RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 COX17Q14061 63 aa3.97□□□□□ -1.77
SCARB2-218ENST00000639715 Q8IZM0 81 aa3.97□□□□□ -1.77
SCARB2-218ENST00000639715 DIRC1Q969H9 104 aa3.97□□□□□ -1.77
SCARB2-218ENST00000639715 ESM1Q9NQ30 184 aa3.97□□□□□ -1.77
SCARB2-218ENST00000639715 PRR3P79522 188 aaKnown RBP3.96□□□□□ -1.77
SCARB2-218ENST00000639715 LIMD2Q9BT23 127 aa3.96□□□□□ -1.77
SCARB2-218ENST00000639715 LOC100131303A0A0U1RQF7 123 aa3.96□□□□□ -1.78
SCARB2-218ENST00000639715 NDUFB1O75438 58 aa3.96□□□□□ -1.78
SCARB2-218ENST00000639715 LCA10Q71F78 164 aa3.96□□□□□ -1.78
SCARB2-218ENST00000639715 IGKV2D-24A0A075B6R9 120 aa3.96□□□□□ -1.78
SCARB2-218ENST00000639715 ATP11AUNQ6ZP68 121 aa3.96□□□□□ -1.78
SCARB2-218ENST00000639715 REV3LO60673 3130 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 A8MTW9 85 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 C3orf84H3BNL1 204 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 SYCNQ0VAF6 134 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 SPATA3Q8NHX4 192 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 C22orf24Q9Y442 160 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 IGKV2-28A0A075B6P5 120 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 hDV103S1A0JD37 113 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 DEFB4AO15263 64 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 ERC2-IT1O76042 136 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 FSHBP01225 129 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 IGKV2D-28P01615 120 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 Q6ZQT0 140 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 WFDC10AQ9H1F0 79 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 Q1T7F1 81 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 TRBV7-4A0A0J9YYF1 115 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 C7orf65Q6ZTY9 151 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 OBSCN-AS1Q96MR7 158 aa3.95□□□□□ -1.78
SCARB2-218ENST00000639715 A0A1B0GUV1 79 aa3.94□□□□□ -1.78
SCARB2-218ENST00000639715 DEFB105AQ8NG35 78 aa3.94□□□□□ -1.78
SCARB2-218ENST00000639715 COX7BP24311 80 aa3.94□□□□□ -1.78
SCARB2-218ENST00000639715 LELP1Q5T871 98 aa3.94□□□□□ -1.78
SCARB2-218ENST00000639715 MUC4Q99102 2169 aa3.94□□□□□ -1.78
SCARB2-218ENST00000639715 Q6ZRP5 223 aa3.94□□□□□ -1.78
SCARB2-218ENST00000639715 CDH23Q9H251 3354 aa3.94□□□□□ -1.78
SCARB2-218ENST00000639715 OXLD1Q5BKU9 147 aa3.93□□□□□ -1.78
SCARB2-218ENST00000639715 PSCAO43653 123 aa3.93□□□□□ -1.78
SCARB2-218ENST00000639715 ZFHX4Q86UP3 3567 aa3.93□□□□□ -1.78
SCARB2-218ENST00000639715 IGLV4-60A0A075B6I1 120 aa3.93□□□□□ -1.78
SCARB2-218ENST00000639715 LINC00588Q9Y4M8 146 aa3.93□□□□□ -1.78
SCARB2-218ENST00000639715 XIRP2A4UGR9 3374 aa3.93□□□□□ -1.78
SCARB2-218ENST00000639715 C8orf87E5RJ46 101 aa3.93□□□□□ -1.78
SCARB2-218ENST00000639715 ETDCA0A1B0GVM5 59 aa3.92□□□□□ -1.78
SCARB2-218ENST00000639715 B9D2Q9BPU9 175 aa3.92□□□□□ -1.78
SCARB2-218ENST00000639715 EPG5Q9HCE0 2579 aa3.92□□□□□ -1.78
SCARB2-218ENST00000639715 CFAP54Q96N23 3096 aa3.92□□□□□ -1.78
SCARB2-218ENST00000639715 CASC2Q6XLA1 102 aa3.92□□□□□ -1.78
SCARB2-218ENST00000639715 LINC00208Q96KT6 92 aa3.92□□□□□ -1.78
SCARB2-218ENST00000639715 MUC3AQ02505 3323 aa3.92□□□□□ -1.78
SCARB2-218ENST00000639715 IGHV3OR16-9A0A0B4J2B5 98 aa3.91□□□□□ -1.78
SCARB2-218ENST00000639715 SMIM29Q86T20 159 aa3.91□□□□□ -1.78
SCARB2-218ENST00000639715 LINC00575Q6W349 94 aa3.91□□□□□ -1.78
SCARB2-218ENST00000639715 FBN3Q75N90 2809 aa3.91□□□□□ -1.78
SCARB2-218ENST00000639715 LOC110117498A0A087WWA1 95 aa3.91□□□□□ -1.78
SCARB2-218ENST00000639715 Q6ZTC4 211 aa3.91□□□□□ -1.78
SCARB2-218ENST00000639715 LY6G6DO95868 133 aa3.9□□□□□ -1.78
SCARB2-218ENST00000639715 NBEAQ8NFP9 2946 aa3.9□□□□□ -1.78
SCARB2-218ENST00000639715 GCN1Q92616 2671 aaKnown RBP3.9□□□□□ -1.79
SCARB2-218ENST00000639715 M0R2N4 97 aa3.9□□□□□ -1.79
SCARB2-218ENST00000639715 CYP4F30PQ9H0H9 118 aa3.9□□□□□ -1.79
SCARB2-218ENST00000639715 FREM2Q5SZK8 3169 aa3.89□□□□□ -1.79
SCARB2-218ENST00000639715 A0A096LNT2 108 aa3.89□□□□□ -1.79
SCARB2-218ENST00000639715 INAFM1C9JVW0 142 aa3.89□□□□□ -1.79
SCARB2-218ENST00000639715 C16orf90A8MZG2 172 aa3.89□□□□□ -1.79
SCARB2-218ENST00000639715 C9orf116Q5BN46 136 aaPredicted RBP3.89□□□□□ -1.79
SCARB2-218ENST00000639715 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.89□□□□□ -1.79
SCARB2-218ENST00000639715 WFDC13Q8IUB5 93 aa3.89□□□□□ -1.79
SCARB2-218ENST00000639715 MAST4O15021 2626 aa3.89□□□□□ -1.79
SCARB2-218ENST00000639715 XAGE1AQ9HD64 81 aa3.89□□□□□ -1.79
SCARB2-218ENST00000639715 ACANP16112 2415 aa3.89□□□□□ -1.79
SCARB2-218ENST00000639715 WFDC10BQ8IUB3 73 aa3.88□□□□□ -1.79
SCARB2-218ENST00000639715 MGAQ8IWI9 3026 aa3.88□□□□□ -1.79
SCARB2-218ENST00000639715 KPRPQ5T749 579 aaPredicted RBP3.88□□□□□ -1.79
SCARB2-218ENST00000639715 LAMA1P25391 3075 aa3.88□□□□□ -1.79
SCARB2-218ENST00000639715 DEFB131BA0A096LNP1 70 aa3.88□□□□□ -1.79
SCARB2-218ENST00000639715 EGFEM1PQ0D2K5 195 aa3.88□□□□□ -1.79
SCARB2-218ENST00000639715 UNQ6190/PRO20217Q6UXQ8 127 aa3.88□□□□□ -1.79
SCARB2-218ENST00000639715 A0A0J9YWU9 116 aa3.87□□□□□ -1.79
SCARB2-218ENST00000639715 VPS13AQ96RL7 3174 aa3.87□□□□□ -1.79
SCARB2-218ENST00000639715 OCR1Q9BZK8 76 aa3.87□□□□□ -1.79
SCARB2-218ENST00000639715 SETXQ7Z333 2677 aaKnown RBP3.87□□□□□ -1.79
SCARB2-218ENST00000639715 UBR5O95071 2799 aaPredicted RBP3.87□□□□□ -1.79
SCARB2-218ENST00000639715 A8MU10 97 aa3.86□□□□□ -1.79
SCARB2-218ENST00000639715 IGHV4-30-4P0DP06 118 aa3.86□□□□□ -1.79
SCARB2-218ENST00000639715 Q5VV11 94 aa3.86□□□□□ -1.79
SCARB2-218ENST00000639715 DEFB116Q30KQ4 102 aa3.86□□□□□ -1.79
SCARB2-218ENST00000639715 LINC01554Q52M75 96 aa3.86□□□□□ -1.79
SCARB2-218ENST00000639715 SPAG11AQ6PDA7 123 aa3.86□□□□□ -1.79
SCARB2-218ENST00000639715 CDK2AP2O75956 126 aa3.85□□□□□ -1.79
SCARB2-218ENST00000639715 DHRS4-AS1Q9P1J3 65 aa3.85□□□□□ -1.79
SCARB2-218ENST00000639715 ZNF706Q9Y5V0 76 aaPredicted RBP3.85□□□□□ -1.79
SCARB2-218ENST00000639715 VCANP13611 3396 aa3.85□□□□□ -1.79
SCARB2-218ENST00000639715 LOC101927531A0A1B0GV80 90 aa3.85□□□□□ -1.79
SCARB2-218ENST00000639715 RETNLBQ9BQ08 111 aa3.85□□□□□ -1.79
SCARB2-218ENST00000639715 IGKV4-1P06312 121 aa3.85□□□□□ -1.79
SCARB2-218ENST00000639715 PHF5AQ7RTV0 110 aaKnown RBP3.85□□□□□ -1.79
SCARB2-218ENST00000639715 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
SCARB2-218ENST00000639715 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
SCARB2-218ENST00000639715 DSPP15924 2871 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms