RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 MAP1LC3CQ9BXW4 147 aa11.02□□□□□ -0.65
CLN6-210ENST00000635747 BCE1O60756 84 aa11.01□□□□□ -0.65
CLN6-210ENST00000635747 PFN2P35080 140 aa11.01□□□□□ -0.65
CLN6-210ENST00000635747 HIST3H2BBQ8N257 126 aa11.01□□□□□ -0.65
CLN6-210ENST00000635747 ERG28Q9UKR5 140 aa11.01□□□□□ -0.65
CLN6-210ENST00000635747 RPL13AP40429 203 aaKnown RBP11□□□□□ -0.65
CLN6-210ENST00000635747 RPL28P46779 137 aaKnown RBP11□□□□□ -0.65
CLN6-210ENST00000635747 C5orf52A6NGY3 159 aa10.99□□□□□ -0.65
CLN6-210ENST00000635747 KRTAP1-4P0C5Y4 121 aa10.99□□□□□ -0.65
CLN6-210ENST00000635747 S100A2P29034 98 aa10.99□□□□□ -0.65
CLN6-210ENST00000635747 RPL37AP8A6NKH3 93 aa10.98□□□□□ -0.65
CLN6-210ENST00000635747 SYS1-DBNDD2H3BUS1 97 aa10.97□□□□□ -0.65
CLN6-210ENST00000635747 SNRPEP62304 92 aaKnown RBP10.97□□□□□ -0.65
CLN6-210ENST00000635747 RPL24P83731 157 aaKnown RBP10.97□□□□□ -0.65
CLN6-210ENST00000635747 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
CLN6-210ENST00000635747 LRP2P98164 4655 aa10.96□□□□□ -0.65
CLN6-210ENST00000635747 GAGE10A6NGK3 116 aa10.96□□□□□ -0.65
CLN6-210ENST00000635747 PET117Q6UWS5 81 aa10.96□□□□□ -0.65
CLN6-210ENST00000635747 ZNF625Q96I27 306 aaPredicted RBP10.96□□□□□ -0.65
CLN6-210ENST00000635747 HIST1H2BLQ99880 126 aa10.96□□□□□ -0.65
CLN6-210ENST00000635747 TMEM223A0PJW6 202 aa10.95□□□□□ -0.66
CLN6-210ENST00000635747 PLNP26678 52 aa10.95□□□□□ -0.66
CLN6-210ENST00000635747 H0Y8G0 127 aa10.93□□□□□ -0.66
CLN6-210ENST00000635747 C3orf79P0CE67 100 aa10.93□□□□□ -0.66
CLN6-210ENST00000635747 VPREB1P12018 145 aa10.93□□□□□ -0.66
CLN6-210ENST00000635747 AKR1D1P51857 326 aa10.93□□□□□ -0.66
CLN6-210ENST00000635747 LINC01545Q5VT33 79 aa10.93□□□□□ -0.66
CLN6-210ENST00000635747 DPM2O94777 84 aa10.92□□□□□ -0.66
CLN6-210ENST00000635747 UBE2AP49459 152 aa10.92□□□□□ -0.66
CLN6-210ENST00000635747 LINC00158P58513 81 aa10.92□□□□□ -0.66
CLN6-210ENST00000635747 IGKV2-28A0A075B6P5 120 aa10.9□□□□□ -0.66
CLN6-210ENST00000635747 C20orf202A1L168 122 aa10.9□□□□□ -0.66
CLN6-210ENST00000635747 LINC00587B1AMM8 73 aa10.9□□□□□ -0.66
CLN6-210ENST00000635747 IGKV2D-28P01615 120 aa10.9□□□□□ -0.66
CLN6-210ENST00000635747 KRTDAPP60985 99 aa10.9□□□□□ -0.66
CLN6-210ENST00000635747 IGKCP01834 107 aa10.89□□□□□ -0.67
CLN6-210ENST00000635747 HERV-K104P63124 156 aa10.89□□□□□ -0.67
CLN6-210ENST00000635747 KRTAP13-1Q8IUC0 172 aa10.88□□□□□ -0.67
CLN6-210ENST00000635747 CRYGAP11844 174 aa10.87□□□□□ -0.67
CLN6-210ENST00000635747 TMA7Q9Y2S6 64 aaKnown RBP10.87□□□□□ -0.67
CLN6-210ENST00000635747 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
CLN6-210ENST00000635747 MYMXA0A1B0GTQ4 84 aa10.85□□□□□ -0.67
CLN6-210ENST00000635747 MEIG1Q5JSS6 88 aa10.85□□□□□ -0.67
CLN6-210ENST00000635747 PMCHL2Q9BQD1 86 aa10.85□□□□□ -0.67
CLN6-210ENST00000635747 NDUFA12Q9UI09 145 aa10.85□□□□□ -0.67
CLN6-210ENST00000635747 A0A0U1RRA0 63 aa10.84□□□□□ -0.67
CLN6-210ENST00000635747 HERVK_113P61574 105 aa10.84□□□□□ -0.67
CLN6-210ENST00000635747 FAM19A1Q7Z5A9 133 aa10.84□□□□□ -0.67
CLN6-210ENST00000635747 M0R378 163 aa10.83□□□□□ -0.68
CLN6-210ENST00000635747 SMIM13P0DJ93 91 aa10.83□□□□□ -0.68
CLN6-210ENST00000635747 TMEM238C9JI98 176 aa10.82□□□□□ -0.68
CLN6-210ENST00000635747 Q8NDZ9 215 aa10.82□□□□□ -0.68
CLN6-210ENST00000635747 TYMSOSQ8TAI1 123 aa10.82□□□□□ -0.68
CLN6-210ENST00000635747 PLEKHB2Q96CS7 222 aa10.82□□□□□ -0.68
CLN6-210ENST00000635747 A0A087X002 238 aa10.81□□□□□ -0.68
CLN6-210ENST00000635747 LEPROTO15243 131 aa10.81□□□□□ -0.68
CLN6-210ENST00000635747 FAM229BQ4G0N7 80 aa10.81□□□□□ -0.68
CLN6-210ENST00000635747 BOD1L2Q8IYS8 172 aa10.8□□□□□ -0.68
CLN6-210ENST00000635747 MIR7-3HGQ8N6C7 128 aa10.8□□□□□ -0.68
CLN6-210ENST00000635747 IGKV2D-26A0A0A0MRZ7 120 aa10.79□□□□□ -0.68
CLN6-210ENST00000635747 PRLHP81277 87 aa10.79□□□□□ -0.68
CLN6-210ENST00000635747 E9PLD3 99 aa10.78□□□□□ -0.68
CLN6-210ENST00000635747 NMUP48645 174 aa10.77□□□□□ -0.69
CLN6-210ENST00000635747 J3QQQ9 107 aa10.76□□□□□ -0.69
CLN6-210ENST00000635747 ANAPC11Q9NYG5 84 aa10.76□□□□□ -0.69
CLN6-210ENST00000635747 PRYO14603 147 aa10.75□□□□□ -0.69
CLN6-210ENST00000635747 SCGB1D1O95968 90 aa10.75□□□□□ -0.69
CLN6-210ENST00000635747 PRR4Q16378 134 aa10.75□□□□□ -0.69
CLN6-210ENST00000635747 LGALS3P17931 250 aaKnown RBP10.74□□□□□ -0.69
CLN6-210ENST00000635747 TSPEAR-AS2P59090 65 aa10.74□□□□□ -0.69
CLN6-210ENST00000635747 S100A12P80511 92 aa10.74□□□□□ -0.69
CLN6-210ENST00000635747 JOSD1Q15040 202 aaPredicted RBP10.74□□□□□ -0.69
CLN6-210ENST00000635747 RNF213Q63HN8 5207 aa10.74□□□□□ -0.69
CLN6-210ENST00000635747 LOC107984156A0A0G2JMH3 177 aa10.73□□□□□ -0.69
CLN6-210ENST00000635747 NCR3O14931 201 aa10.73□□□□□ -0.69
CLN6-210ENST00000635747 TSPAN13O95857 204 aa10.73□□□□□ -0.69
CLN6-210ENST00000635747 ARL17AQ8IVW1 177 aa10.73□□□□□ -0.69
CLN6-210ENST00000635747 HIGD2AQ9BW72 106 aa10.73□□□□□ -0.69
CLN6-210ENST00000635747 KCNQ1DNQ9H478 68 aa10.73□□□□□ -0.69
CLN6-210ENST00000635747 KRTAP13-2Q52LG2 175 aa10.72□□□□□ -0.69
CLN6-210ENST00000635747 ATOH7Q8N100 152 aa10.72□□□□□ -0.69
CLN6-210ENST00000635747 LINC00337Q8N6G1 96 aa10.72□□□□□ -0.69
CLN6-210ENST00000635747 LPAP08519 4548 aa10.72□□□□□ -0.69
CLN6-210ENST00000635747 HSBP1L1C9JCN9 74 aa10.71□□□□□ -0.69
CLN6-210ENST00000635747 MIEN1Q9BRT3 115 aa10.71□□□□□ -0.69
CLN6-210ENST00000635747 CTAG1AP78358 180 aa10.7□□□□□ -0.7
CLN6-210ENST00000635747 ZNF706Q9Y5V0 76 aaPredicted RBP10.7□□□□□ -0.7
CLN6-210ENST00000635747 TRBV10-2A0A0K0K1G8 114 aa10.69□□□□□ -0.7
CLN6-210ENST00000635747 ETDCA0A1B0GVM5 59 aa10.69□□□□□ -0.7
CLN6-210ENST00000635747 SPRR1AP35321 89 aa10.69□□□□□ -0.7
CLN6-210ENST00000635747 LINC00304Q8N9R0 145 aa10.69□□□□□ -0.7
CLN6-210ENST00000635747 ANKRD39Q53RE8 183 aa10.68□□□□□ -0.7
CLN6-210ENST00000635747 DAND5Q8N907 189 aa10.68□□□□□ -0.7
CLN6-210ENST00000635747 TRBV10-3A0A0K0K1G6 114 aa10.67□□□□□ -0.7
CLN6-210ENST00000635747 NDUFC2O95298 119 aa10.66□□□□□ -0.7
CLN6-210ENST00000635747 SPRR4Q96PI1 79 aa10.66□□□□□ -0.7
CLN6-210ENST00000635747 SPANXB1Q9NS25 103 aaPredicted RBP10.66□□□□□ -0.7
CLN6-210ENST00000635747 KRTAP4-16G5E9R7 235 aaPredicted RBP10.65□□□□□ -0.7
CLN6-210ENST00000635747 DDTP30046 118 aa10.65□□□□□ -0.7
CLN6-210ENST00000635747 PYY3Q5JQD4 70 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms