RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 HSBP1L1C9JCN9 74 aa14.39□□□□□ -0.11
SDF2L1-201ENST00000248958 TRAV23DV6A0A075B6W5 121 aa14.38□□□□□ -0.11
SDF2L1-201ENST00000248958 Q6ZVH6 145 aa14.38□□□□□ -0.11
SDF2L1-201ENST00000248958 ANAPC11Q9NYG5 84 aa14.38□□□□□ -0.11
SDF2L1-201ENST00000248958 C5orf52A6NGY3 159 aa14.37□□□□□ -0.11
SDF2L1-201ENST00000248958 B5MCH6 92 aa14.37□□□□□ -0.11
SDF2L1-201ENST00000248958 LINC00518Q8N0U6 118 aa14.37□□□□□ -0.11
SDF2L1-201ENST00000248958 PPDPFQ9H3Y8 114 aa14.37□□□□□ -0.11
SDF2L1-201ENST00000248958 IFITM1P13164 125 aa14.36□□□□□ -0.11
SDF2L1-201ENST00000248958 PCP2Q8IVA1 136 aa14.36□□□□□ -0.11
SDF2L1-201ENST00000248958 SMCR5Q8TEV8 140 aa14.35□□□□□ -0.11
SDF2L1-201ENST00000248958 SPRR4Q96PI1 79 aa14.35□□□□□ -0.11
SDF2L1-201ENST00000248958 JOSD1Q15040 202 aaPredicted RBP14.33□□□□□ -0.12
SDF2L1-201ENST00000248958 KRTAP13-2Q52LG2 175 aa14.33□□□□□ -0.12
SDF2L1-201ENST00000248958 Q6ZRX8 168 aa14.33□□□□□ -0.12
SDF2L1-201ENST00000248958 OR13C6PQ8NH95 151 aa14.33□□□□□ -0.12
SDF2L1-201ENST00000248958 ZNF73O43830 326 aaPredicted RBP14.32□□□□□ -0.12
SDF2L1-201ENST00000248958 HINT1P49773 126 aaPredicted RBP14.32□□□□□ -0.12
SDF2L1-201ENST00000248958 SCGB1D1O95968 90 aa14.3□□□□□ -0.12
SDF2L1-201ENST00000248958 Q9BRP9 147 aa14.26□□□□□ -0.13
SDF2L1-201ENST00000248958 MUSTN1Q8IVN3 82 aa14.25□□□□□ -0.13
SDF2L1-201ENST00000248958 CTAG1AP78358 180 aa14.24□□□□□ -0.13
SDF2L1-201ENST00000248958 LINC00483Q53H64 154 aa14.23□□□□□ -0.13
SDF2L1-201ENST00000248958 LINC00304Q8N9R0 145 aa14.23□□□□□ -0.13
SDF2L1-201ENST00000248958 ERC2-IT1O76042 136 aa14.21□□□□□ -0.13
SDF2L1-201ENST00000248958 C3orf22Q8N5N4 141 aa14.21□□□□□ -0.13
SDF2L1-201ENST00000248958 TSPAN13O95857 204 aa14.2□□□□□ -0.14
SDF2L1-201ENST00000248958 GAGE2AQ6NT46 116 aa14.2□□□□□ -0.14
SDF2L1-201ENST00000248958 DHRS4-AS1Q9P1J3 65 aa14.17□□□□□ -0.14
SDF2L1-201ENST00000248958 LRP2P98164 4655 aa14.16□□□□□ -0.14
SDF2L1-201ENST00000248958 TRAV13-2A0A0B4J235 113 aa14.16□□□□□ -0.14
SDF2L1-201ENST00000248958 A6NDN8 102 aa14.16□□□□□ -0.14
SDF2L1-201ENST00000248958 C6orf99Q4VX62 202 aa14.16□□□□□ -0.14
SDF2L1-201ENST00000248958 SPAG11AQ6PDA7 123 aa14.16□□□□□ -0.14
SDF2L1-201ENST00000248958 COX8AP10176 69 aa14.15□□□□□ -0.14
SDF2L1-201ENST00000248958 COX7BP24311 80 aa14.15□□□□□ -0.14
SDF2L1-201ENST00000248958 TRBV7-6A0A0J9YX20 115 aa14.14□□□□□ -0.15
SDF2L1-201ENST00000248958 ELOF1P60002 83 aaKnown RBP14.14□□□□□ -0.15
SDF2L1-201ENST00000248958 DLEU1O43261 78 aa14.12□□□□□ -0.15
SDF2L1-201ENST00000248958 PRR4Q16378 134 aa14.12□□□□□ -0.15
SDF2L1-201ENST00000248958 C4orf48Q5BLP8 95 aa14.11□□□□□ -0.15
SDF2L1-201ENST00000248958 A0A1B0GWB2 263 aa14.1□□□□□ -0.15
SDF2L1-201ENST00000248958 SSBP3-AS1Q7Z2R9 100 aa14.09□□□□□ -0.15
SDF2L1-201ENST00000248958 Q8NBF4 154 aa14.07□□□□□ -0.16
SDF2L1-201ENST00000248958 VAMP8Q9BV40 100 aa14.07□□□□□ -0.16
SDF2L1-201ENST00000248958 IGLV9-49A0A0B4J1Y8 123 aa14.06□□□□□ -0.16
SDF2L1-201ENST00000248958 A4D1N5 150 aa14.06□□□□□ -0.16
SDF2L1-201ENST00000248958 SPATA45Q537H7 98 aa14.06□□□□□ -0.16
SDF2L1-201ENST00000248958 ST20-AS1Q8NBB2 130 aa14.06□□□□□ -0.16
SDF2L1-201ENST00000248958 HIST1H4GQ99525 98 aa14.06□□□□□ -0.16
SDF2L1-201ENST00000248958 PAM16Q9Y3D7 125 aa14.06□□□□□ -0.16
SDF2L1-201ENST00000248958 SLC25A34Q6PIV7 304 aa14.05□□□□□ -0.16
SDF2L1-201ENST00000248958 SPRR1BP22528 89 aa14.04□□□□□ -0.16
SDF2L1-201ENST00000248958 MOBPQ13875 183 aa14.04□□□□□ -0.16
SDF2L1-201ENST00000248958 SMIM11BQ8TCY0 68 aa14.03□□□□□ -0.16
SDF2L1-201ENST00000248958 C14orf144Q96I85 54 aa14.02□□□□□ -0.17
SDF2L1-201ENST00000248958 SPINK1P00995 79 aa14.01□□□□□ -0.17
SDF2L1-201ENST00000248958 HIGD1BQ9P298 99 aa14.01□□□□□ -0.17
SDF2L1-201ENST00000248958 RNF213Q63HN8 5207 aa14□□□□□ -0.17
SDF2L1-201ENST00000248958 NHP2Q9NX24 153 aaKnown RBP14□□□□□ -0.17
SDF2L1-201ENST00000248958 VAMP3Q15836 100 aa13.99□□□□□ -0.17
SDF2L1-201ENST00000248958 C9orf153Q5TBE3 101 aa13.99□□□□□ -0.17
SDF2L1-201ENST00000248958 TAL2Q16559 108 aa13.98□□□□□ -0.17
SDF2L1-201ENST00000248958 LAMTOR3Q9UHA4 124 aa13.98□□□□□ -0.17
SDF2L1-201ENST00000248958 RPS29P62273 56 aaKnown RBP13.96□□□□□ -0.17
SDF2L1-201ENST00000248958 TEX49A0A1B0GTD5 131 aa13.95□□□□□ -0.18
SDF2L1-201ENST00000248958 RETNLBQ9BQ08 111 aa13.95□□□□□ -0.18
SDF2L1-201ENST00000248958 SLC25A20O43772 301 aa13.93□□□□□ -0.18
SDF2L1-201ENST00000248958 TMA7Q9Y2S6 64 aaKnown RBP13.93□□□□□ -0.18
SDF2L1-201ENST00000248958 PYY3Q5JQD4 70 aa13.92□□□□□ -0.18
SDF2L1-201ENST00000248958 LPAP08519 4548 aa13.91□□□□□ -0.18
SDF2L1-201ENST00000248958 DEFB105AQ8NG35 78 aa13.91□□□□□ -0.18
SDF2L1-201ENST00000248958 IGLV5-48A0A075B6I7 105 aa13.9□□□□□ -0.18
SDF2L1-201ENST00000248958 C12orf57Q99622 126 aa13.9□□□□□ -0.18
SDF2L1-201ENST00000248958 C2orf91Q6ZV80 131 aa13.89□□□□□ -0.19
SDF2L1-201ENST00000248958 FP248Q71RG6 208 aaPredicted RBP13.89□□□□□ -0.19
SDF2L1-201ENST00000248958 IGLV7-46A0A075B6I9 117 aa13.88□□□□□ -0.19
SDF2L1-201ENST00000248958 BVES-AS1Q5T3Y7 98 aa13.87□□□□□ -0.19
SDF2L1-201ENST00000248958 LINC00575Q6W349 94 aa13.87□□□□□ -0.19
SDF2L1-201ENST00000248958 LINC01547P58512 204 aaPredicted RBP13.86□□□□□ -0.19
SDF2L1-201ENST00000248958 RAB37Q96AX2 223 aa13.86□□□□□ -0.19
SDF2L1-201ENST00000248958 CFC1BP0CG36 223 aa13.85□□□□□ -0.19
SDF2L1-201ENST00000248958 CFC1P0CG37 223 aa13.85□□□□□ -0.19
SDF2L1-201ENST00000248958 A0A0B4J2C4 111 aa13.84□□□□□ -0.19
SDF2L1-201ENST00000248958 TPRXLQ17RH7 258 aa13.84□□□□□ -0.19
SDF2L1-201ENST00000248958 Q1RN00 199 aa13.84□□□□□ -0.19
SDF2L1-201ENST00000248958 CEND1Q8N111 149 aa13.84□□□□□ -0.19
SDF2L1-201ENST00000248958 TMEM238LA0A1B0GVL6 79 aa13.83□□□□□ -0.2
SDF2L1-201ENST00000248958 hADV29S1A0JD25 119 aa13.83□□□□□ -0.2
SDF2L1-201ENST00000248958 A6NJY4 79 aa13.83□□□□□ -0.2
SDF2L1-201ENST00000248958 SMIM29Q86T20 159 aa13.82□□□□□ -0.2
SDF2L1-201ENST00000248958 PRO1933Q9H354 126 aa13.82□□□□□ -0.2
SDF2L1-201ENST00000248958 Q8N377 158 aa13.81□□□□□ -0.2
SDF2L1-201ENST00000248958 H7C2G1 150 aa13.77□□□□□ -0.21
SDF2L1-201ENST00000248958 CD164Q04900 197 aa13.77□□□□□ -0.21
SDF2L1-201ENST00000248958 LIMD2Q9BT23 127 aa13.77□□□□□ -0.21
SDF2L1-201ENST00000248958 Q6ZQY7 126 aa13.76□□□□□ -0.21
SDF2L1-201ENST00000248958 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.75□□□□□ -0.21
SDF2L1-201ENST00000248958 CDIP1Q9H305 208 aa13.75□□□□□ -0.21
SDF2L1-201ENST00000248958 SNCGO76070 127 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms