RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 NHP2Q9NX24 153 aaKnown RBP11.98□□□□□ -0.49
PNKP-224ENST00000631020 CBY1Q9Y3M2 126 aa11.98□□□□□ -0.49
PNKP-224ENST00000631020 F8WDY8 70 aa11.97□□□□□ -0.49
PNKP-224ENST00000631020 SMR3BP02814 79 aaPredicted RBP11.97□□□□□ -0.49
PNKP-224ENST00000631020 NDUFA1O15239 70 aa11.96□□□□□ -0.49
PNKP-224ENST00000631020 SDIM1Q6ZPB5 146 aa11.96□□□□□ -0.49
PNKP-224ENST00000631020 SPCS1Q9Y6A9 102 aa11.96□□□□□ -0.49
PNKP-224ENST00000631020 C6orf48Q9UBA6 75 aa11.96□□□□□ -0.5
PNKP-224ENST00000631020 CKS1BP61024 79 aa11.95□□□□□ -0.5
PNKP-224ENST00000631020 HAMPP81172 84 aa11.95□□□□□ -0.5
PNKP-224ENST00000631020 LGALS3P17931 250 aaKnown RBP11.94□□□□□ -0.5
PNKP-224ENST00000631020 SRSF9Q13242 221 aaKnown RBP eCLIP11.93□□□□□ -0.5
PNKP-224ENST00000631020 PLEKHB2Q96CS7 222 aa11.93□□□□□ -0.5
PNKP-224ENST00000631020 LEPROTO15243 131 aa11.92□□□□□ -0.5
PNKP-224ENST00000631020 RNF151Q2KHN1 245 aa11.92□□□□□ -0.5
PNKP-224ENST00000631020 SPANXB1Q9NS25 103 aaPredicted RBP11.92□□□□□ -0.5
PNKP-224ENST00000631020 A0A1B0GWB2 263 aa11.91□□□□□ -0.5
PNKP-224ENST00000631020 CXCL5P42830 114 aa11.91□□□□□ -0.5
PNKP-224ENST00000631020 C9orf116Q5BN46 136 aaPredicted RBP11.91□□□□□ -0.5
PNKP-224ENST00000631020 TRBV30A0A0K0K1B3 111 aa11.91□□□□□ -0.5
PNKP-224ENST00000631020 K7ERU9 68 aa11.91□□□□□ -0.5
PNKP-224ENST00000631020 TSPEAR-AS2P59090 65 aa11.91□□□□□ -0.5
PNKP-224ENST00000631020 DMBT1Q9UGM3 2413 aaPredicted RBP11.9□□□□□ -0.5
PNKP-224ENST00000631020 J3QQQ9 107 aa11.9□□□□□ -0.5
PNKP-224ENST00000631020 PANO1I0J062 215 aa11.89□□□□□ -0.51
PNKP-224ENST00000631020 LYRM7Q5U5X0 104 aa11.89□□□□□ -0.51
PNKP-224ENST00000631020 ZNF625Q96I27 306 aaPredicted RBP11.89□□□□□ -0.51
PNKP-224ENST00000631020 K7ERJ3 54 aa11.88□□□□□ -0.51
PNKP-224ENST00000631020 PLA2G1BP04054 148 aaKnown RBP11.88□□□□□ -0.51
PNKP-224ENST00000631020 NAA38Q9BRA0 125 aaKnown RBP11.88□□□□□ -0.51
PNKP-224ENST00000631020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.88□□□□□ -0.51
PNKP-224ENST00000631020 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
PNKP-224ENST00000631020 OCIAD2Q56VL3 154 aa11.87□□□□□ -0.51
PNKP-224ENST00000631020 SCXQ7RTU7 201 aa11.87□□□□□ -0.51
PNKP-224ENST00000631020 FLG2Q5D862 2391 aaPredicted RBP11.87□□□□□ -0.51
PNKP-224ENST00000631020 MYCBP2O75592 4640 aa11.87□□□□□ -0.51
PNKP-224ENST00000631020 A0A096LNI7 61 aa11.86□□□□□ -0.51
PNKP-224ENST00000631020 LOC107984640A0A0U1RRK4 108 aa11.86□□□□□ -0.51
PNKP-224ENST00000631020 TLX1NBP0CAT3 122 aa11.86□□□□□ -0.51
PNKP-224ENST00000631020 LINC00528Q8N1L1 170 aa11.86□□□□□ -0.51
PNKP-224ENST00000631020 TMEM238C9JI98 176 aa11.85□□□□□ -0.51
PNKP-224ENST00000631020 Q6ZRP5 223 aa11.85□□□□□ -0.51
PNKP-224ENST00000631020 NDUFA12Q9UI09 145 aa11.85□□□□□ -0.51
PNKP-224ENST00000631020 IGKV2-24A0A0C4DH68 120 aa11.84□□□□□ -0.51
PNKP-224ENST00000631020 GAGE2BQ13066 116 aa11.84□□□□□ -0.51
PNKP-224ENST00000631020 CIRBPQ14011 172 aaKnown RBP11.84□□□□□ -0.51
PNKP-224ENST00000631020 NDUFC2-KCTD14E9PQ53 114 aa11.83□□□□□ -0.52
PNKP-224ENST00000631020 RPL18AQ02543 176 aaKnown RBP11.83□□□□□ -0.52
PNKP-224ENST00000631020 CIRBP-AS1Q8TBR5 109 aa11.82□□□□□ -0.52
PNKP-224ENST00000631020 F8W1H4 67 aa11.81□□□□□ -0.52
PNKP-224ENST00000631020 RPL24P83731 157 aaKnown RBP11.81□□□□□ -0.52
PNKP-224ENST00000631020 SFTA2Q6UW10 78 aa11.81□□□□□ -0.52
PNKP-224ENST00000631020 SPACA4Q8TDM5 124 aa11.81□□□□□ -0.52
PNKP-224ENST00000631020 PKIGQ9Y2B9 76 aa11.81□□□□□ -0.52
PNKP-224ENST00000631020 GAGE2EQ4V326 116 aa11.81□□□□□ -0.52
PNKP-224ENST00000631020 GAGE2DQ9UEU5 116 aa11.81□□□□□ -0.52
PNKP-224ENST00000631020 ERG28Q9UKR5 140 aa11.81□□□□□ -0.52
PNKP-224ENST00000631020 PFN2P35080 140 aa11.8□□□□□ -0.52
PNKP-224ENST00000631020 HERC1Q15751 4861 aa11.79□□□□□ -0.52
PNKP-224ENST00000631020 HERV-K104P63124 156 aa11.79□□□□□ -0.52
PNKP-224ENST00000631020 DPH3Q96FX2 82 aa11.78□□□□□ -0.52
PNKP-224ENST00000631020 VPS25Q9BRG1 176 aa11.78□□□□□ -0.52
PNKP-224ENST00000631020 LINC00474Q9P2X8 69 aa11.78□□□□□ -0.52
PNKP-224ENST00000631020 A0A087WYN8 130 aa11.77□□□□□ -0.52
PNKP-224ENST00000631020 COX17Q14061 63 aa11.76□□□□□ -0.53
PNKP-224ENST00000631020 C9orf129Q5T035 196 aaKnown RBP11.76□□□□□ -0.53
PNKP-224ENST00000631020 XAGE1AQ9HD64 81 aa11.76□□□□□ -0.53
PNKP-224ENST00000631020 A0A0U1RRA0 63 aa11.76□□□□□ -0.53
PNKP-224ENST00000631020 J3QR89 54 aa11.76□□□□□ -0.53
PNKP-224ENST00000631020 A0A1W2PNN7 141 aa11.75□□□□□ -0.53
PNKP-224ENST00000631020 KRTAP10-4P60372 401 aaPredicted RBP11.75□□□□□ -0.53
PNKP-224ENST00000631020 PRO1854Q9UHT4 67 aa11.75□□□□□ -0.53
PNKP-224ENST00000631020 TRBV20-1A0A075B6N2 111 aa11.74□□□□□ -0.53
PNKP-224ENST00000631020 A0A0B4J2C4 111 aa11.74□□□□□ -0.53
PNKP-224ENST00000631020 A0A0J9YXY3 114 aa11.74□□□□□ -0.53
PNKP-224ENST00000631020 FAM168BA1KXE4 195 aa11.74□□□□□ -0.53
PNKP-224ENST00000631020 TSPAN13O95857 204 aa11.74□□□□□ -0.53
PNKP-224ENST00000631020 LINC00158P58513 81 aa11.74□□□□□ -0.53
PNKP-224ENST00000631020 MEIG1Q5JSS6 88 aa11.74□□□□□ -0.53
PNKP-224ENST00000631020 PLAC8Q9NZF1 115 aa11.74□□□□□ -0.53
PNKP-224ENST00000631020 KRTAP7-1Q8IUC3 87 aa11.73□□□□□ -0.53
PNKP-224ENST00000631020 TIMM17BO60830 172 aa11.72□□□□□ -0.53
PNKP-224ENST00000631020 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
PNKP-224ENST00000631020 SND1-IT1Q9HBX3 110 aa11.72□□□□□ -0.53
PNKP-224ENST00000631020 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
PNKP-224ENST00000631020 LOC107984156A0A0G2JMH3 177 aa11.71□□□□□ -0.53
PNKP-224ENST00000631020 CFC1BP0CG36 223 aa11.71□□□□□ -0.53
PNKP-224ENST00000631020 CFC1P0CG37 223 aa11.71□□□□□ -0.53
PNKP-224ENST00000631020 ARL17AQ8IVW1 177 aa11.71□□□□□ -0.53
PNKP-224ENST00000631020 KRTAP29-1A8MX34 341 aaPredicted RBP11.7□□□□□ -0.54
PNKP-224ENST00000631020 H3BMG7 143 aa11.7□□□□□ -0.54
PNKP-224ENST00000631020 COPS9Q8WXC6 57 aa11.7□□□□□ -0.54
PNKP-224ENST00000631020 MIR7-3HGQ8N6C7 128 aa11.7□□□□□ -0.54
PNKP-224ENST00000631020 A4D1N5 150 aa11.69□□□□□ -0.54
PNKP-224ENST00000631020 IFITM1P13164 125 aa11.69□□□□□ -0.54
PNKP-224ENST00000631020 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
PNKP-224ENST00000631020 MUSTN1Q8IVN3 82 aa11.69□□□□□ -0.54
PNKP-224ENST00000631020 DAND5Q8N907 189 aa11.69□□□□□ -0.54
PNKP-224ENST00000631020 J3QL48 77 aa11.68□□□□□ -0.54
PNKP-224ENST00000631020 PSMB2P49721 201 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms