RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	PPBP	P02775	128 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	MT1HL1	P0DM35	61 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	XCL1	P47992	114 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	SERF2	P84101	59 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	FABP9	Q0Z7S8	132 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	ZNF56	Q15929	161 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	LINC00269	Q8N2A0	174 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	C9orf163	Q8N9P6	203 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	PSMG3	Q9BT73	122 aa	Predicted RBP	3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	DPH3P1	Q9H4G8	78 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	PSORS1C2	Q9UIG4	136 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	TNFSF18	Q9UNG2	199 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273		A0A0D9SG52	128 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	TRBV10-1	A0A0K0K1A3	114 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	LST1	O00453	97 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	UBE2G1	P62253	170 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	IFITM2	Q01629	132 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	PMAIP1	Q13794	54 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	MIA	Q16674	131 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	RPL7L1	Q6DKI1	246 aa	Known RBP	3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273		Q86TA4	180 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	OR10AG1	Q8NH19	301 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	ZFP30	Q9Y2G7	519 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	FAT3	Q8TDW7	4589 aa		3.05	□□□□□ -1.92
SMARCA2-238	ENST00000635273	CTXND1	A0A1B0GTU2	59 aa		3.04	□□□□□ -1.92
SMARCA2-238	ENST00000635273		A0A1B0GV50	99 aa		3.04	□□□□□ -1.92
SMARCA2-238	ENST00000635273	DEFA1	P59665	94 aa		3.04	□□□□□ -1.92
SMARCA2-238	ENST00000635273	SPANXN1	Q5VSR9	72 aa		3.04	□□□□□ -1.92
SMARCA2-238	ENST00000635273	KRTAP26-1	Q6PEX3	210 aa		3.04	□□□□□ -1.92
SMARCA2-238	ENST00000635273	LINC00299	Q6ZSB3	139 aa		3.04	□□□□□ -1.92
SMARCA2-238	ENST00000635273	BTF3L4	Q96K17	158 aa		3.04	□□□□□ -1.92
SMARCA2-238	ENST00000635273	AQP10	Q96PS8	301 aa		3.04	□□□□□ -1.92
SMARCA2-238	ENST00000635273	DERL1	Q9BUN8	251 aa		3.04	□□□□□ -1.92
SMARCA2-238	ENST00000635273	ZNF471	Q9BX82	626 aa	Predicted RBP	3.04	□□□□□ -1.92
SMARCA2-238	ENST00000635273	HMCN2	Q8NDA2	5059 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	TRBV25-1	A0A075B6N4	114 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	FXYD6-FXYD2	A0A087WZ82	144 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	IGKV3OR2-268	A0A0C4DH90	116 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	TRBV6-1	A0A0K0K1D8	114 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	MAP1LC3B2	A6NCE7	125 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	C11orf86	A6NJI1	115 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273		A8MUN3	132 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	NPY	P01303	97 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	SMIM17	P0DL12	118 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	AKR1C3	P42330	323 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	COX6A2	Q02221	97 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	AKR1C8P	Q5T2L2	129 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	SMCR5	Q8TEV8	140 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	TTTY13	Q9BZ97	58 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	MAP1LC3B	Q9GZQ8	125 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	BIN3	Q9NQY0	253 aa		3.03	□□□□□ -1.92
SMARCA2-238	ENST00000635273	PKHD1L1	Q86WI1	4243 aa		3.02	□□□□□ -1.93
SMARCA2-238	ENST00000635273	IGHV3-64	A0A075B6Q5	118 aa		3.02	□□□□□ -1.93
SMARCA2-238	ENST00000635273	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3.02	□□□□□ -1.93
SMARCA2-238	ENST00000635273	IGHV1-24	A0A0C4DH33	117 aa		3.02	□□□□□ -1.93
SMARCA2-238	ENST00000635273		A0A1B0GW54	56 aa		3.02	□□□□□ -1.93
SMARCA2-238	ENST00000635273	MGP	P08493	103 aa		3.02	□□□□□ -1.93
SMARCA2-238	ENST00000635273	PKIA	P61925	76 aa		3.02	□□□□□ -1.93
SMARCA2-238	ENST00000635273	TMEM97	Q5BJF2	176 aa		3.02	□□□□□ -1.93
SMARCA2-238	ENST00000635273	BAGE2	Q86Y30	109 aa		3.02	□□□□□ -1.93
SMARCA2-238	ENST00000635273	SFT2D1	Q8WV19	159 aa		3.02	□□□□□ -1.93
SMARCA2-238	ENST00000635273		M0QY20	66 aa		3.01	□□□□□ -1.93
SMARCA2-238	ENST00000635273	ARPC5	O15511	151 aa		3.01	□□□□□ -1.93
SMARCA2-238	ENST00000635273	CNBP	P62633	177 aa	Known RBP	3.01	□□□□□ -1.93
SMARCA2-238	ENST00000635273	SPANXC	Q9NY87	97 aa		3.01	□□□□□ -1.93
SMARCA2-238	ENST00000635273		F8W036	122 aa		3	□□□□□ -1.93
SMARCA2-238	ENST00000635273	FGF6	P10767	208 aa		3	□□□□□ -1.93
SMARCA2-238	ENST00000635273	CIRBP	Q14011	172 aa	Known RBP	3	□□□□□ -1.93
SMARCA2-238	ENST00000635273	IQCJ	Q1A5X6	159 aa		3	□□□□□ -1.93
SMARCA2-238	ENST00000635273	FAM213B	Q8TBF2	198 aa		3	□□□□□ -1.93
SMARCA2-238	ENST00000635273	SPACA4	Q8TDM5	124 aa		3	□□□□□ -1.93
SMARCA2-238	ENST00000635273	LINC00526	Q96FQ7	95 aa		3	□□□□□ -1.93
SMARCA2-238	ENST00000635273	LINC01600	Q96MT4	127 aa		3	□□□□□ -1.93
SMARCA2-238	ENST00000635273	PLAC8	Q9NZF1	115 aa		3	□□□□□ -1.93
SMARCA2-238	ENST00000635273	PFDN1	O60925	122 aa		2.99	□□□□□ -1.93
SMARCA2-238	ENST00000635273	IFNA1	P01562	189 aa		2.99	□□□□□ -1.93
SMARCA2-238	ENST00000635273	RPL35	P42766	123 aa	Known RBP	2.99	□□□□□ -1.93
SMARCA2-238	ENST00000635273	SS18	Q15532	418 aa		2.99	□□□□□ -1.93
SMARCA2-238	ENST00000635273	LYZL1	Q6UWQ5	148 aa		2.99	□□□□□ -1.93
SMARCA2-238	ENST00000635273	KCNRG	Q8N5I3	272 aa		2.99	□□□□□ -1.93
SMARCA2-238	ENST00000635273	AP1S3	Q96PC3	154 aa		2.99	□□□□□ -1.93
SMARCA2-238	ENST00000635273	NIT2	Q9NQR4	276 aa		2.99	□□□□□ -1.93
SMARCA2-238	ENST00000635273		A0A096LNI7	61 aa		2.98	□□□□□ -1.93
SMARCA2-238	ENST00000635273	TRAV26-2	A0A0B4J265	109 aa		2.98	□□□□□ -1.93
SMARCA2-238	ENST00000635273	S100P	P25815	95 aa		2.98	□□□□□ -1.93
SMARCA2-238	ENST00000635273	CCL20	P78556	96 aa		2.98	□□□□□ -1.93
SMARCA2-238	ENST00000635273	MBD3L1	Q8WWY6	194 aa		2.98	□□□□□ -1.93
SMARCA2-238	ENST00000635273	TCEAL7	Q9BRU2	100 aa		2.98	□□□□□ -1.93
SMARCA2-238	ENST00000635273	LRP2	P98164	4655 aa		2.98	□□□□□ -1.93
SMARCA2-238	ENST00000635273	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	2.97	□□□□□ -1.93
SMARCA2-238	ENST00000635273	IGKV2-29	A2NJV5	120 aa	Predicted RBP	2.97	□□□□□ -1.93
SMARCA2-238	ENST00000635273	CXCL1	P09341	107 aa		2.97	□□□□□ -1.93
SMARCA2-238	ENST00000635273	IGLC6	P0CF74	106 aa		2.97	□□□□□ -1.93
SMARCA2-238	ENST00000635273	FOXA3	P55318	350 aa	Predicted RBP	2.97	□□□□□ -1.93
SMARCA2-238	ENST00000635273	SPINK6	Q6UWN8	80 aa		2.97	□□□□□ -1.93
SMARCA2-238	ENST00000635273	RPL39L	Q96EH5	51 aa	Known RBP	2.97	□□□□□ -1.93
SMARCA2-238	ENST00000635273	GNG13	Q9P2W3	67 aa		2.97	□□□□□ -1.93
SMARCA2-238	ENST00000635273	PKIG	Q9Y2B9	76 aa		2.97	□□□□□ -1.93
SMARCA2-238	ENST00000635273	TNXB	P22105	4242 aa		2.96	□□□□□ -1.94

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