RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 MED13LQ71F56 2210 aa3□□□□□ -1.93
CHL1-216ENST00000620033 C15orf56Q8N910 161 aa3□□□□□ -1.93
CHL1-216ENST00000620033 C11orf21Q9P2W6 132 aa3□□□□□ -1.93
CHL1-216ENST00000620033 NBASA2RRP1 2371 aa3□□□□□ -1.93
CHL1-216ENST00000620033 A8MTW9 85 aa2.99□□□□□ -1.93
CHL1-216ENST00000620033 CXCL6P80162 114 aa2.99□□□□□ -1.93
CHL1-216ENST00000620033 CRIP3Q6Q6R5 217 aa2.99□□□□□ -1.93
CHL1-216ENST00000620033 Q6ZRX8 168 aa2.99□□□□□ -1.93
CHL1-216ENST00000620033 CUL9Q8IWT3 2517 aa2.99□□□□□ -1.93
CHL1-216ENST00000620033 A0A1B0GU69 56 aa2.99□□□□□ -1.93
CHL1-216ENST00000620033 COLCA2A8K830 154 aa2.99□□□□□ -1.93
CHL1-216ENST00000620033 HIVEP3Q5T1R4 2406 aa2.99□□□□□ -1.93
CHL1-216ENST00000620033 A0A096LNT2 108 aa2.99□□□□□ -1.93
CHL1-216ENST00000620033 C1orf64Q8NEQ6 169 aa2.99□□□□□ -1.93
CHL1-216ENST00000620033 UQCRQO14949 82 aa2.98□□□□□ -1.93
CHL1-216ENST00000620033 TRAV7A0A075B6U4 112 aa2.97□□□□□ -1.93
CHL1-216ENST00000620033 POLR2KP53803 58 aaKnown RBP2.97□□□□□ -1.93
CHL1-216ENST00000620033 SPINT4Q6UDR6 99 aa2.97□□□□□ -1.93
CHL1-216ENST00000620033 SNURFQ9Y675 71 aa2.97□□□□□ -1.93
CHL1-216ENST00000620033 VPREB1P12018 145 aa2.97□□□□□ -1.93
CHL1-216ENST00000620033 LINC00483Q53H64 154 aa2.97□□□□□ -1.93
CHL1-216ENST00000620033 TRIAP1O43715 76 aa2.96□□□□□ -1.93
CHL1-216ENST00000620033 S4R3F8 94 aa2.96□□□□□ -1.93
CHL1-216ENST00000620033 CACNA1HO95180 2353 aa2.96□□□□□ -1.94
CHL1-216ENST00000620033 DLEU1O43261 78 aa2.96□□□□□ -1.94
CHL1-216ENST00000620033 C2orf91Q6ZV80 131 aa2.96□□□□□ -1.94
CHL1-216ENST00000620033 TTTY13Q9BZ97 58 aa2.96□□□□□ -1.94
CHL1-216ENST00000620033 HIGD1BQ9P298 99 aa2.96□□□□□ -1.94
CHL1-216ENST00000620033 PYY3Q5JQD4 70 aa2.96□□□□□ -1.94
CHL1-216ENST00000620033 CNBPP62633 177 aaKnown RBP2.95□□□□□ -1.94
CHL1-216ENST00000620033 Q8N1X5 172 aa2.95□□□□□ -1.94
CHL1-216ENST00000620033 MRPS12O15235 138 aaKnown RBP2.95□□□□□ -1.94
CHL1-216ENST00000620033 ERC2-IT1O76042 136 aa2.95□□□□□ -1.94
CHL1-216ENST00000620033 LRRK2Q5S007 2527 aa2.94□□□□□ -1.94
CHL1-216ENST00000620033 K7EQZ3 153 aa2.94□□□□□ -1.94
CHL1-216ENST00000620033 ATP5EP56381 51 aaPredicted RBP2.94□□□□□ -1.94
CHL1-216ENST00000620033 MRPL34Q9BQ48 92 aaKnown RBP2.94□□□□□ -1.94
CHL1-216ENST00000620033 ROS1P08922 2347 aa2.94□□□□□ -1.94
CHL1-216ENST00000620033 IGFL1Q6UW32 110 aa2.94□□□□□ -1.94
CHL1-216ENST00000620033 LINC00643Q86TS7 51 aa2.94□□□□□ -1.94
CHL1-216ENST00000620033 ABCA2Q9BZC7 2435 aa2.94□□□□□ -1.94
CHL1-216ENST00000620033 TRBV7-7A0A0K0K1E9 115 aa2.94□□□□□ -1.94
CHL1-216ENST00000620033 FXYD2P54710 66 aa2.94□□□□□ -1.94
CHL1-216ENST00000620033 ELOF1P60002 83 aaKnown RBP2.94□□□□□ -1.94
CHL1-216ENST00000620033 A0A0D9SG42 100 aa2.93□□□□□ -1.94
CHL1-216ENST00000620033 A0A1W2PNN7 141 aa2.93□□□□□ -1.94
CHL1-216ENST00000620033 A8MUN3 132 aa2.93□□□□□ -1.94
CHL1-216ENST00000620033 IGLV5-48A0A075B6I7 105 aa2.93□□□□□ -1.94
CHL1-216ENST00000620033 SMIM26A0A096LP01 95 aa2.93□□□□□ -1.94
CHL1-216ENST00000620033 TMEM254Q8TBM7 123 aa2.93□□□□□ -1.94
CHL1-216ENST00000620033 KRTAP10-1P60331 282 aa2.92□□□□□ -1.94
CHL1-216ENST00000620033 SPRR4Q96PI1 79 aa2.92□□□□□ -1.94
CHL1-216ENST00000620033 CSAG1Q6PB30 78 aa2.92□□□□□ -1.94
CHL1-216ENST00000620033 LCA10Q71F78 164 aa2.92□□□□□ -1.94
CHL1-216ENST00000620033 AMELXQ99217 191 aa2.92□□□□□ -1.94
CHL1-216ENST00000620033 DSCAML1Q8TD84 2053 aa2.92□□□□□ -1.94
CHL1-216ENST00000620033 FAM229BQ4G0N7 80 aa2.92□□□□□ -1.94
CHL1-216ENST00000620033 CRIPTQ9P021 101 aa2.92□□□□□ -1.94
CHL1-216ENST00000620033 IGIPA6NJ69 53 aa2.92□□□□□ -1.94
CHL1-216ENST00000620033 LOC101927531A0A1B0GV80 90 aa2.91□□□□□ -1.94
CHL1-216ENST00000620033 SPTAN1Q13813 2472 aaKnown RBP2.91□□□□□ -1.94
CHL1-216ENST00000620033 A8MWP4 228 aa2.91□□□□□ -1.94
CHL1-216ENST00000620033 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.91□□□□□ -1.94
CHL1-216ENST00000620033 ACACBO00763 2458 aa2.91□□□□□ -1.94
CHL1-216ENST00000620033 KRTAP10-2P60368 255 aa2.91□□□□□ -1.94
CHL1-216ENST00000620033 FP248Q71RG6 208 aaPredicted RBP2.91□□□□□ -1.94
CHL1-216ENST00000620033 SORL1Q92673 2214 aa2.9□□□□□ -1.95
CHL1-216ENST00000620033 ATRXP46100 2492 aa2.9□□□□□ -1.95
CHL1-216ENST00000620033 IGLV5-45A0A087WSX0 123 aa2.9□□□□□ -1.95
CHL1-216ENST00000620033 C9orf129Q5T035 196 aaKnown RBP2.9□□□□□ -1.95
CHL1-216ENST00000620033 SMIM29Q86T20 159 aa2.9□□□□□ -1.95
CHL1-216ENST00000620033 MUC4Q99102 2169 aa2.9□□□□□ -1.95
CHL1-216ENST00000620033 A0A1B0GVX0 72 aa2.89□□□□□ -1.95
CHL1-216ENST00000620033 NAV3Q8IVL0 2385 aa2.89□□□□□ -1.95
CHL1-216ENST00000620033 FAM240AA0A1B0GVK7 77 aa2.89□□□□□ -1.95
CHL1-216ENST00000620033 PLAC8Q9NZF1 115 aa2.89□□□□□ -1.95
CHL1-216ENST00000620033 C2CD3Q4AC94 2353 aa2.89□□□□□ -1.95
CHL1-216ENST00000620033 Q6ZQT0 140 aa2.89□□□□□ -1.95
CHL1-216ENST00000620033 GAS8-AS1O95177 125 aa2.89□□□□□ -1.95
CHL1-216ENST00000620033 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
CHL1-216ENST00000620033 PRR15Q8IV56 129 aa2.88□□□□□ -1.95
CHL1-216ENST00000620033 CD164Q04900 197 aa2.88□□□□□ -1.95
CHL1-216ENST00000620033 C8orf17Q9NRJ1 99 aa2.87□□□□□ -1.95
CHL1-216ENST00000620033 CSPG4Q6UVK1 2322 aa2.87□□□□□ -1.95
CHL1-216ENST00000620033 COA6Q5JTJ3 125 aaKnown RBP2.87□□□□□ -1.95
CHL1-216ENST00000620033 RPS28P62857 69 aaKnown RBP2.87□□□□□ -1.95
CHL1-216ENST00000620033 CNFNQ9BYD5 112 aa2.87□□□□□ -1.95
CHL1-216ENST00000620033 R4GN34 69 aa2.86□□□□□ -1.95
CHL1-216ENST00000620033 TRBV7-4A0A0J9YYF1 115 aa2.86□□□□□ -1.95
CHL1-216ENST00000620033 CCDC168Q8NDH2 2452 aa2.86□□□□□ -1.95
CHL1-216ENST00000620033 ADAMTSL4-AS1Q5T5F5 129 aa2.86□□□□□ -1.95
CHL1-216ENST00000620033 NOTCH2Q04721 2471 aa2.86□□□□□ -1.95
CHL1-216ENST00000620033 SONP18583 2426 aaKnown RBP2.86□□□□□ -1.95
CHL1-216ENST00000620033 BDP1A6H8Y1 2624 aa2.85□□□□□ -1.95
CHL1-216ENST00000620033 A0A1B0GW54 56 aa2.85□□□□□ -1.95
CHL1-216ENST00000620033 CR1P17927 2039 aa2.85□□□□□ -1.95
CHL1-216ENST00000620033 KCNQ1DNQ9H478 68 aa2.85□□□□□ -1.95
CHL1-216ENST00000620033 WFDC2Q14508 124 aa2.85□□□□□ -1.95
CHL1-216ENST00000620033 FAM218AQ96MZ4 157 aa2.85□□□□□ -1.95
CHL1-216ENST00000620033 PLXNB1O43157 2135 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms