RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 EPM2AB3EWF7 344 aa6.53□□□□□ -1.36
CTDSPL2-201ENST00000260327 TRIOO75962 3097 aa6.52□□□□□ -1.37
CTDSPL2-201ENST00000260327 ZNF575Q86XF7 245 aa6.52□□□□□ -1.37
CTDSPL2-201ENST00000260327 A8MWP4 228 aa6.51□□□□□ -1.37
CTDSPL2-201ENST00000260327 LCA10Q71F78 164 aa6.51□□□□□ -1.37
CTDSPL2-201ENST00000260327 DNAH14Q0VDD8 3507 aa6.51□□□□□ -1.37
CTDSPL2-201ENST00000260327 CHTF8P0CG12 524 aa6.51□□□□□ -1.37
CTDSPL2-201ENST00000260327 CDH23Q9H251 3354 aa6.5□□□□□ -1.37
CTDSPL2-201ENST00000260327 PRR15Q8IV56 129 aa6.5□□□□□ -1.37
CTDSPL2-201ENST00000260327 F8P00451 2351 aa6.5□□□□□ -1.37
CTDSPL2-201ENST00000260327 UQCR11O14957 56 aa6.49□□□□□ -1.37
CTDSPL2-201ENST00000260327 CELSR3Q9NYQ7 3312 aa6.49□□□□□ -1.37
CTDSPL2-201ENST00000260327 MIR22HGQ0VDD5 57 aa6.48□□□□□ -1.37
CTDSPL2-201ENST00000260327 LINC00528Q8N1L1 170 aa6.48□□□□□ -1.37
CTDSPL2-201ENST00000260327 Q8NAQ8 132 aa6.48□□□□□ -1.37
CTDSPL2-201ENST00000260327 LINC00313P59037 77 aa6.48□□□□□ -1.37
CTDSPL2-201ENST00000260327 Q5XG85 94 aa6.48□□□□□ -1.37
CTDSPL2-201ENST00000260327 CYSTM1Q9H1C7 97 aa6.48□□□□□ -1.37
CTDSPL2-201ENST00000260327 GVQW2A0A096LPI5 108 aaPredicted RBP6.47□□□□□ -1.37
CTDSPL2-201ENST00000260327 IGFL1Q6UW32 110 aa6.47□□□□□ -1.37
CTDSPL2-201ENST00000260327 CSNK1G2-AS1Q8NCQ2 148 aa6.47□□□□□ -1.37
CTDSPL2-201ENST00000260327 Q8N377 158 aa6.46□□□□□ -1.37
CTDSPL2-201ENST00000260327 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
CTDSPL2-201ENST00000260327 FREM2Q5SZK8 3169 aa6.46□□□□□ -1.38
CTDSPL2-201ENST00000260327 VPS13AQ96RL7 3174 aa6.45□□□□□ -1.38
CTDSPL2-201ENST00000260327 WDFY4Q6ZS81 3184 aa6.44□□□□□ -1.38
CTDSPL2-201ENST00000260327 FASNP49327 2511 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-201ENST00000260327 FAM229AH3BQW9 127 aa6.44□□□□□ -1.38
CTDSPL2-201ENST00000260327 OBSCN-AS1Q96MR7 158 aa6.44□□□□□ -1.38
CTDSPL2-201ENST00000260327 GIG44P09565 113 aaPredicted RBP6.44□□□□□ -1.38
CTDSPL2-201ENST00000260327 FAM229BQ4G0N7 80 aa6.44□□□□□ -1.38
CTDSPL2-201ENST00000260327 IGLV1-50A0A075B6I6 118 aa6.43□□□□□ -1.38
CTDSPL2-201ENST00000260327 KCNQ1DNQ9H478 68 aa6.43□□□□□ -1.38
CTDSPL2-201ENST00000260327 RBM12B-AS1Q9P1G2 102 aa6.43□□□□□ -1.38
CTDSPL2-201ENST00000260327 H3BNG1 76 aa6.42□□□□□ -1.38
CTDSPL2-201ENST00000260327 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
CTDSPL2-201ENST00000260327 TRANK1O15050 2925 aa6.42□□□□□ -1.38
CTDSPL2-201ENST00000260327 LINC00588Q9Y4M8 146 aa6.42□□□□□ -1.38
CTDSPL2-201ENST00000260327 MGAQ8IWI9 3026 aa6.42□□□□□ -1.38
CTDSPL2-201ENST00000260327 C16orf90A8MZG2 172 aa6.41□□□□□ -1.38
CTDSPL2-201ENST00000260327 C1orf134Q5TEV5 83 aa6.41□□□□□ -1.38
CTDSPL2-201ENST00000260327 USP24Q9UPU5 2620 aa6.41□□□□□ -1.38
CTDSPL2-201ENST00000260327 C8orf17Q9NRJ1 99 aa6.41□□□□□ -1.38
CTDSPL2-201ENST00000260327 Q96NJ1 140 aa6.4□□□□□ -1.38
CTDSPL2-201ENST00000260327 EPG5Q9HCE0 2579 aa6.4□□□□□ -1.38
CTDSPL2-201ENST00000260327 Q1T7F1 81 aa6.39□□□□□ -1.39
CTDSPL2-201ENST00000260327 DSCR10P59022 87 aa6.39□□□□□ -1.39
CTDSPL2-201ENST00000260327 FP248Q71RG6 208 aaPredicted RBP6.39□□□□□ -1.39
CTDSPL2-201ENST00000260327 A0A1W2PNM2 257 aa6.39□□□□□ -1.39
CTDSPL2-201ENST00000260327 VCANP13611 3396 aa6.38□□□□□ -1.39
CTDSPL2-201ENST00000260327 OCR1Q9BZK8 76 aa6.38□□□□□ -1.39
CTDSPL2-201ENST00000260327 C19orf73Q9NVV2 129 aa6.37□□□□□ -1.39
CTDSPL2-201ENST00000260327 C15orf56Q8N910 161 aa6.37□□□□□ -1.39
CTDSPL2-201ENST00000260327 PRR34Q9NV39 138 aa6.36□□□□□ -1.39
CTDSPL2-201ENST00000260327 APLNQ9ULZ1 77 aa6.36□□□□□ -1.39
CTDSPL2-201ENST00000260327 H3BS24 57 aa6.36□□□□□ -1.39
CTDSPL2-201ENST00000260327 FAM104AQ969W3 186 aa6.36□□□□□ -1.39
CTDSPL2-201ENST00000260327 LAMA1P25391 3075 aa6.34□□□□□ -1.39
CTDSPL2-201ENST00000260327 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
CTDSPL2-201ENST00000260327 OXTP01178 125 aa6.34□□□□□ -1.39
CTDSPL2-201ENST00000260327 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
CTDSPL2-201ENST00000260327 DNAH10OSP0CZ25 163 aa6.34□□□□□ -1.39
CTDSPL2-201ENST00000260327 A0A096LNT2 108 aa6.34□□□□□ -1.39
CTDSPL2-201ENST00000260327 CENPEQ02224 2701 aa6.33□□□□□ -1.4
CTDSPL2-201ENST00000260327 PRAC1Q96KF2 57 aa6.33□□□□□ -1.4
CTDSPL2-201ENST00000260327 PRR26Q8N8Z3 221 aa6.33□□□□□ -1.4
CTDSPL2-201ENST00000260327 FRYQ5TBA9 3013 aa6.33□□□□□ -1.4
CTDSPL2-201ENST00000260327 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
CTDSPL2-201ENST00000260327 RTL8CO15255 209 aa6.32□□□□□ -1.4
CTDSPL2-201ENST00000260327 M0R2T5 61 aa6.32□□□□□ -1.4
CTDSPL2-201ENST00000260327 SZT2Q5T011 3432 aa6.32□□□□□ -1.4
CTDSPL2-201ENST00000260327 KRTAP10-3P60369 221 aa6.31□□□□□ -1.4
CTDSPL2-201ENST00000260327 KRTAP24-1Q3LI83 254 aa6.31□□□□□ -1.4
CTDSPL2-201ENST00000260327 ANAPC11Q9NYG5 84 aa6.31□□□□□ -1.4
CTDSPL2-201ENST00000260327 TYMSOSQ8TAI1 123 aa6.31□□□□□ -1.4
CTDSPL2-201ENST00000260327 LINC00612Q8N6U2 182 aa6.3□□□□□ -1.4
CTDSPL2-201ENST00000260327 DSPP15924 2871 aaKnown RBP6.29□□□□□ -1.4
CTDSPL2-201ENST00000260327 LINC01554Q52M75 96 aa6.29□□□□□ -1.4
CTDSPL2-201ENST00000260327 C9orf163Q8N9P6 203 aa6.29□□□□□ -1.4
CTDSPL2-201ENST00000260327 CR1P17927 2039 aa6.29□□□□□ -1.4
CTDSPL2-201ENST00000260327 AKAP13Q12802 2813 aa6.28□□□□□ -1.4
CTDSPL2-201ENST00000260327 NBDYA0A0U1RRE5 68 aa6.28□□□□□ -1.4
CTDSPL2-201ENST00000260327 KRTAP10-11P60412 298 aa6.28□□□□□ -1.4
CTDSPL2-201ENST00000260327 NBEAQ8NFP9 2946 aa6.27□□□□□ -1.41
CTDSPL2-201ENST00000260327 MAP1AP78559 2803 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-201ENST00000260327 FLNAP21333 2647 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-201ENST00000260327 A0A0D9SG42 100 aa6.27□□□□□ -1.41
CTDSPL2-201ENST00000260327 Q75L30 129 aa6.27□□□□□ -1.41
CTDSPL2-201ENST00000260327 CASC10Q5T4H9 136 aa6.27□□□□□ -1.41
CTDSPL2-201ENST00000260327 PSORS1C2Q9UIG4 136 aa6.26□□□□□ -1.41
CTDSPL2-201ENST00000260327 IGLV5-48A0A075B6I7 105 aa6.26□□□□□ -1.41
CTDSPL2-201ENST00000260327 Q8N1X5 172 aa6.26□□□□□ -1.41
CTDSPL2-201ENST00000260327 HECTD1Q9ULT8 2610 aa6.25□□□□□ -1.41
CTDSPL2-201ENST00000260327 Q8N9P0 234 aaPredicted RBP6.25□□□□□ -1.41
CTDSPL2-201ENST00000260327 Q5VV11 94 aa6.24□□□□□ -1.41
CTDSPL2-201ENST00000260327 MGAM2Q2M2H8 2515 aa6.24□□□□□ -1.41
CTDSPL2-201ENST00000260327 CHD6Q8TD26 2715 aa6.24□□□□□ -1.41
CTDSPL2-201ENST00000260327 ITPR3Q14573 2671 aa6.23□□□□□ -1.41
CTDSPL2-201ENST00000260327 SPEGQ15772 3267 aa6.23□□□□□ -1.41
CTDSPL2-201ENST00000260327 C9orf92A6NGG3 77 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms