RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 RPL13AP40429 203 aaKnown RBP16.75■□□□□ 0.27
CHMP4B-201ENST00000217402 KRTAP10-4P60372 401 aaPredicted RBP16.75■□□□□ 0.27
CHMP4B-201ENST00000217402 BCE1O60756 84 aa16.74■□□□□ 0.27
CHMP4B-201ENST00000217402 M0R143 59 aa16.72■□□□□ 0.27
CHMP4B-201ENST00000217402 ZNF73O43830 326 aaPredicted RBP16.72■□□□□ 0.27
CHMP4B-201ENST00000217402 CBY1Q9Y3M2 126 aa16.72■□□□□ 0.27
CHMP4B-201ENST00000217402 K7ERJ3 54 aa16.71■□□□□ 0.27
CHMP4B-201ENST00000217402 IGLV7-43P04211 117 aa16.71■□□□□ 0.27
CHMP4B-201ENST00000217402 FAM19A1Q7Z5A9 133 aa16.71■□□□□ 0.27
CHMP4B-201ENST00000217402 HERC2O95714 4834 aa16.71■□□□□ 0.27
CHMP4B-201ENST00000217402 H7C2G1 150 aa16.7■□□□□ 0.26
CHMP4B-201ENST00000217402 SPRR1AP35321 89 aa16.7■□□□□ 0.26
CHMP4B-201ENST00000217402 ETDCA0A1B0GVM5 59 aa16.69■□□□□ 0.26
CHMP4B-201ENST00000217402 UBE2AP49459 152 aa16.69■□□□□ 0.26
CHMP4B-201ENST00000217402 PRLHP81277 87 aa16.69■□□□□ 0.26
CHMP4B-201ENST00000217402 SMIM11BQ8TCY0 68 aa16.69■□□□□ 0.26
CHMP4B-201ENST00000217402 DIRC1Q969H9 104 aa16.67■□□□□ 0.26
CHMP4B-201ENST00000217402 PRO1854Q9UHT4 67 aa16.67■□□□□ 0.26
CHMP4B-201ENST00000217402 KRTAP4-16G5E9R7 235 aaPredicted RBP16.67■□□□□ 0.26
CHMP4B-201ENST00000217402 C6orf99Q4VX62 202 aa16.67■□□□□ 0.26
CHMP4B-201ENST00000217402 SRRM2Q9UQ35 2752 aaKnown RBP16.66■□□□□ 0.26
CHMP4B-201ENST00000217402 A0A1B0GWB2 263 aa16.65■□□□□ 0.26
CHMP4B-201ENST00000217402 PCP4L1A6NKN8 68 aa16.65■□□□□ 0.26
CHMP4B-201ENST00000217402 BATFQ16520 125 aa16.65■□□□□ 0.26
CHMP4B-201ENST00000217402 KRTAP4-5Q9BYR2 181 aa16.64■□□□□ 0.25
CHMP4B-201ENST00000217402 Q1RN00 199 aa16.63■□□□□ 0.25
CHMP4B-201ENST00000217402 B5MCH6 92 aa16.62■□□□□ 0.25
CHMP4B-201ENST00000217402 ZNF861PO60384 105 aa16.62■□□□□ 0.25
CHMP4B-201ENST00000217402 RPL28P46779 137 aaKnown RBP16.62■□□□□ 0.25
CHMP4B-201ENST00000217402 KRTAP13-1Q8IUC0 172 aa16.62■□□□□ 0.25
CHMP4B-201ENST00000217402 Q6ZRX8 168 aa16.59■□□□□ 0.25
CHMP4B-201ENST00000217402 COX7BP24311 80 aa16.57■□□□□ 0.24
CHMP4B-201ENST00000217402 HIGD2AQ9BW72 106 aa16.57■□□□□ 0.24
CHMP4B-201ENST00000217402 H0Y9J4 135 aa16.56■□□□□ 0.24
CHMP4B-201ENST00000217402 ELOF1P60002 83 aaKnown RBP16.56■□□□□ 0.24
CHMP4B-201ENST00000217402 SPINK6Q6UWN8 80 aa16.54■□□□□ 0.24
CHMP4B-201ENST00000217402 TSPAN13O95857 204 aa16.53■□□□□ 0.24
CHMP4B-201ENST00000217402 Q9BRP9 147 aa16.53■□□□□ 0.24
CHMP4B-201ENST00000217402 TRBV7-6A0A0J9YX20 115 aa16.52■□□□□ 0.24
CHMP4B-201ENST00000217402 SMCR5Q8TEV8 140 aa16.52■□□□□ 0.23
CHMP4B-201ENST00000217402 VAMP3Q15836 100 aa16.51■□□□□ 0.23
CHMP4B-201ENST00000217402 SNHG12Q9BXW3 62 aa16.48■□□□□ 0.23
CHMP4B-201ENST00000217402 TRIAP1O43715 76 aa16.48■□□□□ 0.23
CHMP4B-201ENST00000217402 PSMB2P49721 201 aa16.48■□□□□ 0.23
CHMP4B-201ENST00000217402 ERC2-IT1O76042 136 aa16.46■□□□□ 0.23
CHMP4B-201ENST00000217402 INAFM2P0DMQ5 153 aa16.46■□□□□ 0.23
CHMP4B-201ENST00000217402 DHRS4-AS1Q9P1J3 65 aa16.45■□□□□ 0.22
CHMP4B-201ENST00000217402 PKHD1L1Q86WI1 4243 aa16.43■□□□□ 0.22
CHMP4B-201ENST00000217402 NAA38Q9BRA0 125 aaKnown RBP16.42■□□□□ 0.22
CHMP4B-201ENST00000217402 ABCA13Q86UQ4 5058 aa16.41■□□□□ 0.22
CHMP4B-201ENST00000217402 LINC00575Q6W349 94 aa16.4■□□□□ 0.22
CHMP4B-201ENST00000217402 H0YGX0 51 aa16.37■□□□□ 0.21
CHMP4B-201ENST00000217402 SLC25A20O43772 301 aa16.37■□□□□ 0.21
CHMP4B-201ENST00000217402 COX6CP09669 75 aa16.37■□□□□ 0.21
CHMP4B-201ENST00000217402 ST20-AS1Q8NBB2 130 aa16.36■□□□□ 0.21
CHMP4B-201ENST00000217402 FAM218AQ96MZ4 157 aa16.36■□□□□ 0.21
CHMP4B-201ENST00000217402 FLG2Q5D862 2391 aaPredicted RBP16.35■□□□□ 0.21
CHMP4B-201ENST00000217402 CLEC2BQ92478 149 aa16.35■□□□□ 0.21
CHMP4B-201ENST00000217402 hADV29S1A0JD25 119 aa16.34■□□□□ 0.21
CHMP4B-201ENST00000217402 TAX1BP3O14907 124 aa16.34■□□□□ 0.21
CHMP4B-201ENST00000217402 SCGB1C2P0DMR2 95 aa16.34■□□□□ 0.21
CHMP4B-201ENST00000217402 SPRR4Q96PI1 79 aa16.34■□□□□ 0.21
CHMP4B-201ENST00000217402 ZNF706Q9Y5V0 76 aaPredicted RBP16.34■□□□□ 0.21
CHMP4B-201ENST00000217402 KRTAP1-4P0C5Y4 121 aa16.32■□□□□ 0.2
CHMP4B-201ENST00000217402 ANAPC11Q9NYG5 84 aa16.32■□□□□ 0.2
CHMP4B-201ENST00000217402 COL5A1-AS1Q5SY13 56 aa16.31■□□□□ 0.2
CHMP4B-201ENST00000217402 H3BUT2 72 aa16.3■□□□□ 0.2
CHMP4B-201ENST00000217402 GAGE2AQ6NT46 116 aa16.3■□□□□ 0.2
CHMP4B-201ENST00000217402 C9orf118A6NHY6 69 aa16.27■□□□□ 0.2
CHMP4B-201ENST00000217402 DEFB105AQ8NG35 78 aa16.27■□□□□ 0.2
CHMP4B-201ENST00000217402 Q6ZQY7 126 aa16.27■□□□□ 0.19
CHMP4B-201ENST00000217402 SNCGO76070 127 aa16.26■□□□□ 0.19
CHMP4B-201ENST00000217402 MYCBP2O75592 4640 aa16.25■□□□□ 0.19
CHMP4B-201ENST00000217402 LINC00483Q53H64 154 aa16.22■□□□□ 0.19
CHMP4B-201ENST00000217402 A0A1B0GX51 115 aa16.21■□□□□ 0.19
CHMP4B-201ENST00000217402 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.21■□□□□ 0.19
CHMP4B-201ENST00000217402 A0A087X002 238 aa16.2■□□□□ 0.18
CHMP4B-201ENST00000217402 LRP1Q07954 4544 aaKnown RBP16.2■□□□□ 0.18
CHMP4B-201ENST00000217402 LYRM7Q5U5X0 104 aa16.19■□□□□ 0.18
CHMP4B-201ENST00000217402 PRR26Q8N8Z3 221 aa16.19■□□□□ 0.18
CHMP4B-201ENST00000217402 LINC01600Q96MT4 127 aa16.19■□□□□ 0.18
CHMP4B-201ENST00000217402 LST1O00453 97 aa16.19■□□□□ 0.18
CHMP4B-201ENST00000217402 LINC01547P58512 204 aaPredicted RBP16.19■□□□□ 0.18
CHMP4B-201ENST00000217402 IGLV5-48A0A075B6I7 105 aa16.18■□□□□ 0.18
CHMP4B-201ENST00000217402 A0A1W2PPM0 123 aa16.18■□□□□ 0.18
CHMP4B-201ENST00000217402 FAM229BQ4G0N7 80 aa16.18■□□□□ 0.18
CHMP4B-201ENST00000217402 TEX49A0A1B0GTD5 131 aa16.17■□□□□ 0.18
CHMP4B-201ENST00000217402 TCL1BO95988 128 aa16.17■□□□□ 0.18
CHMP4B-201ENST00000217402 DNAL4O96015 105 aa16.17■□□□□ 0.18
CHMP4B-201ENST00000217402 PCLOQ9Y6V0 5065 aa16.17■□□□□ 0.18
CHMP4B-201ENST00000217402 CRYGAP11844 174 aa16.16■□□□□ 0.18
CHMP4B-201ENST00000217402 SPRR1BP22528 89 aa16.16■□□□□ 0.18
CHMP4B-201ENST00000217402 Q8N377 158 aa16.15■□□□□ 0.18
CHMP4B-201ENST00000217402 FAT3Q8TDW7 4589 aa16.14■□□□□ 0.17
CHMP4B-201ENST00000217402 OXTP01178 125 aa16.14■□□□□ 0.17
CHMP4B-201ENST00000217402 FABP2P12104 132 aa16.14■□□□□ 0.17
CHMP4B-201ENST00000217402 TRACP01848 142 aa16.13■□□□□ 0.17
CHMP4B-201ENST00000217402 ATXN8Q156A1 80 aa16.13■□□□□ 0.17
CHMP4B-201ENST00000217402 KRTAP13-2Q52LG2 175 aa16.12■□□□□ 0.17
CHMP4B-201ENST00000217402 C3orf22Q8N5N4 141 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms