RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 LBHQ53QV2 105 aaPredicted RBP12.98□□□□□ -0.33
PMPCA-212ENST00000622209 TP73-AS1Q9UF72 201 aa12.98□□□□□ -0.33
PMPCA-212ENST00000622209 LRP2P98164 4655 aa12.97□□□□□ -0.33
PMPCA-212ENST00000622209 LINC00587B1AMM8 73 aa12.97□□□□□ -0.33
PMPCA-212ENST00000622209 SND1-IT1Q9HBX3 110 aa12.97□□□□□ -0.33
PMPCA-212ENST00000622209 J3QQQ9 107 aa12.96□□□□□ -0.33
PMPCA-212ENST00000622209 LINC00158P58513 81 aa12.96□□□□□ -0.33
PMPCA-212ENST00000622209 UBE2BP63146 152 aa12.96□□□□□ -0.33
PMPCA-212ENST00000622209 SPINK6Q6UWN8 80 aa12.96□□□□□ -0.33
PMPCA-212ENST00000622209 IGLV5-37A0A075B6J1 123 aa12.95□□□□□ -0.34
PMPCA-212ENST00000622209 TSPEAR-AS2P59090 65 aa12.95□□□□□ -0.34
PMPCA-212ENST00000622209 KRTDAPP60985 99 aa12.95□□□□□ -0.34
PMPCA-212ENST00000622209 NMUP48645 174 aa12.94□□□□□ -0.34
PMPCA-212ENST00000622209 C1orf137Q5JT78 98 aa12.94□□□□□ -0.34
PMPCA-212ENST00000622209 MRPL55Q7Z7F7 128 aaKnown RBP12.94□□□□□ -0.34
PMPCA-212ENST00000622209 RNF213Q63HN8 5207 aa12.94□□□□□ -0.34
PMPCA-212ENST00000622209 E9PLD3 99 aa12.93□□□□□ -0.34
PMPCA-212ENST00000622209 LGALS3P17931 250 aaKnown RBP12.93□□□□□ -0.34
PMPCA-212ENST00000622209 SRSF9Q13242 221 aaKnown RBP eCLIP12.93□□□□□ -0.34
PMPCA-212ENST00000622209 MEIG1Q5JSS6 88 aa12.93□□□□□ -0.34
PMPCA-212ENST00000622209 REG3GQ6UW15 175 aa12.93□□□□□ -0.34
PMPCA-212ENST00000622209 KRTAP11-1Q8IUC1 163 aa12.93□□□□□ -0.34
PMPCA-212ENST00000622209 SMIM13P0DJ93 91 aa12.92□□□□□ -0.34
PMPCA-212ENST00000622209 S100A6P06703 90 aa12.91□□□□□ -0.34
PMPCA-212ENST00000622209 KRTAP10-8P60410 259 aa12.91□□□□□ -0.34
PMPCA-212ENST00000622209 RPL24P83731 157 aaKnown RBP12.91□□□□□ -0.34
PMPCA-212ENST00000622209 HIST3H2BBQ8N257 126 aa12.91□□□□□ -0.34
PMPCA-212ENST00000622209 NKAPP1Q8N9T2 125 aa12.91□□□□□ -0.34
PMPCA-212ENST00000622209 A0A0U1RRA0 63 aa12.9□□□□□ -0.34
PMPCA-212ENST00000622209 C20orf202A1L168 122 aa12.9□□□□□ -0.34
PMPCA-212ENST00000622209 S100A2P29034 98 aa12.89□□□□□ -0.35
PMPCA-212ENST00000622209 LINC00167Q96N53 147 aa12.89□□□□□ -0.35
PMPCA-212ENST00000622209 IGLV7-43P04211 117 aa12.88□□□□□ -0.35
PMPCA-212ENST00000622209 VPREB1P12018 145 aa12.88□□□□□ -0.35
PMPCA-212ENST00000622209 AKR1D1P51857 326 aa12.88□□□□□ -0.35
PMPCA-212ENST00000622209 MIR7-3HGQ8N6C7 128 aa12.87□□□□□ -0.35
PMPCA-212ENST00000622209 HIST1H2BLQ99880 126 aa12.86□□□□□ -0.35
PMPCA-212ENST00000622209 GAGE10A6NGK3 116 aa12.84□□□□□ -0.35
PMPCA-212ENST00000622209 RPL37AP8A6NKH3 93 aa12.83□□□□□ -0.36
PMPCA-212ENST00000622209 Q8NDZ9 215 aa12.82□□□□□ -0.36
PMPCA-212ENST00000622209 SNRPEP62304 92 aaKnown RBP12.81□□□□□ -0.36
PMPCA-212ENST00000622209 DIRC1Q969H9 104 aa12.81□□□□□ -0.36
PMPCA-212ENST00000622209 LOC107984156A0A0G2JMH3 177 aa12.8□□□□□ -0.36
PMPCA-212ENST00000622209 A0A0J9YXY3 114 aa12.8□□□□□ -0.36
PMPCA-212ENST00000622209 ARL17AQ8IVW1 177 aa12.8□□□□□ -0.36
PMPCA-212ENST00000622209 BOD1L2Q8IYS8 172 aa12.8□□□□□ -0.36
PMPCA-212ENST00000622209 IGLV1-50A0A075B6I6 118 aa12.79□□□□□ -0.36
PMPCA-212ENST00000622209 IGKV2D-26A0A0A0MRZ7 120 aa12.79□□□□□ -0.36
PMPCA-212ENST00000622209 C5orf52A6NGY3 159 aa12.78□□□□□ -0.36
PMPCA-212ENST00000622209 M0R378 163 aa12.78□□□□□ -0.36
PMPCA-212ENST00000622209 BCE1O60756 84 aa12.78□□□□□ -0.36
PMPCA-212ENST00000622209 IGKV2-28A0A075B6P5 120 aa12.77□□□□□ -0.37
PMPCA-212ENST00000622209 IGKV2D-28P01615 120 aa12.77□□□□□ -0.37
PMPCA-212ENST00000622209 ATOH7Q8N100 152 aa12.77□□□□□ -0.37
PMPCA-212ENST00000622209 DAND5Q8N907 189 aa12.77□□□□□ -0.37
PMPCA-212ENST00000622209 ZNF815PA8K554 130 aa12.76□□□□□ -0.37
PMPCA-212ENST00000622209 ZNF861PO60384 105 aa12.76□□□□□ -0.37
PMPCA-212ENST00000622209 H0Y9J4 135 aa12.75□□□□□ -0.37
PMPCA-212ENST00000622209 TIMM17BO60830 172 aa12.75□□□□□ -0.37
PMPCA-212ENST00000622209 MIEN1Q9BRT3 115 aa12.75□□□□□ -0.37
PMPCA-212ENST00000622209 ANKRD39Q53RE8 183 aa12.74□□□□□ -0.37
PMPCA-212ENST00000622209 ADAMTSL4-AS1Q5T5F5 129 aa12.74□□□□□ -0.37
PMPCA-212ENST00000622209 RPL28P46779 137 aaKnown RBP12.73□□□□□ -0.37
PMPCA-212ENST00000622209 TTTY13Q9BZ97 58 aa12.72□□□□□ -0.37
PMPCA-212ENST00000622209 LITAFQ99732 161 aa12.71□□□□□ -0.37
PMPCA-212ENST00000622209 TMEM126AQ9H061 195 aa12.71□□□□□ -0.37
PMPCA-212ENST00000622209 NCR3O14931 201 aa12.7□□□□□ -0.38
PMPCA-212ENST00000622209 NDUFC2O95298 119 aa12.7□□□□□ -0.38
PMPCA-212ENST00000622209 TRBV10-2A0A0K0K1G8 114 aa12.69□□□□□ -0.38
PMPCA-212ENST00000622209 TMEM238C9JI98 176 aa12.68□□□□□ -0.38
PMPCA-212ENST00000622209 UBE2AP49459 152 aa12.68□□□□□ -0.38
PMPCA-212ENST00000622209 SOSTDC1Q6X4U4 206 aa12.68□□□□□ -0.38
PMPCA-212ENST00000622209 PRR26Q8N8Z3 221 aa12.68□□□□□ -0.38
PMPCA-212ENST00000622209 SPANXB1Q9NS25 103 aaPredicted RBP12.68□□□□□ -0.38
PMPCA-212ENST00000622209 HSBP1L1C9JCN9 74 aa12.67□□□□□ -0.38
PMPCA-212ENST00000622209 KRTAP13-1Q8IUC0 172 aa12.67□□□□□ -0.38
PMPCA-212ENST00000622209 SCGB1D1O95968 90 aa12.66□□□□□ -0.38
PMPCA-212ENST00000622209 NPC2P61916 151 aa12.66□□□□□ -0.38
PMPCA-212ENST00000622209 SCGB1D4Q6XE38 83 aa12.66□□□□□ -0.38
PMPCA-212ENST00000622209 LINC00308Q8TCZ7 52 aa12.66□□□□□ -0.38
PMPCA-212ENST00000622209 PRYO14603 147 aa12.65□□□□□ -0.38
PMPCA-212ENST00000622209 KCNQ1DNQ9H478 68 aa12.65□□□□□ -0.38
PMPCA-212ENST00000622209 EIF4EBP3O60516 100 aaPredicted RBP12.64□□□□□ -0.39
PMPCA-212ENST00000622209 FAM19A1Q7Z5A9 133 aa12.64□□□□□ -0.39
PMPCA-212ENST00000622209 PCP2Q8IVA1 136 aa12.64□□□□□ -0.39
PMPCA-212ENST00000622209 LPAP08519 4548 aa12.63□□□□□ -0.39
PMPCA-212ENST00000622209 TRBV10-3A0A0K0K1G6 114 aa12.63□□□□□ -0.39
PMPCA-212ENST00000622209 S100A12P80511 92 aa12.63□□□□□ -0.39
PMPCA-212ENST00000622209 SPANXDQ9BXN6 97 aa12.63□□□□□ -0.39
PMPCA-212ENST00000622209 SPANXCQ9NY87 97 aa12.63□□□□□ -0.39
PMPCA-212ENST00000622209 KRTAP1-4P0C5Y4 121 aa12.62□□□□□ -0.39
PMPCA-212ENST00000622209 DDTP30046 118 aa12.62□□□□□ -0.39
PMPCA-212ENST00000622209 SPRR1AP35321 89 aa12.6□□□□□ -0.39
PMPCA-212ENST00000622209 S100A7L2Q5SY68 101 aa12.6□□□□□ -0.39
PMPCA-212ENST00000622209 Q6ZVH6 145 aa12.6□□□□□ -0.39
PMPCA-212ENST00000622209 LINC00337Q8N6G1 96 aa12.6□□□□□ -0.39
PMPCA-212ENST00000622209 COPS9Q8WXC6 57 aa12.6□□□□□ -0.39
PMPCA-212ENST00000622209 IGLV6-57P01721 117 aa12.59□□□□□ -0.39
PMPCA-212ENST00000622209 PRLHP81277 87 aa12.59□□□□□ -0.39
PMPCA-212ENST00000622209 IFITM1P13164 125 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms