RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 MIR22HGQ0VDD5 57 aa11.84□□□□□ -0.51
NOTCH3-201ENST00000263388 DNAH10OSP0CZ25 163 aa11.83□□□□□ -0.51
NOTCH3-201ENST00000263388 Q8NAQ8 132 aa11.83□□□□□ -0.52
NOTCH3-201ENST00000263388 RTL8CO15255 209 aa11.83□□□□□ -0.52
NOTCH3-201ENST00000263388 CHD6Q8TD26 2715 aa11.83□□□□□ -0.52
NOTCH3-201ENST00000263388 KTN1-AS1Q86SY8 53 aa11.82□□□□□ -0.52
NOTCH3-201ENST00000263388 NBDYA0A0U1RRE5 68 aa11.79□□□□□ -0.52
NOTCH3-201ENST00000263388 APLNQ9ULZ1 77 aa11.79□□□□□ -0.52
NOTCH3-201ENST00000263388 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
NOTCH3-201ENST00000263388 LITAFQ99732 161 aa11.78□□□□□ -0.52
NOTCH3-201ENST00000263388 ST20-AS1Q8NBB2 130 aa11.77□□□□□ -0.52
NOTCH3-201ENST00000263388 LINC00588Q9Y4M8 146 aa11.77□□□□□ -0.52
NOTCH3-201ENST00000263388 A0A0C4DFX4 3053 aa11.77□□□□□ -0.53
NOTCH3-201ENST00000263388 MRPL34Q9BQ48 92 aaKnown RBP11.76□□□□□ -0.53
NOTCH3-201ENST00000263388 K7EQZ3 153 aa11.76□□□□□ -0.53
NOTCH3-201ENST00000263388 HELZ2Q9BYK8 2649 aaKnown RBP11.74□□□□□ -0.53
NOTCH3-201ENST00000263388 A8MUN3 132 aa11.74□□□□□ -0.53
NOTCH3-201ENST00000263388 LUZP6Q538Z0 58 aa11.73□□□□□ -0.53
NOTCH3-201ENST00000263388 KLKP1Q107X0 134 aa11.73□□□□□ -0.53
NOTCH3-201ENST00000263388 KLK9Q2XQG4 91 aa11.73□□□□□ -0.53
NOTCH3-201ENST00000263388 NBEAL1Q6ZS30 2694 aa11.72□□□□□ -0.53
NOTCH3-201ENST00000263388 KCNQ1DNQ9H478 68 aa11.72□□□□□ -0.53
NOTCH3-201ENST00000263388 FAM168BA1KXE4 195 aa11.71□□□□□ -0.54
NOTCH3-201ENST00000263388 CDC42SE1Q9NRR8 79 aa11.69□□□□□ -0.54
NOTCH3-201ENST00000263388 LCA10Q71F78 164 aa11.69□□□□□ -0.54
NOTCH3-201ENST00000263388 TEX15Q9BXT5 2789 aa11.66□□□□□ -0.54
NOTCH3-201ENST00000263388 PRR15Q8IV56 129 aa11.64□□□□□ -0.55
NOTCH3-201ENST00000263388 IGLV1-50A0A075B6I6 118 aa11.64□□□□□ -0.55
NOTCH3-201ENST00000263388 CSNK1G2-AS1Q8NCQ2 148 aa11.63□□□□□ -0.55
NOTCH3-201ENST00000263388 LINC00528Q8N1L1 170 aa11.63□□□□□ -0.55
NOTCH3-201ENST00000263388 C9orf129Q5T035 196 aaKnown RBP11.63□□□□□ -0.55
NOTCH3-201ENST00000263388 COX6B2Q6YFQ2 88 aa11.61□□□□□ -0.55
NOTCH3-201ENST00000263388 IGFL1Q6UW32 110 aa11.6□□□□□ -0.55
NOTCH3-201ENST00000263388 LINC01554Q52M75 96 aa11.6□□□□□ -0.55
NOTCH3-201ENST00000263388 MAP1AP78559 2803 aaPredicted RBP11.59□□□□□ -0.55
NOTCH3-201ENST00000263388 A0A1B0GVX0 72 aa11.58□□□□□ -0.56
NOTCH3-201ENST00000263388 SPANXA2-OT1Q8N9U9 137 aa11.58□□□□□ -0.56
NOTCH3-201ENST00000263388 PRR34Q9NV39 138 aa11.57□□□□□ -0.56
NOTCH3-201ENST00000263388 GCN1Q92616 2671 aaKnown RBP11.56□□□□□ -0.56
NOTCH3-201ENST00000263388 LINC00336Q6ZUF6 198 aa11.55□□□□□ -0.56
NOTCH3-201ENST00000263388 PLA2G2DQ9UNK4 145 aa11.55□□□□□ -0.56
NOTCH3-201ENST00000263388 C8orf17Q9NRJ1 99 aa11.54□□□□□ -0.56
NOTCH3-201ENST00000263388 KRTAP24-1Q3LI83 254 aa11.54□□□□□ -0.56
NOTCH3-201ENST00000263388 Q8N377 158 aa11.54□□□□□ -0.56
NOTCH3-201ENST00000263388 ZNF861PO60384 105 aa11.53□□□□□ -0.56
NOTCH3-201ENST00000263388 KMT2BQ9UMN6 2715 aaPredicted RBP11.53□□□□□ -0.56
NOTCH3-201ENST00000263388 STAB1Q9NY15 2570 aa11.53□□□□□ -0.56
NOTCH3-201ENST00000263388 OBSCN-AS1Q96MR7 158 aa11.53□□□□□ -0.56
NOTCH3-201ENST00000263388 H7BZZ5 65 aa11.52□□□□□ -0.57
NOTCH3-201ENST00000263388 C15orf56Q8N910 161 aa11.52□□□□□ -0.57
NOTCH3-201ENST00000263388 LINC00304Q8N9R0 145 aa11.52□□□□□ -0.57
NOTCH3-201ENST00000263388 UNC79Q9P2D8 2635 aa11.51□□□□□ -0.57
NOTCH3-201ENST00000263388 CHD7Q9P2D1 2997 aa11.51□□□□□ -0.57
NOTCH3-201ENST00000263388 MKI67P46013 3256 aaKnown RBP11.51□□□□□ -0.57
NOTCH3-201ENST00000263388 XIRP2A4UGR9 3374 aa11.51□□□□□ -0.57
NOTCH3-201ENST00000263388 TLX1NBP0CAT3 122 aa11.5□□□□□ -0.57
NOTCH3-201ENST00000263388 RBM12B-AS1Q9P1G2 102 aa11.5□□□□□ -0.57
NOTCH3-201ENST00000263388 DSCR10P59022 87 aa11.49□□□□□ -0.57
NOTCH3-201ENST00000263388 WWC2-AS2Q96NR7 200 aa11.49□□□□□ -0.57
NOTCH3-201ENST00000263388 J3QL48 77 aa11.49□□□□□ -0.57
NOTCH3-201ENST00000263388 COL6A5A8TX70 2615 aa11.47□□□□□ -0.57
NOTCH3-201ENST00000263388 VPS13AQ96RL7 3174 aa11.47□□□□□ -0.57
NOTCH3-201ENST00000263388 NOTCH1P46531 2555 aa11.46□□□□□ -0.57
NOTCH3-201ENST00000263388 LINC00483Q53H64 154 aa11.45□□□□□ -0.58
NOTCH3-201ENST00000263388 FAM104AQ969W3 186 aa11.45□□□□□ -0.58
NOTCH3-201ENST00000263388 EIF4EBP3O60516 100 aaPredicted RBP11.44□□□□□ -0.58
NOTCH3-201ENST00000263388 TRANK1O15050 2925 aa11.42□□□□□ -0.58
NOTCH3-201ENST00000263388 Q1T7F1 81 aa11.42□□□□□ -0.58
NOTCH3-201ENST00000263388 MGAQ8IWI9 3026 aa11.41□□□□□ -0.58
NOTCH3-201ENST00000263388 A0A0D9SG42 100 aa11.4□□□□□ -0.58
NOTCH3-201ENST00000263388 IGLV5-37A0A075B6J1 123 aa11.38□□□□□ -0.59
NOTCH3-201ENST00000263388 C9orf92A6NGG3 77 aa11.38□□□□□ -0.59
NOTCH3-201ENST00000263388 KRTAP10-11P60412 298 aa11.36□□□□□ -0.59
NOTCH3-201ENST00000263388 LINC00612Q8N6U2 182 aa11.36□□□□□ -0.59
NOTCH3-201ENST00000263388 C19orf73Q9NVV2 129 aa11.35□□□□□ -0.59
NOTCH3-201ENST00000263388 GIG44P09565 113 aaPredicted RBP11.35□□□□□ -0.59
NOTCH3-201ENST00000263388 C9orf163Q8N9P6 203 aa11.35□□□□□ -0.59
NOTCH3-201ENST00000263388 A0A087WTM6 91 aa11.33□□□□□ -0.6
NOTCH3-201ENST00000263388 K7EIL1 84 aa11.33□□□□□ -0.6
NOTCH3-201ENST00000263388 TRIOO75962 3097 aa11.32□□□□□ -0.6
NOTCH3-201ENST00000263388 ITPR2Q14571 2701 aa11.32□□□□□ -0.6
NOTCH3-201ENST00000263388 CNBPP62633 177 aaKnown RBP11.31□□□□□ -0.6
NOTCH3-201ENST00000263388 IGLV7-43P04211 117 aa11.3□□□□□ -0.6
NOTCH3-201ENST00000263388 SPRR4Q96PI1 79 aa11.29□□□□□ -0.6
NOTCH3-201ENST00000263388 DMBT1Q9UGM3 2413 aaPredicted RBP11.28□□□□□ -0.6
NOTCH3-201ENST00000263388 PSORS1C2Q9UIG4 136 aa11.27□□□□□ -0.6
NOTCH3-201ENST00000263388 FRYQ5TBA9 3013 aa11.27□□□□□ -0.61
NOTCH3-201ENST00000263388 IGLV5-48A0A075B6I7 105 aa11.26□□□□□ -0.61
NOTCH3-201ENST00000263388 TEP1Q99973 2627 aaKnown RBP11.26□□□□□ -0.61
NOTCH3-201ENST00000263388 DSPP15924 2871 aaKnown RBP11.24□□□□□ -0.61
NOTCH3-201ENST00000263388 ZNF292O60281 2723 aa11.24□□□□□ -0.61
NOTCH3-201ENST00000263388 PRUNE2Q8WUY3 3088 aa11.24□□□□□ -0.61
NOTCH3-201ENST00000263388 A0A0G2JQZ4 141 aa11.23□□□□□ -0.61
NOTCH3-201ENST00000263388 A0A1W2PNN7 141 aa11.23□□□□□ -0.61
NOTCH3-201ENST00000263388 CELSR3Q9NYQ7 3312 aa11.23□□□□□ -0.61
NOTCH3-201ENST00000263388 STAB2Q8WWQ8 2551 aa11.23□□□□□ -0.61
NOTCH3-201ENST00000263388 A0A0A0MQY5 61 aa11.23□□□□□ -0.61
NOTCH3-201ENST00000263388 Q75L30 129 aa11.23□□□□□ -0.61
NOTCH3-201ENST00000263388 WIPF1O43516 503 aa11.22□□□□□ -0.61
NOTCH3-201ENST00000263388 Q8N1X5 172 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms