RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 IL36BQ9NZH7 164 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 OR5AC2Q9NZP5 309 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 COPZ2Q9P299 210 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 ANAPC10Q9UM13 185 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 C22orf24Q9Y442 160 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 TRBV20-1A0A075B6N2 111 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 LINC00959A0A1B0GUT2 108 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 F6UZH7 168 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 H3BT86 120 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 M0R036 132 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 NDUFA1O15239 70 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 CST7O76096 145 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 TCRAP04437 139 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 ARMS2P0C7Q2 107 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 PYYP10082 97 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 RPL12P30050 165 aaKnown RBP0.51□□□□□ -2.33
VBP1-204ENST00000625964 MT4P47944 62 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 RANP62826 216 aaKnown RBP0.51□□□□□ -2.33
VBP1-204ENST00000625964 FABP5Q01469 135 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 IAH1Q2TAA2 248 aaPredicted RBP0.51□□□□□ -2.33
VBP1-204ENST00000625964 SPANXN5Q5MJ07 72 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 SSBP3-AS1Q7Z2R9 100 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 KRTAP8-1Q8IUC2 63 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 OR5H6Q8NGV6 325 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 PFDN5Q99471 154 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 SLC25A21Q9BQT8 299 aaPredicted RBP0.51□□□□□ -2.33
VBP1-204ENST00000625964 NMES1Q9C002 83 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 AP4S1Q9Y587 144 aa0.51□□□□□ -2.33
VBP1-204ENST00000625964 TRAV7A0A075B6U4 112 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 FXYD6-FXYD2A0A087WZ82 144 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 FAM236DA0A1B0GTK5 79 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 TRDV1A0A1B0GX56 115 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 FABP5P3A8MUU1 101 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 H3BVH4 76 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 COX7A2LO14548 114 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 MT1BP07438 61 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 FAM236CP0DP71 79 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 SLC25A6P12236 298 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 TPT1P13693 172 aaKnown RBP0.5□□□□□ -2.33
VBP1-204ENST00000625964 FGF7P21781 194 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 RRAS2P62070 204 aaPredicted RBP0.5□□□□□ -2.33
VBP1-204ENST00000625964 PRLHP81277 87 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 SPAG11BQ08648 103 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 MLLT11Q13015 90 aaPredicted RBP0.5□□□□□ -2.33
VBP1-204ENST00000625964 PPP1R1AQ13522 171 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 ZNF56Q15929 161 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 DNAL1Q4LDG9 190 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 MIC13Q5XKP0 118 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 TMEM14EPQ6UXP3 125 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 ATP11AUNQ6ZP68 121 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 CLVS1Q8IUQ0 354 aaPredicted RBP0.5□□□□□ -2.33
VBP1-204ENST00000625964 S100A16Q96FQ6 103 aaKnown RBP0.5□□□□□ -2.33
VBP1-204ENST00000625964 BTF3L4Q96K17 158 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 FAM167A-AS1Q96KT0 104 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 SPRR4Q96PI1 79 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 MGST2Q99735 147 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 GGACTQ9BVM4 153 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 LYRM2Q9NU23 88 aaPredicted RBP0.5□□□□□ -2.33
VBP1-204ENST00000625964 SCN3BQ9NY72 215 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 C6orf48Q9UBA6 75 aa0.5□□□□□ -2.33
VBP1-204ENST00000625964 RSL24D1Q9UHA3 163 aaKnown RBP0.5□□□□□ -2.33
VBP1-204ENST00000625964 LSM2Q9Y333 95 aaKnown RBP0.5□□□□□ -2.33
VBP1-204ENST00000625964 PIGBOS1A0A0B4J2F0 54 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 TRBV30A0A0K0K1B3 111 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 ZNF727A8MUV8 499 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 C1orf196B1AJZ1 125 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 M0QY20 66 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 PPBPP02775 128 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 ZNF25P17030 456 aaPredicted RBP0.49□□□□□ -2.33
VBP1-204ENST00000625964 NKX2-5P52952 324 aaPredicted RBP0.49□□□□□ -2.33
VBP1-204ENST00000625964 TMBIM6P55061 237 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 UBE2G2P60604 165 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 RAB14P61106 215 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 HIST1H4AP62805 103 aaKnown RBP0.49□□□□□ -2.33
VBP1-204ENST00000625964 COTL1Q14019 142 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 C4orf26Q17RF5 130 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 RNASE10Q5GAN6 216 aaKnown RBP0.49□□□□□ -2.33
VBP1-204ENST00000625964 FAM74A1Q5RGS3 127 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 SAPCD1Q5SSQ6 148 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 Q5VV11 94 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 GOLT1AQ6ZVE7 132 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 MIR17HGQ75NE6 70 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 C5orf38Q86SI9 138 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 AP3S1Q92572 193 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 ANP32BQ92688 251 aaKnown RBP0.49□□□□□ -2.33
VBP1-204ENST00000625964 HYLS1Q96M11 299 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 C9orf16Q9BUW7 83 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 CCDC32Q9BV29 185 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 XAGE1AQ9HD64 81 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 OTORQ9NRC9 128 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 CDC42SE2Q9NRR3 84 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 PSENENQ9NZ42 101 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 NAT8Q9UHE5 227 aa0.49□□□□□ -2.33
VBP1-204ENST00000625964 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.48□□□□□ -2.33
VBP1-204ENST00000625964 ATP6V1G2O95670 118 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 NCR2O95944 276 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 CD3DP04234 171 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 METTL15P1P0C7V9 234 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 TRGC1P0CF51 173 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 SMIM17P0DL12 118 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms