RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ZNF575Q86XF7 245 aa11.82□□□□□ -0.52
CACNA1A-253ENST00000637927 FAM168BA1KXE4 195 aa11.81□□□□□ -0.52
CACNA1A-253ENST00000637927 DSCR10P59022 87 aa11.79□□□□□ -0.52
CACNA1A-253ENST00000637927 MUC7Q8TAX7 377 aa11.79□□□□□ -0.52
CACNA1A-253ENST00000637927 C2CD3Q4AC94 2353 aa11.78□□□□□ -0.52
CACNA1A-253ENST00000637927 EPM2AB3EWF7 344 aa11.77□□□□□ -0.53
CACNA1A-253ENST00000637927 OBSCN-AS1Q96MR7 158 aa11.75□□□□□ -0.53
CACNA1A-253ENST00000637927 COL27A1Q8IZC6 1860 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-253ENST00000637927 ANAPC11Q9NYG5 84 aa11.74□□□□□ -0.53
CACNA1A-253ENST00000637927 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
CACNA1A-253ENST00000637927 NHLRC4P0CG21 123 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-253ENST00000637927 LINC00310P59036 64 aa11.73□□□□□ -0.53
CACNA1A-253ENST00000637927 M0R2T5 61 aa11.73□□□□□ -0.53
CACNA1A-253ENST00000637927 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
CACNA1A-253ENST00000637927 K7EQZ3 153 aa11.72□□□□□ -0.53
CACNA1A-253ENST00000637927 A0A0G2JQZ4 141 aa11.72□□□□□ -0.53
CACNA1A-253ENST00000637927 A0A1W2PNN7 141 aa11.72□□□□□ -0.53
CACNA1A-253ENST00000637927 AMELXQ99217 191 aa11.72□□□□□ -0.53
CACNA1A-253ENST00000637927 LINC00476Q8WZB0 136 aa11.71□□□□□ -0.53
CACNA1A-253ENST00000637927 LINC01600Q96MT4 127 aa11.71□□□□□ -0.54
CACNA1A-253ENST00000637927 CRIPTQ9P021 101 aa11.71□□□□□ -0.54
CACNA1A-253ENST00000637927 NAV2Q8IVL1 2488 aa11.7□□□□□ -0.54
CACNA1A-253ENST00000637927 C8orf87E5RJ46 101 aa11.69□□□□□ -0.54
CACNA1A-253ENST00000637927 IGLV5-37A0A075B6J1 123 aa11.69□□□□□ -0.54
CACNA1A-253ENST00000637927 PTPRBP23467 1997 aa11.69□□□□□ -0.54
CACNA1A-253ENST00000637927 DNAH10OSP0CZ25 163 aa11.69□□□□□ -0.54
CACNA1A-253ENST00000637927 CSNK1G2-AS1Q8NCQ2 148 aa11.67□□□□□ -0.54
CACNA1A-253ENST00000637927 Q6ZRP5 223 aa11.67□□□□□ -0.54
CACNA1A-253ENST00000637927 PIEZO2Q9H5I5 2752 aa11.67□□□□□ -0.54
CACNA1A-253ENST00000637927 Q8N2B8 174 aa11.66□□□□□ -0.54
CACNA1A-253ENST00000637927 A0A1B0GUV1 79 aa11.64□□□□□ -0.55
CACNA1A-253ENST00000637927 A0A096LNJ9 63 aa11.61□□□□□ -0.55
CACNA1A-253ENST00000637927 KRTAP24-1Q3LI83 254 aa11.61□□□□□ -0.55
CACNA1A-253ENST00000637927 NCOR2Q9Y618 2525 aa11.6□□□□□ -0.55
CACNA1A-253ENST00000637927 IGLV5-39A0A0G2JS06 123 aa11.6□□□□□ -0.55
CACNA1A-253ENST00000637927 NBDYA0A0U1RRE5 68 aa11.6□□□□□ -0.55
CACNA1A-253ENST00000637927 TRAV22A0A0B4J277 110 aa11.59□□□□□ -0.55
CACNA1A-253ENST00000637927 Q8NBF4 154 aa11.59□□□□□ -0.55
CACNA1A-253ENST00000637927 JMJD1CQ15652 2540 aa11.58□□□□□ -0.56
CACNA1A-253ENST00000637927 TM2D3Q9BRN9 247 aa11.58□□□□□ -0.56
CACNA1A-253ENST00000637927 C11orf72Q8NBR9 251 aa11.58□□□□□ -0.56
CACNA1A-253ENST00000637927 WIPF1O43516 503 aa11.58□□□□□ -0.56
CACNA1A-253ENST00000637927 LINC00588Q9Y4M8 146 aa11.57□□□□□ -0.56
CACNA1A-253ENST00000637927 IGF2RP11717 2491 aa11.56□□□□□ -0.56
CACNA1A-253ENST00000637927 FAM218AQ96MZ4 157 aa11.56□□□□□ -0.56
CACNA1A-253ENST00000637927 Q8N1X5 172 aa11.56□□□□□ -0.56
CACNA1A-253ENST00000637927 KIF25-AS1Q9Y6Z4 181 aa11.55□□□□□ -0.56
CACNA1A-253ENST00000637927 IGLV5-45A0A087WSX0 123 aa11.55□□□□□ -0.56
CACNA1A-253ENST00000637927 IGLV5-48A0A075B6I7 105 aa11.54□□□□□ -0.56
CACNA1A-253ENST00000637927 CXCL6P80162 114 aa11.53□□□□□ -0.56
CACNA1A-253ENST00000637927 Q6ZQT0 140 aa11.53□□□□□ -0.56
CACNA1A-253ENST00000637927 VPREB1P12018 145 aa11.52□□□□□ -0.57
CACNA1A-253ENST00000637927 TP53AIP1Q9HCN2 124 aa11.51□□□□□ -0.57
CACNA1A-253ENST00000637927 F8WDY8 70 aa11.51□□□□□ -0.57
CACNA1A-253ENST00000637927 IGLV1-50A0A075B6I6 118 aa11.51□□□□□ -0.57
CACNA1A-253ENST00000637927 LINC00304Q8N9R0 145 aa11.5□□□□□ -0.57
CACNA1A-253ENST00000637927 WWC2-AS2Q96NR7 200 aa11.5□□□□□ -0.57
CACNA1A-253ENST00000637927 COA5Q86WW8 74 aa11.48□□□□□ -0.57
CACNA1A-253ENST00000637927 A8MUN3 132 aa11.48□□□□□ -0.57
CACNA1A-253ENST00000637927 ZFYVE26Q68DK2 2539 aa11.47□□□□□ -0.57
CACNA1A-253ENST00000637927 BCE1O60756 84 aa11.46□□□□□ -0.57
CACNA1A-253ENST00000637927 RBM12B-AS1Q9P1G2 102 aa11.46□□□□□ -0.57
CACNA1A-253ENST00000637927 COL4A2P08572 1712 aa11.46□□□□□ -0.57
CACNA1A-253ENST00000637927 TRBV7-4A0A0J9YYF1 115 aa11.45□□□□□ -0.58
CACNA1A-253ENST00000637927 MYO9AB2RTY4 2548 aa11.45□□□□□ -0.58
CACNA1A-253ENST00000637927 MIR22HGQ0VDD5 57 aa11.44□□□□□ -0.58
CACNA1A-253ENST00000637927 TLN1Q9Y490 2541 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-253ENST00000637927 Q6ZRX8 168 aa11.43□□□□□ -0.58
CACNA1A-253ENST00000637927 LINC01561Q8N1V8 128 aa11.43□□□□□ -0.58
CACNA1A-253ENST00000637927 IGHV3OR16-9A0A0B4J2B5 98 aa11.42□□□□□ -0.58
CACNA1A-253ENST00000637927 ELOF1P60002 83 aaKnown RBP11.42□□□□□ -0.58
CACNA1A-253ENST00000637927 C15orf56Q8N910 161 aa11.42□□□□□ -0.58
CACNA1A-253ENST00000637927 WDR87Q6ZQQ6 2873 aa11.4□□□□□ -0.58
CACNA1A-253ENST00000637927 TLN2Q9Y4G6 2542 aa11.4□□□□□ -0.58
CACNA1A-253ENST00000637927 COX8CQ7Z4L0 72 aa11.4□□□□□ -0.58
CACNA1A-253ENST00000637927 MRPL34Q9BQ48 92 aaKnown RBP11.4□□□□□ -0.59
CACNA1A-253ENST00000637927 FN1P02751 2386 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-253ENST00000637927 LRRK2Q5S007 2527 aa11.36□□□□□ -0.59
CACNA1A-253ENST00000637927 CAMK2N1Q7Z7J9 78 aa11.36□□□□□ -0.59
CACNA1A-253ENST00000637927 Q8NAQ8 132 aa11.35□□□□□ -0.59
CACNA1A-253ENST00000637927 PCSK5Q92824 1860 aa11.35□□□□□ -0.59
CACNA1A-253ENST00000637927 PRO0628Q9UI54 55 aa11.35□□□□□ -0.59
CACNA1A-253ENST00000637927 ABCA12Q86UK0 2595 aa11.34□□□□□ -0.59
CACNA1A-253ENST00000637927 KRTAP10-11P60412 298 aa11.34□□□□□ -0.59
CACNA1A-253ENST00000637927 CENPFP49454 3210 aa11.33□□□□□ -0.6
CACNA1A-253ENST00000637927 PLA2G2DQ9UNK4 145 aa11.33□□□□□ -0.6
CACNA1A-253ENST00000637927 UTRNP46939 3433 aa11.33□□□□□ -0.6
CACNA1A-253ENST00000637927 LUZP6Q538Z0 58 aa11.33□□□□□ -0.6
CACNA1A-253ENST00000637927 UQCR11O14957 56 aa11.32□□□□□ -0.6
CACNA1A-253ENST00000637927 PIEZO1Q92508 2521 aa11.32□□□□□ -0.6
CACNA1A-253ENST00000637927 C10orf142B7Z368 130 aa11.32□□□□□ -0.6
CACNA1A-253ENST00000637927 A8MWP4 228 aa11.31□□□□□ -0.6
CACNA1A-253ENST00000637927 LINC00336Q6ZUF6 198 aa11.3□□□□□ -0.6
CACNA1A-253ENST00000637927 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-253ENST00000637927 F8P00451 2351 aa11.28□□□□□ -0.6
CACNA1A-253ENST00000637927 SETD2Q9BYW2 2564 aaPredicted RBP11.27□□□□□ -0.6
CACNA1A-253ENST00000637927 TLX1NBP0CAT3 122 aa11.26□□□□□ -0.61
CACNA1A-253ENST00000637927 CDC42SE1Q9NRR8 79 aa11.26□□□□□ -0.61
CACNA1A-253ENST00000637927 ZNF462Q96JM2 2506 aa11.25□□□□□ -0.61
CACNA1A-253ENST00000637927 Q6ZSA8 131 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms