RNA–Protein interactions for RNA: ENST00000220003.13

CSK-201, Transcript of C-terminal Src kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSK, Length 2,767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-201ENST00000220003 PDE6GP18545 87 aa12.4□□□□□ -0.43
CSK-201ENST00000220003 C1orf195Q5TG92 126 aa12.4□□□□□ -0.43
CSK-201ENST00000220003 KLK12Q9UKR0 248 aa12.38□□□□□ -0.43
CSK-201ENST00000220003 A0A0J9YWU9 116 aa12.38□□□□□ -0.43
CSK-201ENST00000220003 C10orf25Q5T742 122 aa12.37□□□□□ -0.43
CSK-201ENST00000220003 CHCHD10Q8WYQ3 142 aaPredicted RBP12.37□□□□□ -0.43
CSK-201ENST00000220003 A0A1B0GUV1 79 aa12.37□□□□□ -0.43
CSK-201ENST00000220003 REG3AQ06141 175 aa12.37□□□□□ -0.43
CSK-201ENST00000220003 CD164L2Q6UWJ8 174 aa12.36□□□□□ -0.43
CSK-201ENST00000220003 COL7A1Q02388 2944 aa12.35□□□□□ -0.43
CSK-201ENST00000220003 UNQ6190/PRO20217Q6UXQ8 127 aa12.35□□□□□ -0.43
CSK-201ENST00000220003 IGLV6-57P01721 117 aa12.35□□□□□ -0.43
CSK-201ENST00000220003 WFDC10BQ8IUB3 73 aa12.34□□□□□ -0.43
CSK-201ENST00000220003 PRYO14603 147 aa12.33□□□□□ -0.44
CSK-201ENST00000220003 V9GYY9 64 aa12.33□□□□□ -0.44
CSK-201ENST00000220003 STAB2Q8WWQ8 2551 aa12.32□□□□□ -0.44
CSK-201ENST00000220003 KPRPQ5T749 579 aaPredicted RBP12.32□□□□□ -0.44
CSK-201ENST00000220003 DNAH3Q8TD57 4116 aa12.32□□□□□ -0.44
CSK-201ENST00000220003 FUSP35637 526 aaKnown RBP eCLIP12.31□□□□□ -0.44
CSK-201ENST00000220003 EGFEM1PQ0D2K5 195 aa12.31□□□□□ -0.44
CSK-201ENST00000220003 LYSTQ99698 3801 aa12.31□□□□□ -0.44
CSK-201ENST00000220003 ESRGQ1W209 222 aa12.3□□□□□ -0.44
CSK-201ENST00000220003 DIRC1Q969H9 104 aa12.3□□□□□ -0.44
CSK-201ENST00000220003 TENM2Q9NT68 2774 aa12.29□□□□□ -0.44
CSK-201ENST00000220003 ERC2-IT1O76042 136 aa12.29□□□□□ -0.44
CSK-201ENST00000220003 SPAG11BQ08648 103 aa12.29□□□□□ -0.44
CSK-201ENST00000220003 IGKV4-1P06312 121 aa12.28□□□□□ -0.44
CSK-201ENST00000220003 SEC61GP60059 68 aa12.28□□□□□ -0.44
CSK-201ENST00000220003 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.28□□□□□ -0.44
CSK-201ENST00000220003 HIGD2AQ9BW72 106 aa12.28□□□□□ -0.44
CSK-201ENST00000220003 OCR1Q9BZK8 76 aa12.28□□□□□ -0.44
CSK-201ENST00000220003 XAGE1AQ9HD64 81 aa12.27□□□□□ -0.44
CSK-201ENST00000220003 LELP1Q5T871 98 aa12.27□□□□□ -0.45
CSK-201ENST00000220003 H3BQ85 93 aa12.26□□□□□ -0.45
CSK-201ENST00000220003 COX7BP24311 80 aa12.25□□□□□ -0.45
CSK-201ENST00000220003 HUWE1Q7Z6Z7 4374 aaKnown RBP12.25□□□□□ -0.45
CSK-201ENST00000220003 ZNF73O43830 326 aaPredicted RBP12.24□□□□□ -0.45
CSK-201ENST00000220003 DEFB131BA0A096LNP1 70 aa12.23□□□□□ -0.45
CSK-201ENST00000220003 C11orf45Q8TAV5 145 aa12.23□□□□□ -0.45
CSK-201ENST00000220003 LRCOL1A6NCL2 159 aa12.22□□□□□ -0.45
CSK-201ENST00000220003 HIGD2BQ4VC39 106 aa12.21□□□□□ -0.45
CSK-201ENST00000220003 C3orf84H3BNL1 204 aa12.21□□□□□ -0.46
CSK-201ENST00000220003 K7EIL1 84 aa12.2□□□□□ -0.46
CSK-201ENST00000220003 ELOF1P60002 83 aaKnown RBP12.2□□□□□ -0.46
CSK-201ENST00000220003 MDFIQ99750 246 aa12.2□□□□□ -0.46
CSK-201ENST00000220003 FAM30AQ9NZY2 134 aa12.18□□□□□ -0.46
CSK-201ENST00000220003 CSMD3Q7Z407 3707 aa12.17□□□□□ -0.46
CSK-201ENST00000220003 C6orf48Q9UBA6 75 aa12.16□□□□□ -0.46
CSK-201ENST00000220003 SMIM29Q86T20 159 aa12.14□□□□□ -0.47
CSK-201ENST00000220003 PRR34Q9NV39 138 aa12.14□□□□□ -0.47
CSK-201ENST00000220003 hDV103S1A0JD37 113 aa12.13□□□□□ -0.47
CSK-201ENST00000220003 Q6ZRP5 223 aa12.1□□□□□ -0.47
CSK-201ENST00000220003 IGKV2D-24A0A075B6R9 120 aa12.09□□□□□ -0.47
CSK-201ENST00000220003 LINC00528Q8N1L1 170 aa12.09□□□□□ -0.47
CSK-201ENST00000220003 VPREB1P12018 145 aa12.08□□□□□ -0.48
CSK-201ENST00000220003 C1orf64Q8NEQ6 169 aa12.08□□□□□ -0.48
CSK-201ENST00000220003 DEFB105AQ8NG35 78 aa12.08□□□□□ -0.48
CSK-201ENST00000220003 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
CSK-201ENST00000220003 GVQW2A0A096LPI5 108 aaPredicted RBP12.07□□□□□ -0.48
CSK-201ENST00000220003 PSPHP1O15172 72 aa12.07□□□□□ -0.48
CSK-201ENST00000220003 DNAH10Q8IVF4 4471 aa12.06□□□□□ -0.48
CSK-201ENST00000220003 CASC10Q5T4H9 136 aa12.06□□□□□ -0.48
CSK-201ENST00000220003 PMAIP1Q13794 54 aa12.04□□□□□ -0.48
CSK-201ENST00000220003 PRR4Q16378 134 aa12.04□□□□□ -0.48
CSK-201ENST00000220003 KRTAP26-1Q6PEX3 210 aa12.04□□□□□ -0.48
CSK-201ENST00000220003 LINC00588Q9Y4M8 146 aa12.04□□□□□ -0.48
CSK-201ENST00000220003 DNAH7Q8WXX0 4024 aa12.03□□□□□ -0.48
CSK-201ENST00000220003 M0R378 163 aa12.03□□□□□ -0.48
CSK-201ENST00000220003 Q1T7F1 81 aa12.03□□□□□ -0.48
CSK-201ENST00000220003 Q6ZRU5 148 aa12.02□□□□□ -0.49
CSK-201ENST00000220003 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.49
CSK-201ENST00000220003 C15orf56Q8N910 161 aa12.01□□□□□ -0.49
CSK-201ENST00000220003 DNAH9Q9NYC9 4486 aa12.01□□□□□ -0.49
CSK-201ENST00000220003 H3BNG1 76 aa12.01□□□□□ -0.49
CSK-201ENST00000220003 LCE6AA0A183 80 aa11.99□□□□□ -0.49
CSK-201ENST00000220003 TRAV22A0A0B4J277 110 aa11.98□□□□□ -0.49
CSK-201ENST00000220003 Q8N377 158 aa11.98□□□□□ -0.49
CSK-201ENST00000220003 DNHD1Q96M86 4753 aa11.97□□□□□ -0.49
CSK-201ENST00000220003 ZCCHC13Q8WW36 166 aaKnown RBP11.96□□□□□ -0.49
CSK-201ENST00000220003 LINC01556Q5JQF7 62 aa11.96□□□□□ -0.49
CSK-201ENST00000220003 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.95□□□□□ -0.5
CSK-201ENST00000220003 A0A1W2PNM2 257 aa11.95□□□□□ -0.5
CSK-201ENST00000220003 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
CSK-201ENST00000220003 ST20-AS1Q8NBB2 130 aa11.93□□□□□ -0.5
CSK-201ENST00000220003 PRKDCP78527 4128 aaKnown RBP11.93□□□□□ -0.5
CSK-201ENST00000220003 IGLV5-48A0A075B6I7 105 aa11.92□□□□□ -0.5
CSK-201ENST00000220003 K7EQZ3 153 aa11.92□□□□□ -0.5
CSK-201ENST00000220003 A8MU10 97 aa11.91□□□□□ -0.5
CSK-201ENST00000220003 A8MUN3 132 aa11.91□□□□□ -0.5
CSK-201ENST00000220003 DNAH1Q9P2D7 4330 aa11.9□□□□□ -0.5
CSK-201ENST00000220003 DSCR10P59022 87 aa11.9□□□□□ -0.5
CSK-201ENST00000220003 MEGF8Q7Z7M0 2845 aa11.9□□□□□ -0.5
CSK-201ENST00000220003 DNAH10OSP0CZ25 163 aa11.89□□□□□ -0.51
CSK-201ENST00000220003 PSCAO43653 123 aa11.88□□□□□ -0.51
CSK-201ENST00000220003 C1orf137Q5JT78 98 aa11.88□□□□□ -0.51
CSK-201ENST00000220003 KRTAP1-5Q9BYS1 174 aa11.88□□□□□ -0.51
CSK-201ENST00000220003 PLECQ15149 4684 aaKnown RBP11.87□□□□□ -0.51
CSK-201ENST00000220003 CYP4F30PQ9H0H9 118 aa11.86□□□□□ -0.51
CSK-201ENST00000220003 FAM168BA1KXE4 195 aa11.85□□□□□ -0.51
CSK-201ENST00000220003 Q8NBF4 154 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms