□□□□ -1.19
CLSTN3-201ENST00000266546 C1orf64Q8NEQ6 169 aa7.64□□□□□ -1.19
CLSTN3-201ENST00000266546 PDZD2O15018 2839 aa7.64□□□□□ -1.19
CLSTN3-201ENST00000266546 Q5XG85 94 aa7.64□□□□□ -1.19
CLSTN3-201ENST00000266546 Q6ZRP5 223 aa7.63□□□□□ -1.19
CLSTN3-201ENST00000266546 ST20-AS1Q8NBB2 130 aa7.63□□□□□ -1.19
CLSTN3-201ENST00000266546 IGLV9-49A0A0B4J1Y8 123 aa7.63□□□□□ -1.19
CLSTN3-201ENST00000266546 SPINK6Q6UWN8 80 aa7.62□□□□□ -1.19
CLSTN3-201ENST00000266546 MXRA5Q9NR99 2828 aa7.61□□□□□ -1.19
CLSTN3-201ENST00000266546 LINC00476Q8WZB0 136 aa7.61□□□□□ -1.19
CLSTN3-201ENST00000266546 PRR34Q9NV39 138 aa7.61□□□□□ -1.19
CLSTN3-201ENST00000266546 K7EQZ3 153 aa7.61□□□□□ -1.19
CLSTN3-201ENST00000266546 SVEP1Q4LDE5 3571 aa7.59□□□□□ -1.19
CLSTN3-201ENST00000266546 A8MUN3 132 aa7.59□□□□□ -1.19
CLSTN3-201ENST00000266546 DNAH10OSP0CZ25 163 aa7.59□□□□□ -1.19
CLSTN3-201ENST00000266546 OXTP01178 125 aa7.59□□□□□ -1.2
CLSTN3-201ENST00000266546 KCNQ1DNQ9H478 68 aa7.59□□□□□ -1.2
CLSTN3-201ENST00000266546 C16orf90A8MZG2 172 aa7.58□□□□□ -1.2
CLSTN3-201ENST00000266546 Q8N377 158 aa7.58□□□□□ -1.2
CLSTN3-201ENST00000266546 IGHV6-1A0A0B4J1U7 121 aa7.56□□□□□ -1.2
CLSTN3-201ENST00000266546 SERTAD4-AS1Q5TG53 156 aa7.56□□□□□ -1.2
CLSTN3-201ENST00000266546 H3BPC8 53 aa7.56□□□□□ -1.2
CLSTN3-201ENST00000266546 LINC00588Q9Y4M8 146 aa7.56□□□□□ -1.2
CLSTN3-201ENST00000266546 OCR1Q9BZK8 76 aa7.55□□□□□ -1.2
CLSTN3-201ENST00000266546 RPL37AP61513 92 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms