RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 CD164Q04900 197 aa7.47□□□□□ -1.21
CDH1-214ENST00000621016 TM2D3Q9BRN9 247 aa7.47□□□□□ -1.21
CDH1-214ENST00000621016 GYPEP15421 78 aa7.47□□□□□ -1.21
CDH1-214ENST00000621016 FAM222AQ5U5X8 452 aa7.47□□□□□ -1.21
CDH1-214ENST00000621016 SPTSSBQ8NFR3 76 aa7.47□□□□□ -1.21
CDH1-214ENST00000621016 SND1-IT1Q9HBX3 110 aa7.47□□□□□ -1.21
CDH1-214ENST00000621016 PRR4Q16378 134 aa7.46□□□□□ -1.21
CDH1-214ENST00000621016 Q8N3U1 123 aa7.46□□□□□ -1.21
CDH1-214ENST00000621016 TRRAPQ9Y4A5 3859 aa7.46□□□□□ -1.21
CDH1-214ENST00000621016 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.22
CDH1-214ENST00000621016 PRR3P79522 188 aaKnown RBP7.46□□□□□ -1.22
CDH1-214ENST00000621016 COX7B2Q8TF08 81 aa7.46□□□□□ -1.22
CDH1-214ENST00000621016 NOTCH1P46531 2555 aa7.46□□□□□ -1.22
CDH1-214ENST00000621016 IGLV5-39A0A0G2JS06 123 aa7.45□□□□□ -1.22
CDH1-214ENST00000621016 CRPP02741 224 aa7.45□□□□□ -1.22
CDH1-214ENST00000621016 SPATA3Q8NHX4 192 aa7.45□□□□□ -1.22
CDH1-214ENST00000621016 PKD1L1Q8TDX9 2849 aa7.45□□□□□ -1.22
CDH1-214ENST00000621016 C16orf74Q96GX8 76 aa7.45□□□□□ -1.22
CDH1-214ENST00000621016 PLAC8L1A1L4L8 177 aa7.45□□□□□ -1.22
CDH1-214ENST00000621016 IGLV5-45A0A087WSX0 123 aa7.44□□□□□ -1.22
CDH1-214ENST00000621016 TRBV6-8A0A0A6YYG3 113 aa7.44□□□□□ -1.22
CDH1-214ENST00000621016 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
CDH1-214ENST00000621016 DEFB135Q30KP9 77 aa7.44□□□□□ -1.22
CDH1-214ENST00000621016 LINC00337Q8N6G1 96 aa7.44□□□□□ -1.22
CDH1-214ENST00000621016 TRAV7A0A075B6U4 112 aa7.43□□□□□ -1.22
CDH1-214ENST00000621016 IGLV1-51P01701 117 aa7.43□□□□□ -1.22
CDH1-214ENST00000621016 STAB1Q9NY15 2570 aa7.43□□□□□ -1.22
CDH1-214ENST00000621016 H3BS24 57 aa7.42□□□□□ -1.22
CDH1-214ENST00000621016 UBL5Q9BZL1 73 aa7.42□□□□□ -1.22
CDH1-214ENST00000621016 MAST4O15021 2626 aa7.42□□□□□ -1.22
CDH1-214ENST00000621016 MIFP14174 115 aa7.42□□□□□ -1.22
CDH1-214ENST00000621016 SMIM11BQ8TCY0 68 aa7.42□□□□□ -1.22
CDH1-214ENST00000621016 NSD1Q96L73 2696 aaPredicted RBP7.42□□□□□ -1.22
CDH1-214ENST00000621016 FBN1P35555 2871 aaKnown RBP7.41□□□□□ -1.22
CDH1-214ENST00000621016 C9orf116Q5BN46 136 aaPredicted RBP7.41□□□□□ -1.22
CDH1-214ENST00000621016 COPS9Q8WXC6 57 aa7.41□□□□□ -1.22
CDH1-214ENST00000621016 NBEAL1Q6ZS30 2694 aa7.41□□□□□ -1.22
CDH1-214ENST00000621016 CCL18P55774 89 aa7.41□□□□□ -1.22
CDH1-214ENST00000621016 C19orf73Q9NVV2 129 aa7.41□□□□□ -1.22
CDH1-214ENST00000621016 TRBV6-4A0A1B0GX49 114 aa7.4□□□□□ -1.22
CDH1-214ENST00000621016 M0R2N4 97 aa7.4□□□□□ -1.22
CDH1-214ENST00000621016 LINC00269Q8N2A0 174 aa7.4□□□□□ -1.22
CDH1-214ENST00000621016 ANGP03950 147 aaKnown RBP7.4□□□□□ -1.23
CDH1-214ENST00000621016 KLKP1Q107X0 134 aa7.4□□□□□ -1.23
CDH1-214ENST00000621016 ESRGQ1W209 222 aa7.4□□□□□ -1.23
CDH1-214ENST00000621016 TRAV13-2A0A0B4J235 113 aa7.39□□□□□ -1.23
CDH1-214ENST00000621016 CSNK1G2-AS1Q8NCQ2 148 aa7.39□□□□□ -1.23
CDH1-214ENST00000621016 IGKV2-28A0A075B6P5 120 aa7.39□□□□□ -1.23
CDH1-214ENST00000621016 IGKV2D-28P01615 120 aa7.39□□□□□ -1.23
CDH1-214ENST00000621016 IGHV3OR16-9A0A0B4J2B5 98 aa7.39□□□□□ -1.23
CDH1-214ENST00000621016 LINC00959A0A1B0GUT2 108 aa7.39□□□□□ -1.23
CDH1-214ENST00000621016 Q8N9L7 120 aa7.39□□□□□ -1.23
CDH1-214ENST00000621016 KRTAP10-3P60369 221 aa7.38□□□□□ -1.23
CDH1-214ENST00000621016 KRTAP1-1Q07627 177 aa7.38□□□□□ -1.23
CDH1-214ENST00000621016 F8P00451 2351 aa7.37□□□□□ -1.23
CDH1-214ENST00000621016 APOC4P55056 127 aa7.37□□□□□ -1.23
CDH1-214ENST00000621016 ORMDL1Q9P0S3 153 aa7.37□□□□□ -1.23
CDH1-214ENST00000621016 FUSP35637 526 aaKnown RBP eCLIP7.37□□□□□ -1.23
CDH1-214ENST00000621016 PRR15Q8IV56 129 aa7.37□□□□□ -1.23
CDH1-214ENST00000621016 TMEM254Q8TBM7 123 aa7.35□□□□□ -1.23
CDH1-214ENST00000621016 INAFM1C9JVW0 142 aa7.35□□□□□ -1.23
CDH1-214ENST00000621016 Q6ZRU5 148 aa7.35□□□□□ -1.23
CDH1-214ENST00000621016 A8MUN3 132 aa7.34□□□□□ -1.23
CDH1-214ENST00000621016 CMC4P56277 68 aaPredicted RBP7.34□□□□□ -1.23
CDH1-214ENST00000621016 OVOL2Q9BRP0 275 aa7.34□□□□□ -1.23
CDH1-214ENST00000621016 HIGD2AQ9BW72 106 aa7.34□□□□□ -1.23
CDH1-214ENST00000621016 LINC01547P58512 204 aaPredicted RBP7.34□□□□□ -1.24
CDH1-214ENST00000621016 PRO0255Q9UI72 69 aa7.34□□□□□ -1.24
CDH1-214ENST00000621016 BAHCC1Q9P281 2608 aa7.33□□□□□ -1.24
CDH1-214ENST00000621016 COL6A5A8TX70 2615 aa7.33□□□□□ -1.24
CDH1-214ENST00000621016 NREPQ16612 68 aa7.32□□□□□ -1.24
CDH1-214ENST00000621016 LAMTOR3Q9UHA4 124 aa7.32□□□□□ -1.24
CDH1-214ENST00000621016 LY6G6DO95868 133 aa7.32□□□□□ -1.24
CDH1-214ENST00000621016 Q6ZRP5 223 aa7.32□□□□□ -1.24
CDH1-214ENST00000621016 CHCHD10Q8WYQ3 142 aaPredicted RBP7.32□□□□□ -1.24
CDH1-214ENST00000621016 CELA1Q9UNI1 258 aa7.32□□□□□ -1.24
CDH1-214ENST00000621016 X6R8D5 127 aa7.32□□□□□ -1.24
CDH1-214ENST00000621016 J3QKU1 62 aa7.31□□□□□ -1.24
CDH1-214ENST00000621016 KLK12Q9UKR0 248 aa7.31□□□□□ -1.24
CDH1-214ENST00000621016 IBA57-AS1B1ANH7 110 aa7.31□□□□□ -1.24
CDH1-214ENST00000621016 ANK3Q12955 4377 aaKnown RBP7.31□□□□□ -1.24
CDH1-214ENST00000621016 IGHV4-28A0A0C4DH34 117 aa7.3□□□□□ -1.24
CDH1-214ENST00000621016 REG3AQ06141 175 aa7.3□□□□□ -1.24
CDH1-214ENST00000621016 TENM3Q9P273 2699 aa7.3□□□□□ -1.24
CDH1-214ENST00000621016 TMEM256-PLSCR3K7ERE1 68 aa7.29□□□□□ -1.24
CDH1-214ENST00000621016 XAGE1AQ9HD64 81 aa7.29□□□□□ -1.24
CDH1-214ENST00000621016 UNQ6190/PRO20217Q6UXQ8 127 aa7.29□□□□□ -1.24
CDH1-214ENST00000621016 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
CDH1-214ENST00000621016 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.29□□□□□ -1.24
CDH1-214ENST00000621016 Q6ZVQ6 151 aa7.29□□□□□ -1.24
CDH1-214ENST00000621016 FAM19A3Q7Z5A8 133 aa7.28□□□□□ -1.24
CDH1-214ENST00000621016 TRAV22A0A0B4J277 110 aa7.28□□□□□ -1.24
CDH1-214ENST00000621016 PRYO14603 147 aa7.27□□□□□ -1.24
CDH1-214ENST00000621016 TRBV7-4A0A0J9YYF1 115 aa7.27□□□□□ -1.25
CDH1-214ENST00000621016 C6orf99Q4VX62 202 aa7.27□□□□□ -1.25
CDH1-214ENST00000621016 ATP5EP2Q5VTU8 51 aa7.27□□□□□ -1.25
CDH1-214ENST00000621016 BPY2O14599 106 aa7.27□□□□□ -1.25
CDH1-214ENST00000621016 OBSCN-AS1Q96MR7 158 aa7.27□□□□□ -1.25
CDH1-214ENST00000621016 H0YGX0 51 aa7.26□□□□□ -1.25
CDH1-214ENST00000621016 CHKB-CPT1BH3BT56 60 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms