RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 LOC110117498A0A087WWA1 95 aa13.99□□□□□ -0.17
CLN6-201ENST00000249806 H3BQ85 93 aa13.99□□□□□ -0.17
CLN6-201ENST00000249806 DSCR8Q96T75 97 aa13.99□□□□□ -0.17
CLN6-201ENST00000249806 PLA2G2DQ9UNK4 145 aa13.99□□□□□ -0.17
CLN6-201ENST00000249806 CCDC179H3BU77 68 aa13.98□□□□□ -0.17
CLN6-201ENST00000249806 B9D2Q9BPU9 175 aa13.98□□□□□ -0.17
CLN6-201ENST00000249806 UBE2DNLQ8IWF7 75 aa13.97□□□□□ -0.17
CLN6-201ENST00000249806 DYNC2H1Q8NCM8 4307 aaKnown RBP13.96□□□□□ -0.17
CLN6-201ENST00000249806 IGLV1-50A0A075B6I6 118 aa13.94□□□□□ -0.18
CLN6-201ENST00000249806 FAM19A5Q7Z5A7 132 aaPredicted RBP13.94□□□□□ -0.18
CLN6-201ENST00000249806 LOC107984640A0A0U1RRK4 108 aa13.93□□□□□ -0.18
CLN6-201ENST00000249806 GHRHP01286 108 aa13.93□□□□□ -0.18
CLN6-201ENST00000249806 IGLV5-37A0A075B6J1 123 aa13.92□□□□□ -0.18
CLN6-201ENST00000249806 A0A087WVE0 104 aa13.92□□□□□ -0.18
CLN6-201ENST00000249806 PLECQ15149 4684 aaKnown RBP13.92□□□□□ -0.18
CLN6-201ENST00000249806 PSCAO43653 123 aa13.91□□□□□ -0.18
CLN6-201ENST00000249806 UBL5Q9BZL1 73 aa13.91□□□□□ -0.18
CLN6-201ENST00000249806 TRBV7-4A0A0J9YYF1 115 aa13.9□□□□□ -0.18
CLN6-201ENST00000249806 B5MCH6 92 aa13.89□□□□□ -0.19
CLN6-201ENST00000249806 KRTAP4-16G5E9R7 235 aaPredicted RBP13.89□□□□□ -0.19
CLN6-201ENST00000249806 DEFB105AQ8NG35 78 aa13.89□□□□□ -0.19
CLN6-201ENST00000249806 PDE6GP18545 87 aa13.88□□□□□ -0.19
CLN6-201ENST00000249806 MRPL55Q7Z7F7 128 aaKnown RBP13.88□□□□□ -0.19
CLN6-201ENST00000249806 HIST1H4AP62805 103 aaKnown RBP13.87□□□□□ -0.19
CLN6-201ENST00000249806 Q6ZRX8 168 aa13.87□□□□□ -0.19
CLN6-201ENST00000249806 Q9BRP9 147 aa13.87□□□□□ -0.19
CLN6-201ENST00000249806 PRYO14603 147 aa13.86□□□□□ -0.19
CLN6-201ENST00000249806 SPRR1AP35321 89 aa13.86□□□□□ -0.19
CLN6-201ENST00000249806 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.84□□□□□ -0.19
CLN6-201ENST00000249806 A0A096LNI7 61 aa13.84□□□□□ -0.19
CLN6-201ENST00000249806 ETDCA0A1B0GVM5 59 aa13.84□□□□□ -0.19
CLN6-201ENST00000249806 Q8N377 158 aa13.84□□□□□ -0.19
CLN6-201ENST00000249806 PRKDCP78527 4128 aaKnown RBP13.84□□□□□ -0.19
CLN6-201ENST00000249806 IGKV2-24A0A0C4DH68 120 aa13.84□□□□□ -0.19
CLN6-201ENST00000249806 CNBPP62633 177 aaKnown RBP13.83□□□□□ -0.2
CLN6-201ENST00000249806 ATP5EP2Q5VTU8 51 aa13.82□□□□□ -0.2
CLN6-201ENST00000249806 Q6ZVQ6 151 aa13.82□□□□□ -0.2
CLN6-201ENST00000249806 FAM19A1Q7Z5A9 133 aa13.82□□□□□ -0.2
CLN6-201ENST00000249806 DHRS4-AS1Q9P1J3 65 aa13.82□□□□□ -0.2
CLN6-201ENST00000249806 LINC01547P58512 204 aaPredicted RBP13.81□□□□□ -0.2
CLN6-201ENST00000249806 C16orf90A8MZG2 172 aa13.79□□□□□ -0.2
CLN6-201ENST00000249806 C3orf22Q8N5N4 141 aa13.79□□□□□ -0.2
CLN6-201ENST00000249806 A0A1W2PNN7 141 aa13.79□□□□□ -0.2
CLN6-201ENST00000249806 HAMPP81172 84 aa13.79□□□□□ -0.2
CLN6-201ENST00000249806 ST20-AS1Q8NBB2 130 aa13.79□□□□□ -0.2
CLN6-201ENST00000249806 ATOX1O00244 68 aa13.77□□□□□ -0.21
CLN6-201ENST00000249806 ERC2-IT1O76042 136 aa13.77□□□□□ -0.21
CLN6-201ENST00000249806 STARD9Q9P2P6 4700 aa13.77□□□□□ -0.21
CLN6-201ENST00000249806 NUPR2A6NF83 97 aa13.76□□□□□ -0.21
CLN6-201ENST00000249806 REG3GQ6UW15 175 aa13.76□□□□□ -0.21
CLN6-201ENST00000249806 NBDYA0A0U1RRE5 68 aa13.75□□□□□ -0.21
CLN6-201ENST00000249806 UBE2BP63146 152 aa13.74□□□□□ -0.21
CLN6-201ENST00000249806 CHTF8P0CG12 524 aa13.73□□□□□ -0.21
CLN6-201ENST00000249806 SS18L2Q9UHA2 77 aa13.72□□□□□ -0.21
CLN6-201ENST00000249806 LRCOL1A6NCL2 159 aa13.72□□□□□ -0.21
CLN6-201ENST00000249806 C14orf177Q52M58 125 aa13.72□□□□□ -0.21
CLN6-201ENST00000249806 IGLV5-48A0A075B6I7 105 aa13.71□□□□□ -0.22
CLN6-201ENST00000249806 UQCRQO14949 82 aa13.71□□□□□ -0.22
CLN6-201ENST00000249806 MEGF8Q7Z7M0 2845 aa13.7□□□□□ -0.22
CLN6-201ENST00000249806 COX7CP15954 63 aa13.7□□□□□ -0.22
CLN6-201ENST00000249806 SCXQ7RTU7 201 aa13.69□□□□□ -0.22
CLN6-201ENST00000249806 Q6ZRN7 208 aaPredicted RBP13.67□□□□□ -0.22
CLN6-201ENST00000249806 C9orf153Q5TBE3 101 aa13.67□□□□□ -0.22
CLN6-201ENST00000249806 C3orf84H3BNL1 204 aa13.66□□□□□ -0.22
CLN6-201ENST00000249806 CXCL6P80162 114 aa13.66□□□□□ -0.22
CLN6-201ENST00000249806 PRLHP81277 87 aa13.66□□□□□ -0.22
CLN6-201ENST00000249806 DNHD1Q96M86 4753 aa13.66□□□□□ -0.22
CLN6-201ENST00000249806 VPS13DQ5THJ4 4388 aa13.66□□□□□ -0.22
CLN6-201ENST00000249806 C9orf163Q8N9P6 203 aa13.66□□□□□ -0.22
CLN6-201ENST00000249806 TNP2Q05952 138 aa13.64□□□□□ -0.23
CLN6-201ENST00000249806 PHF5AQ7RTV0 110 aaKnown RBP13.64□□□□□ -0.23
CLN6-201ENST00000249806 KRTAP11-1Q8IUC1 163 aa13.64□□□□□ -0.23
CLN6-201ENST00000249806 SERP2Q8N6R1 65 aa13.63□□□□□ -0.23
CLN6-201ENST00000249806 KMT2AQ03164 3969 aa13.61□□□□□ -0.23
CLN6-201ENST00000249806 C1orf137Q5JT78 98 aa13.61□□□□□ -0.23
CLN6-201ENST00000249806 SRRM2Q9UQ35 2752 aaKnown RBP13.61□□□□□ -0.23
CLN6-201ENST00000249806 A0A1W2PNM2 257 aa13.6□□□□□ -0.23
CLN6-201ENST00000249806 NREPQ16612 68 aa13.59□□□□□ -0.23
CLN6-201ENST00000249806 SMIM29Q86T20 159 aa13.59□□□□□ -0.23
CLN6-201ENST00000249806 HIGD2AQ9BW72 106 aa13.59□□□□□ -0.23
CLN6-201ENST00000249806 PANO1I0J062 215 aa13.58□□□□□ -0.24
CLN6-201ENST00000249806 FUSP35637 526 aaKnown RBP eCLIP13.56□□□□□ -0.241e-9■■■■■ 32
CLN6-201ENST00000249806 CRYGAP11844 174 aa13.56□□□□□ -0.24
CLN6-201ENST00000249806 Q8N9L7 120 aa13.55□□□□□ -0.24
CLN6-201ENST00000249806 CYSTM1Q9H1C7 97 aa13.55□□□□□ -0.24
CLN6-201ENST00000249806 A0A0G2JQZ4 141 aa13.53□□□□□ -0.24
CLN6-201ENST00000249806 Q8NBF4 154 aa13.52□□□□□ -0.24
CLN6-201ENST00000249806 DPH3Q96FX2 82 aa13.52□□□□□ -0.24
CLN6-201ENST00000249806 DNAH2Q9P225 4427 aa13.52□□□□□ -0.25
CLN6-201ENST00000249806 EPM2AB3EWF7 344 aa13.51□□□□□ -0.25
CLN6-201ENST00000249806 LINC00476Q8WZB0 136 aa13.5□□□□□ -0.25
CLN6-201ENST00000249806 HECTD4Q9Y4D8 3996 aa13.49□□□□□ -0.25
CLN6-201ENST00000249806 BPY2O14599 106 aa13.49□□□□□ -0.25
CLN6-201ENST00000249806 LINC00474Q9P2X8 69 aa13.49□□□□□ -0.25
CLN6-201ENST00000249806 TGP01266 2768 aa13.49□□□□□ -0.25
CLN6-201ENST00000249806 SPRR4Q96PI1 79 aa13.48□□□□□ -0.25
CLN6-201ENST00000249806 A0A087WTM6 91 aa13.48□□□□□ -0.25
CLN6-201ENST00000249806 F8WEM9 126 aa13.47□□□□□ -0.25
CLN6-201ENST00000249806 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.47□□□□□ -0.25
CLN6-201ENST00000249806 A0A1B0GW54 56 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms