RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 IL17DQ8TAD2 202 aa10.02□□□□□ -0.81
SCARB2-216ENST00000639300 NDUFC2-KCTD14E9PQ53 114 aa10.02□□□□□ -0.81
SCARB2-216ENST00000639300 NDUFC2O95298 119 aa10.02□□□□□ -0.81
SCARB2-216ENST00000639300 Q6ZRU5 148 aa10.02□□□□□ -0.81
SCARB2-216ENST00000639300 X6R8D5 127 aa10.01□□□□□ -0.81
SCARB2-216ENST00000639300 CFAP47Q6ZTR5 3102 aa10□□□□□ -0.81
SCARB2-216ENST00000639300 DMXL2Q8TDJ6 3036 aa10□□□□□ -0.81
SCARB2-216ENST00000639300 FAM218AQ96MZ4 157 aa9.99□□□□□ -0.81
SCARB2-216ENST00000639300 PRR4Q16378 134 aa9.98□□□□□ -0.81
SCARB2-216ENST00000639300 C4orf48Q5BLP8 95 aa9.98□□□□□ -0.81
SCARB2-216ENST00000639300 ZZEF1O43149 2961 aa9.98□□□□□ -0.81
SCARB2-216ENST00000639300 LINC00575Q6W349 94 aa9.98□□□□□ -0.81
SCARB2-216ENST00000639300 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
SCARB2-216ENST00000639300 C10orf25Q5T742 122 aa9.98□□□□□ -0.81
SCARB2-216ENST00000639300 MPLKIPQ8TAP9 179 aa9.98□□□□□ -0.81
SCARB2-216ENST00000639300 KALRNO60229 2985 aa9.98□□□□□ -0.81
SCARB2-216ENST00000639300 IGKV4-1P06312 121 aa9.97□□□□□ -0.81
SCARB2-216ENST00000639300 M0QXV9 152 aa9.97□□□□□ -0.81
SCARB2-216ENST00000639300 FLNCQ14315 2725 aa9.96□□□□□ -0.81
SCARB2-216ENST00000639300 EIF4EBP3O60516 100 aaPredicted RBP9.96□□□□□ -0.81
SCARB2-216ENST00000639300 HRCT1Q6UXD1 115 aa9.96□□□□□ -0.81
SCARB2-216ENST00000639300 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.81
SCARB2-216ENST00000639300 C1orf137Q5JT78 98 aa9.96□□□□□ -0.82
SCARB2-216ENST00000639300 COL12A1Q99715 3063 aa9.95□□□□□ -0.82
SCARB2-216ENST00000639300 A0A096LNT2 108 aa9.95□□□□□ -0.82
SCARB2-216ENST00000639300 LITAFQ99732 161 aa9.94□□□□□ -0.82
SCARB2-216ENST00000639300 ESRGQ1W209 222 aa9.94□□□□□ -0.82
SCARB2-216ENST00000639300 GCN1Q92616 2671 aaKnown RBP9.94□□□□□ -0.82
SCARB2-216ENST00000639300 TACC2O95359 2948 aa9.94□□□□□ -0.82
SCARB2-216ENST00000639300 LINC01561Q8N1V8 128 aa9.94□□□□□ -0.82
SCARB2-216ENST00000639300 NOTCH1P46531 2555 aa9.94□□□□□ -0.82
SCARB2-216ENST00000639300 STAB1Q9NY15 2570 aa9.94□□□□□ -0.82
SCARB2-216ENST00000639300 PLAC8L1A1L4L8 177 aa9.93□□□□□ -0.82
SCARB2-216ENST00000639300 IGLV9-49A0A0B4J1Y8 123 aa9.93□□□□□ -0.82
SCARB2-216ENST00000639300 C2orf48Q96LS8 159 aa9.92□□□□□ -0.82
SCARB2-216ENST00000639300 SETXQ7Z333 2677 aaKnown RBP9.92□□□□□ -0.82
SCARB2-216ENST00000639300 CHKB-CPT1BH3BT56 60 aa9.92□□□□□ -0.82
SCARB2-216ENST00000639300 UBR5O95071 2799 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-216ENST00000639300 IGSF10Q6WRI0 2623 aa9.91□□□□□ -0.82
SCARB2-216ENST00000639300 BRK1Q8WUW1 75 aa9.91□□□□□ -0.82
SCARB2-216ENST00000639300 FAM30AQ9NZY2 134 aa9.91□□□□□ -0.82
SCARB2-216ENST00000639300 C6orf48Q9UBA6 75 aa9.9□□□□□ -0.82
SCARB2-216ENST00000639300 MYO15AQ9UKN7 3530 aa9.9□□□□□ -0.82
SCARB2-216ENST00000639300 Q6ZVQ6 151 aa9.9□□□□□ -0.82
SCARB2-216ENST00000639300 LY6G6CO95867 125 aa9.9□□□□□ -0.82
SCARB2-216ENST00000639300 SBSPONQ8IVN8 264 aa9.9□□□□□ -0.83
SCARB2-216ENST00000639300 REG3GQ6UW15 175 aa9.89□□□□□ -0.83
SCARB2-216ENST00000639300 NBEAL2Q6ZNJ1 2754 aa9.88□□□□□ -0.83
SCARB2-216ENST00000639300 ZNF575Q86XF7 245 aa9.88□□□□□ -0.83
SCARB2-216ENST00000639300 COL6A5A8TX70 2615 aa9.88□□□□□ -0.83
SCARB2-216ENST00000639300 TRAV7A0A075B6U4 112 aa9.87□□□□□ -0.83
SCARB2-216ENST00000639300 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
SCARB2-216ENST00000639300 Q8NAQ8 132 aa9.87□□□□□ -0.83
SCARB2-216ENST00000639300 SPTBN5Q9NRC6 3674 aaKnown RBP9.87□□□□□ -0.83
SCARB2-216ENST00000639300 DEFB116Q30KQ4 102 aa9.87□□□□□ -0.83
SCARB2-216ENST00000639300 Q8N9L7 120 aa9.87□□□□□ -0.83
SCARB2-216ENST00000639300 PRLHP81277 87 aa9.86□□□□□ -0.83
SCARB2-216ENST00000639300 TRBV7-7A0A0K0K1E9 115 aa9.85□□□□□ -0.83
SCARB2-216ENST00000639300 CSNK1G2-AS1Q8NCQ2 148 aa9.85□□□□□ -0.83
SCARB2-216ENST00000639300 UNC79Q9P2D8 2635 aa9.85□□□□□ -0.83
SCARB2-216ENST00000639300 GIG44P09565 113 aaPredicted RBP9.85□□□□□ -0.83
SCARB2-216ENST00000639300 LINC01547P58512 204 aaPredicted RBP9.85□□□□□ -0.83
SCARB2-216ENST00000639300 A0A087WSZ3 146 aa9.84□□□□□ -0.83
SCARB2-216ENST00000639300 NDUFC1O43677 76 aa9.84□□□□□ -0.83
SCARB2-216ENST00000639300 KRTAP24-1Q3LI83 254 aa9.84□□□□□ -0.83
SCARB2-216ENST00000639300 LINC01556Q5JQF7 62 aa9.84□□□□□ -0.83
SCARB2-216ENST00000639300 C7orf33Q8WU49 177 aa9.84□□□□□ -0.83
SCARB2-216ENST00000639300 C22orf24Q9Y442 160 aa9.84□□□□□ -0.83
SCARB2-216ENST00000639300 LINC00474Q9P2X8 69 aa9.82□□□□□ -0.84
SCARB2-216ENST00000639300 SPATA3Q8NHX4 192 aa9.81□□□□□ -0.84
SCARB2-216ENST00000639300 LOC400499M0QZD8 3231 aa9.81□□□□□ -0.84
SCARB2-216ENST00000639300 ITPR1Q14643 2758 aa9.81□□□□□ -0.84
SCARB2-216ENST00000639300 C19orf73Q9NVV2 129 aa9.81□□□□□ -0.84
SCARB2-216ENST00000639300 NBEAL1Q6ZS30 2694 aa9.81□□□□□ -0.84
SCARB2-216ENST00000639300 KIAA0087Q14695 138 aa9.8□□□□□ -0.84
SCARB2-216ENST00000639300 DMXL1Q9Y485 3027 aa9.8□□□□□ -0.84
SCARB2-216ENST00000639300 LINC00208Q96KT6 92 aa9.8□□□□□ -0.84
SCARB2-216ENST00000639300 Q9BRP9 147 aa9.8□□□□□ -0.84
SCARB2-216ENST00000639300 LINC00167Q96N53 147 aa9.79□□□□□ -0.84
SCARB2-216ENST00000639300 PRYO14603 147 aa9.79□□□□□ -0.84
SCARB2-216ENST00000639300 NUPR2A6NF83 97 aa9.78□□□□□ -0.84
SCARB2-216ENST00000639300 F8WDY8 70 aa9.77□□□□□ -0.85
SCARB2-216ENST00000639300 A0A0U1RQV1 116 aa9.77□□□□□ -0.85
SCARB2-216ENST00000639300 ZNF706Q9Y5V0 76 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-216ENST00000639300 SPTSSBQ8NFR3 76 aa9.76□□□□□ -0.85
SCARB2-216ENST00000639300 SMCR5Q8TEV8 140 aa9.75□□□□□ -0.85
SCARB2-216ENST00000639300 LRBAP50851 2863 aa9.75□□□□□ -0.85
SCARB2-216ENST00000639300 TNRC18O15417 2968 aaPredicted RBP9.74□□□□□ -0.85
SCARB2-216ENST00000639300 H3BNG1 76 aa9.73□□□□□ -0.85
SCARB2-216ENST00000639300 KRTAP10-3P60369 221 aa9.73□□□□□ -0.85
SCARB2-216ENST00000639300 TMEM254Q8TBM7 123 aa9.73□□□□□ -0.85
SCARB2-216ENST00000639300 KRTAP1-3Q8IUG1 177 aa9.73□□□□□ -0.85
SCARB2-216ENST00000639300 ATP5EP56381 51 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-216ENST00000639300 CIRBP-AS1Q8TBR5 109 aa9.72□□□□□ -0.85
SCARB2-216ENST00000639300 ELOF1P60002 83 aaKnown RBP9.71□□□□□ -0.85
SCARB2-216ENST00000639300 LINC00588Q9Y4M8 146 aa9.71□□□□□ -0.85
SCARB2-216ENST00000639300 Q6ZRP5 223 aa9.71□□□□□ -0.86
SCARB2-216ENST00000639300 SMIM26A0A096LP01 95 aa9.7□□□□□ -0.86
SCARB2-216ENST00000639300 CASC2Q6XLA1 102 aa9.7□□□□□ -0.86
SCARB2-216ENST00000639300 Q6ZQT0 140 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms