RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
CDC42BPB-209ENST00000634889 MRPL55Q7Z7F7 128 aaKnown RBP9.11□□□□□ -0.95
CDC42BPB-209ENST00000634889 HIST3H2BBQ8N257 126 aa9.11□□□□□ -0.95
CDC42BPB-209ENST00000634889 S100A2P29034 98 aa9.1□□□□□ -0.95
CDC42BPB-209ENST00000634889 AKR1D1P51857 326 aa9.1□□□□□ -0.95
CDC42BPB-209ENST00000634889 MYCBP2O75592 4640 aa9.09□□□□□ -0.95
CDC42BPB-209ENST00000634889 SMIM13P0DJ93 91 aa9.09□□□□□ -0.95
CDC42BPB-209ENST00000634889 C1orf137Q5JT78 98 aa9.09□□□□□ -0.95
CDC42BPB-209ENST00000634889 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.95
CDC42BPB-209ENST00000634889 NKAPP1Q8N9T2 125 aa9.09□□□□□ -0.95
CDC42BPB-209ENST00000634889 HIST1H2BLQ99880 126 aa9.09□□□□□ -0.95
CDC42BPB-209ENST00000634889 KRTAP29-1A8MX34 341 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPB-209ENST00000634889 RPL24P83731 157 aaKnown RBP9.08□□□□□ -0.96
CDC42BPB-209ENST00000634889 SPINK6Q6UWN8 80 aa9.08□□□□□ -0.96
CDC42BPB-209ENST00000634889 FLG2Q5D862 2391 aaPredicted RBP9.07□□□□□ -0.96
CDC42BPB-209ENST00000634889 A0A0U1RRA0 63 aa9.07□□□□□ -0.96
CDC42BPB-209ENST00000634889 VPREB1P12018 145 aa9.07□□□□□ -0.96
CDC42BPB-209ENST00000634889 SRSF9Q13242 221 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDC42BPB-209ENST00000634889 OXTP01178 125 aa9.06□□□□□ -0.96
CDC42BPB-209ENST00000634889 MIR7-3HGQ8N6C7 128 aa9.06□□□□□ -0.96
CDC42BPB-209ENST00000634889 PKHD1L1Q86WI1 4243 aa9.06□□□□□ -0.96
CDC42BPB-209ENST00000634889 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
CDC42BPB-209ENST00000634889 LINC00167Q96N53 147 aa9.05□□□□□ -0.96
CDC42BPB-209ENST00000634889 SNRPEP62304 92 aaKnown RBP9.04□□□□□ -0.96
CDC42BPB-209ENST00000634889 C5orf52A6NGY3 159 aa9.03□□□□□ -0.96
CDC42BPB-209ENST00000634889 IGKV2D-26A0A0A0MRZ7 120 aa9.02□□□□□ -0.97
CDC42BPB-209ENST00000634889 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
CDC42BPB-209ENST00000634889 A0A0J9YXY3 114 aa9.02□□□□□ -0.97
CDC42BPB-209ENST00000634889 GAGE10A6NGK3 116 aa9.02□□□□□ -0.97
CDC42BPB-209ENST00000634889 RPL37AP8A6NKH3 93 aa9.02□□□□□ -0.97
CDC42BPB-209ENST00000634889 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
CDC42BPB-209ENST00000634889 Q8NDZ9 215 aa9.02□□□□□ -0.97
CDC42BPB-209ENST00000634889 J3QL48 77 aa9.01□□□□□ -0.97
CDC42BPB-209ENST00000634889 REG3GQ6UW15 175 aa9.01□□□□□ -0.97
CDC42BPB-209ENST00000634889 BOD1L2Q8IYS8 172 aa9.01□□□□□ -0.97
CDC42BPB-209ENST00000634889 IGLV1-50A0A075B6I6 118 aa9□□□□□ -0.97
CDC42BPB-209ENST00000634889 ZNF815PA8K554 130 aa9□□□□□ -0.97
CDC42BPB-209ENST00000634889 ATOH7Q8N100 152 aa9□□□□□ -0.97
CDC42BPB-209ENST00000634889 DAND5Q8N907 189 aa9□□□□□ -0.97
CDC42BPB-209ENST00000634889 DIRC1Q969H9 104 aa9□□□□□ -0.97
CDC42BPB-209ENST00000634889 M0R378 163 aa8.99□□□□□ -0.97
CDC42BPB-209ENST00000634889 BCE1O60756 84 aa8.99□□□□□ -0.97
CDC42BPB-209ENST00000634889 TIMM17BO60830 172 aa8.99□□□□□ -0.97
CDC42BPB-209ENST00000634889 MIEN1Q9BRT3 115 aa8.99□□□□□ -0.97
CDC42BPB-209ENST00000634889 IGKV2-28A0A075B6P5 120 aa8.98□□□□□ -0.97
CDC42BPB-209ENST00000634889 IGKV2D-28P01615 120 aa8.98□□□□□ -0.97
CDC42BPB-209ENST00000634889 ANKRD39Q53RE8 183 aa8.98□□□□□ -0.97
CDC42BPB-209ENST00000634889 H0Y9J4 135 aa8.97□□□□□ -0.97
CDC42BPB-209ENST00000634889 ZNF861PO60384 105 aa8.97□□□□□ -0.97
CDC42BPB-209ENST00000634889 ADAMTSL4-AS1Q5T5F5 129 aa8.97□□□□□ -0.97
CDC42BPB-209ENST00000634889 TTTY13Q9BZ97 58 aa8.97□□□□□ -0.97
CDC42BPB-209ENST00000634889 NDUFC2O95298 119 aa8.96□□□□□ -0.98
CDC42BPB-209ENST00000634889 RPL28P46779 137 aaKnown RBP8.96□□□□□ -0.98
CDC42BPB-209ENST00000634889 LINC01600Q96MT4 127 aa8.96□□□□□ -0.98
CDC42BPB-209ENST00000634889 LITAFQ99732 161 aa8.96□□□□□ -0.98
CDC42BPB-209ENST00000634889 DMBT1Q9UGM3 2413 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPB-209ENST00000634889 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.98
CDC42BPB-209ENST00000634889 TRBV10-2A0A0K0K1G8 114 aa8.95□□□□□ -0.98
CDC42BPB-209ENST00000634889 HSBP1L1C9JCN9 74 aa8.95□□□□□ -0.98
CDC42BPB-209ENST00000634889 NCR3O14931 201 aa8.95□□□□□ -0.98
CDC42BPB-209ENST00000634889 TMEM126AQ9H061 195 aa8.95□□□□□ -0.98
CDC42BPB-209ENST00000634889 SPANXB1Q9NS25 103 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPB-209ENST00000634889 FAT3Q8TDW7 4589 aa8.94□□□□□ -0.98
CDC42BPB-209ENST00000634889 SOSTDC1Q6X4U4 206 aa8.93□□□□□ -0.98
CDC42BPB-209ENST00000634889 SCGB1D4Q6XE38 83 aa8.93□□□□□ -0.98
CDC42BPB-209ENST00000634889 TMEM238C9JI98 176 aa8.92□□□□□ -0.98
CDC42BPB-209ENST00000634889 SCGB1D1O95968 90 aa8.92□□□□□ -0.98
CDC42BPB-209ENST00000634889 MT1HL1P0DM35 61 aa8.92□□□□□ -0.98
CDC42BPB-209ENST00000634889 UBE2AP49459 152 aa8.92□□□□□ -0.98
CDC42BPB-209ENST00000634889 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
CDC42BPB-209ENST00000634889 PRYO14603 147 aa8.91□□□□□ -0.98
CDC42BPB-209ENST00000634889 NPC2P61916 151 aa8.91□□□□□ -0.98
CDC42BPB-209ENST00000634889 S100A12P80511 92 aa8.91□□□□□ -0.98
CDC42BPB-209ENST00000634889 PCP2Q8IVA1 136 aa8.91□□□□□ -0.98
CDC42BPB-209ENST00000634889 LINC00308Q8TCZ7 52 aa8.91□□□□□ -0.98
CDC42BPB-209ENST00000634889 SPANXDQ9BXN6 97 aa8.91□□□□□ -0.98
CDC42BPB-209ENST00000634889 KCNQ1DNQ9H478 68 aa8.91□□□□□ -0.98
CDC42BPB-209ENST00000634889 SPANXCQ9NY87 97 aa8.91□□□□□ -0.98
CDC42BPB-209ENST00000634889 EIF4EBP3O60516 100 aaPredicted RBP8.9□□□□□ -0.98
CDC42BPB-209ENST00000634889 FAM19A1Q7Z5A9 133 aa8.9□□□□□ -0.98
CDC42BPB-209ENST00000634889 TRBV10-3A0A0K0K1G6 114 aa8.89□□□□□ -0.99
CDC42BPB-209ENST00000634889 DDTP30046 118 aa8.89□□□□□ -0.99
CDC42BPB-209ENST00000634889 Q6ZVH6 145 aa8.89□□□□□ -0.99
CDC42BPB-209ENST00000634889 COPS9Q8WXC6 57 aa8.89□□□□□ -0.99
CDC42BPB-209ENST00000634889 PPDPFQ9H3Y8 114 aa8.89□□□□□ -0.99
CDC42BPB-209ENST00000634889 SPRR1AP35321 89 aa8.88□□□□□ -0.99
CDC42BPB-209ENST00000634889 HERC1Q15751 4861 aa8.88□□□□□ -0.99
CDC42BPB-209ENST00000634889 IGLV6-57P01721 117 aa8.87□□□□□ -0.99
CDC42BPB-209ENST00000634889 KRTAP1-4P0C5Y4 121 aa8.87□□□□□ -0.99
CDC42BPB-209ENST00000634889 PRLHP81277 87 aa8.87□□□□□ -0.99
CDC42BPB-209ENST00000634889 S100A7L2Q5SY68 101 aa8.87□□□□□ -0.99
CDC42BPB-209ENST00000634889 LINC00337Q8N6G1 96 aa8.87□□□□□ -0.99
CDC42BPB-209ENST00000634889 IFITM1P13164 125 aa8.86□□□□□ -0.99
CDC42BPB-209ENST00000634889 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
CDC42BPB-209ENST00000634889 CBY1Q9Y3M2 126 aa8.85□□□□□ -0.99
CDC42BPB-209ENST00000634889 KRTAP4-16G5E9R7 235 aaPredicted RBP8.84□□□□□ -0.99
CDC42BPB-209ENST00000634889 JOSD1Q15040 202 aaPredicted RBP8.84□□□□□ -0.99
CDC42BPB-209ENST00000634889 LINC00518Q8N0U6 118 aa8.84□□□□□ -0.99
CDC42BPB-209ENST00000634889 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
CDC42BPB-209ENST00000634889 TMA7Q9Y2S6 64 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms