RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 BPY2O14599 106 aa7.2□□□□□ -1.26
VPS11-207ENST00000620429 LINC00158P58513 81 aa7.2□□□□□ -1.26
VPS11-207ENST00000620429 ITPR3Q14573 2671 aa7.19□□□□□ -1.26
VPS11-207ENST00000620429 CUBNO60494 3623 aa7.19□□□□□ -1.26
VPS11-207ENST00000620429 COX7B2Q8TF08 81 aa7.19□□□□□ -1.26
VPS11-207ENST00000620429 CR1P17927 2039 aa7.19□□□□□ -1.26
VPS11-207ENST00000620429 PDE6GP18545 87 aa7.19□□□□□ -1.26
VPS11-207ENST00000620429 FSHBP01225 129 aa7.18□□□□□ -1.26
VPS11-207ENST00000620429 C9orf66Q5T8R8 295 aa7.18□□□□□ -1.26
VPS11-207ENST00000620429 C18orf65Q6ZTR6 163 aa7.18□□□□□ -1.26
VPS11-207ENST00000620429 NOTCH3Q9UM47 2321 aa7.18□□□□□ -1.26
VPS11-207ENST00000620429 K7EQD1 137 aa7.18□□□□□ -1.26
VPS11-207ENST00000620429 Q6YL49 198 aa7.18□□□□□ -1.26
VPS11-207ENST00000620429 NTM-AS1Q6ZSK4 140 aa7.18□□□□□ -1.26
VPS11-207ENST00000620429 ZNF702PQ9H963 129 aa7.18□□□□□ -1.26
VPS11-207ENST00000620429 LYRM9A8MSI8 78 aa7.17□□□□□ -1.26
VPS11-207ENST00000620429 M0R2N4 97 aa7.17□□□□□ -1.26
VPS11-207ENST00000620429 OCR1Q9BZK8 76 aa7.17□□□□□ -1.26
VPS11-207ENST00000620429 DEFB136Q30KP8 78 aa7.17□□□□□ -1.26
VPS11-207ENST00000620429 LINC00588Q9Y4M8 146 aa7.17□□□□□ -1.26
VPS11-207ENST00000620429 SETD2Q9BYW2 2564 aaPredicted RBP7.17□□□□□ -1.26
VPS11-207ENST00000620429 NANOS2P60321 138 aaKnown RBP7.16□□□□□ -1.26
VPS11-207ENST00000620429 FBN3Q75N90 2809 aa7.16□□□□□ -1.26
VPS11-207ENST00000620429 TRAV22A0A0B4J277 110 aa7.15□□□□□ -1.26
VPS11-207ENST00000620429 SLURP1P55000 103 aa7.15□□□□□ -1.26
VPS11-207ENST00000620429 CDC42SE2Q9NRR3 84 aa7.15□□□□□ -1.26
VPS11-207ENST00000620429 A8MTW9 85 aa7.15□□□□□ -1.26
VPS11-207ENST00000620429 C11orf44Q8N8P7 122 aa7.15□□□□□ -1.26
VPS11-207ENST00000620429 MDFIQ99750 246 aa7.15□□□□□ -1.26
VPS11-207ENST00000620429 FLNAP21333 2647 aaKnown RBP7.15□□□□□ -1.27
VPS11-207ENST00000620429 UBE2BP63146 152 aa7.14□□□□□ -1.27
VPS11-207ENST00000620429 INSP01308 110 aa7.14□□□□□ -1.27
VPS11-207ENST00000620429 UBE2E2Q96LR5 201 aa7.14□□□□□ -1.27
VPS11-207ENST00000620429 PSPHP1O15172 72 aa7.13□□□□□ -1.27
VPS11-207ENST00000620429 C1orf64Q8NEQ6 169 aa7.13□□□□□ -1.27
VPS11-207ENST00000620429 ACANP16112 2415 aa7.13□□□□□ -1.27
VPS11-207ENST00000620429 TRGV1A0A0A0MS02 117 aa7.13□□□□□ -1.27
VPS11-207ENST00000620429 M0R378 163 aa7.13□□□□□ -1.27
VPS11-207ENST00000620429 RNASE1P07998 156 aaKnown RBP7.13□□□□□ -1.27
VPS11-207ENST00000620429 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
VPS11-207ENST00000620429 CD164L2Q6UWJ8 174 aa7.13□□□□□ -1.27
VPS11-207ENST00000620429 SMR3AQ99954 134 aa7.13□□□□□ -1.27
VPS11-207ENST00000620429 MAP6D1Q9H9H5 199 aa7.13□□□□□ -1.27
VPS11-207ENST00000620429 NSD1Q96L73 2696 aaPredicted RBP7.12□□□□□ -1.27
VPS11-207ENST00000620429 INAFM1C9JVW0 142 aa7.12□□□□□ -1.27
VPS11-207ENST00000620429 KRTAP1-1Q07627 177 aa7.12□□□□□ -1.27
VPS11-207ENST00000620429 HIGD2AQ9BW72 106 aa7.12□□□□□ -1.27
VPS11-207ENST00000620429 NDUFS5O43920 106 aa7.11□□□□□ -1.27
VPS11-207ENST00000620429 TOMM7Q9P0U1 55 aa7.11□□□□□ -1.27
VPS11-207ENST00000620429 MTORP42345 2549 aa7.11□□□□□ -1.27
VPS11-207ENST00000620429 H3BQ85 93 aa7.11□□□□□ -1.27
VPS11-207ENST00000620429 KHDC1LQ5JSQ8 128 aa7.11□□□□□ -1.27
VPS11-207ENST00000620429 LINC00575Q6W349 94 aa7.11□□□□□ -1.27
VPS11-207ENST00000620429 LRCOL1A6NCL2 159 aa7.1□□□□□ -1.27
VPS11-207ENST00000620429 SCXQ7RTU7 201 aa7.1□□□□□ -1.27
VPS11-207ENST00000620429 WNK1Q9H4A3 2382 aa7.1□□□□□ -1.27
VPS11-207ENST00000620429 UBE2L6O14933 153 aa7.1□□□□□ -1.27
VPS11-207ENST00000620429 C11orf45Q8TAV5 145 aa7.1□□□□□ -1.27
VPS11-207ENST00000620429 NIPBLQ6KC79 2804 aaeCLIP7.1□□□□□ -1.27
VPS11-207ENST00000620429 APOC4P55056 127 aa7.09□□□□□ -1.27
VPS11-207ENST00000620429 MUC7Q8TAX7 377 aa7.09□□□□□ -1.27
VPS11-207ENST00000620429 IGKV3OR2-268A0A0C4DH90 116 aa7.09□□□□□ -1.27
VPS11-207ENST00000620429 LCE6AA0A183 80 aa7.09□□□□□ -1.27
VPS11-207ENST00000620429 PHF5AQ7RTV0 110 aaKnown RBP7.09□□□□□ -1.27
VPS11-207ENST00000620429 ANK3Q12955 4377 aaKnown RBP7.08□□□□□ -1.28
VPS11-207ENST00000620429 IGKV4-1P06312 121 aa7.08□□□□□ -1.28
VPS11-207ENST00000620429 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
VPS11-207ENST00000620429 DNHD1Q96M86 4753 aa7.08□□□□□ -1.28
VPS11-207ENST00000620429 FN1P02751 2386 aaKnown RBP7.08□□□□□ -1.28
VPS11-207ENST00000620429 A8MUN3 132 aa7.07□□□□□ -1.28
VPS11-207ENST00000620429 PSCAO43653 123 aa7.07□□□□□ -1.28
VPS11-207ENST00000620429 IGHV3OR16-9A0A0B4J2B5 98 aa7.07□□□□□ -1.28
VPS11-207ENST00000620429 A8MU10 97 aa7.07□□□□□ -1.28
VPS11-207ENST00000620429 UBE2AP49459 152 aa7.07□□□□□ -1.28
VPS11-207ENST00000620429 Q5VV11 94 aa7.07□□□□□ -1.28
VPS11-207ENST00000620429 ESM1Q9NQ30 184 aa7.07□□□□□ -1.28
VPS11-207ENST00000620429 DEFB114Q30KQ6 69 aa7.06□□□□□ -1.28
VPS11-207ENST00000620429 C6orf99Q4VX62 202 aa7.06□□□□□ -1.28
VPS11-207ENST00000620429 DNAJC9-AS1A6NH13 148 aa7.06□□□□□ -1.28
VPS11-207ENST00000620429 HIVEP2P31629 2446 aa7.06□□□□□ -1.28
VPS11-207ENST00000620429 LINC00269Q8N2A0 174 aa7.05□□□□□ -1.28
VPS11-207ENST00000620429 TRBV6-8A0A0A6YYG3 113 aa7.05□□□□□ -1.28
VPS11-207ENST00000620429 C16orf90A8MZG2 172 aa7.05□□□□□ -1.28
VPS11-207ENST00000620429 ATP11AUNQ6ZP68 121 aa7.05□□□□□ -1.28
VPS11-207ENST00000620429 ZCCHC13Q8WW36 166 aaKnown RBP7.05□□□□□ -1.28
VPS11-207ENST00000620429 ODF3L2Q3SX64 289 aa7.04□□□□□ -1.28
VPS11-207ENST00000620429 NOP10Q9NPE3 64 aaKnown RBP7.04□□□□□ -1.28
VPS11-207ENST00000620429 LOC100131303A0A0U1RQF7 123 aa7.04□□□□□ -1.28
VPS11-207ENST00000620429 C4orf3Q8WVX3 66 aa7.04□□□□□ -1.28
VPS11-207ENST00000620429 ZNF73O43830 326 aaPredicted RBP7.03□□□□□ -1.28
VPS11-207ENST00000620429 JMJD1CQ15652 2540 aa7.03□□□□□ -1.28
VPS11-207ENST00000620429 A6NN06 94 aa7.03□□□□□ -1.28
VPS11-207ENST00000620429 PRR3P79522 188 aaKnown RBP7.02□□□□□ -1.29
VPS11-207ENST00000620429 LINC01006Q8NI28 216 aa7.02□□□□□ -1.29
VPS11-207ENST00000620429 TRGV2A0A075B6R0 118 aa7.02□□□□□ -1.29
VPS11-207ENST00000620429 IGLV4-60A0A075B6I1 120 aa7.01□□□□□ -1.29
VPS11-207ENST00000620429 Q8N9L7 120 aa7.01□□□□□ -1.29
VPS11-207ENST00000620429 C8orf87E5RJ46 101 aa7□□□□□ -1.29
VPS11-207ENST00000620429 COX7BP24311 80 aa7□□□□□ -1.29
VPS11-207ENST00000620429 Q6ZQY7 126 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms