RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 NEXMIFQ5QGS0 1516 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 MYCBP2O75592 4640 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 MKI67P46013 3256 aaKnown RBP0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PIK3C2BO00750 1634 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 LOC285095A0A1B0GVY8 99 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CRYM-AS1A6NIL9 109 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 FAM223BA6NKX1 122 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 F8VRH5 84 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CHKB-CPT1BH3BT56 60 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 I3L2K1 104 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 UQCR11O14957 56 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 NDUFC1O43677 76 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 COX6CP09669 75 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 KRTAP2-3P0C7H8 128 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 LINC00032P0C843 101 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SNCAP37840 140 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SEC11AP67812 179 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PMCHL2Q9BQD1 86 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 VAMP8Q9BV40 100 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 KRTAP2-4Q9BYR9 128 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 KRTAP2-1Q9BYU5 128 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SCP2D1Q9UJQ7 156 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 R4GMQ9 66 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 V9GYH0 126 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 V9GYS6 101 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 ACANP16112 2415 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 EPPK1P58107 5090 aaKnown RBP0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 MYO5CQ9NQX4 1742 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 MTORP42345 2549 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 TLN2Q9Y4G6 2542 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 ALMS1Q8TCU4 4167 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SSPOA2VEC9 5147 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 ATP7BP35670 1465 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 DSPP15924 2871 aaKnown RBP0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 DNMBPQ6XZF7 1577 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 LPAP08519 4548 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 WIZO95785 1651 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 ABCA13Q86UQ4 5058 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 EP400Q96L91 3159 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 DOT1LQ8TEK3 1739 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 K7EP34 96 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 GNGT2O14610 69 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SAA2P0DJI9 122 aaPredicted RBP0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 KRTDAPP60985 99 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 COX17Q14061 63 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CFAP126Q5VTH2 177 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 BAGE2Q86Y30 109 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 LCN9Q8WX39 176 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 NXT2Q9NPJ8 142 aaKnown RBP0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 LINC00846Q9NV44 126 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 HIGD1BQ9P298 99 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 RYR3Q15413 4870 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PRRC2CQ9Y520 2896 aaKnown RBP0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 KMT2DO14686 5537 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 F8P00451 2351 aa0.28□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 RRBP1Q9P2E9 1410 aaKnown RBP0.28□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PKD1P98161 4303 aa0.28□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 NCOA2Q15596 1464 aa0.28□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 CD163L1Q9NR16 1453 aa0.28□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SPEGQ15772 3267 aa0.28□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 HIVEP1P15822 2718 aa0.28□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 VCANP13611 3396 aa0.28□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 TGP01266 2768 aa0.28□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 RNF17Q9BXT8 1623 aaKnown RBP0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 BIRC6Q9NR09 4857 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PREX1Q8TCU6 1659 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 CNOT1A5YKK6 2376 aaKnown RBP0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 REV3LO60673 3130 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 IGF2RP11717 2491 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 A0A0G2JND7 137 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 APOC3P02656 99 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 GYPAP02724 150 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 NMBP08949 121 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 TDRG1Q3Y452 100 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 MANBALQ9NQG1 85 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 FAIMQ9NVQ4 179 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 UQCR10Q9UDW1 63 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 AP4S1Q9Y587 144 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 UACAQ9BZF9 1416 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 MDN1Q9NU22 5596 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 ADAMTS12P58397 1594 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PLCH1Q4KWH8 1693 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 WDR87Q6ZQQ6 2873 aa0.27□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 CACNA1EQ15878 2313 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PKHD1P08F94 4074 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 COL7A1Q02388 2944 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 CRYBG3Q68DQ2 2970 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PHGR1C9JFL3 82 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PIN1P1O15428 100 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 BCE1O60756 84 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 MGPP08493 103 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 FXYD6P3P58550 94 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 C10orf113Q5VZT2 155 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SPATA8Q6RVD6 105 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 DEFB123Q8N688 67 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SMIM4Q8WVI0 70 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 LYSTQ99698 3801 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PLIN4Q96Q06 1357 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 NESP48681 1621 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 ZC3H13Q5T200 1668 aaKnown RBP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms