RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 SND1-IT1Q9HBX3 110 aa14.43□□□□□ -0.1
SGMS1-210ENST00000619438 CARD19Q96LW7 228 aa14.42□□□□□ -0.1
SGMS1-210ENST00000619438 C6orf223Q8N319 242 aa14.42□□□□□ -0.1
SGMS1-210ENST00000619438 H3BT86 120 aa14.41□□□□□ -0.1
SGMS1-210ENST00000619438 CRPP02741 224 aa14.4□□□□□ -0.1
SGMS1-210ENST00000619438 IGKV2-28A0A075B6P5 120 aa14.39□□□□□ -0.11
SGMS1-210ENST00000619438 IGKV2D-28P01615 120 aa14.39□□□□□ -0.11
SGMS1-210ENST00000619438 COX17Q14061 63 aa14.39□□□□□ -0.11
SGMS1-210ENST00000619438 CLEC2BQ92478 149 aa14.39□□□□□ -0.11
SGMS1-210ENST00000619438 CKS1BP61024 79 aa14.39□□□□□ -0.11
SGMS1-210ENST00000619438 MALP21145 153 aa14.38□□□□□ -0.11
SGMS1-210ENST00000619438 PFN2P35080 140 aa14.38□□□□□ -0.11
SGMS1-210ENST00000619438 RPL28P46779 137 aaKnown RBP14.38□□□□□ -0.11
SGMS1-210ENST00000619438 CFAP161Q6P656 301 aa14.38□□□□□ -0.11
SGMS1-210ENST00000619438 FAT2Q9NYQ8 4349 aa14.37□□□□□ -0.11
SGMS1-210ENST00000619438 GAGE12HA6NDE8 117 aa14.37□□□□□ -0.11
SGMS1-210ENST00000619438 LINC00337Q8N6G1 96 aa14.37□□□□□ -0.11
SGMS1-210ENST00000619438 IGLV10-54A0A075B6I4 117 aa14.36□□□□□ -0.11
SGMS1-210ENST00000619438 KRTAP1-5Q9BYS1 174 aa14.36□□□□□ -0.11
SGMS1-210ENST00000619438 C2orf82Q6UX34 121 aa14.36□□□□□ -0.11
SGMS1-210ENST00000619438 DNAH17Q9UFH2 4485 aa14.36□□□□□ -0.11
SGMS1-210ENST00000619438 WFDC10BQ8IUB3 73 aa14.35□□□□□ -0.11
SGMS1-210ENST00000619438 TRAV8-4A0A0B4J246 113 aa14.34□□□□□ -0.11
SGMS1-210ENST00000619438 PCP4P48539 62 aa14.34□□□□□ -0.11
SGMS1-210ENST00000619438 ENHOQ6UWT2 76 aa14.34□□□□□ -0.11
SGMS1-210ENST00000619438 KLK12Q9UKR0 248 aa14.34□□□□□ -0.11
SGMS1-210ENST00000619438 TRACP01848 142 aa14.33□□□□□ -0.11
SGMS1-210ENST00000619438 NTN5Q8WTR8 489 aaPredicted RBP14.32□□□□□ -0.12
SGMS1-210ENST00000619438 PKD1P98161 4303 aa14.31□□□□□ -0.12
SGMS1-210ENST00000619438 TNP2Q05952 138 aa14.3□□□□□ -0.12
SGMS1-210ENST00000619438 NDUFC2O95298 119 aa14.3□□□□□ -0.12
SGMS1-210ENST00000619438 SIGMAR1Q99720 223 aa14.3□□□□□ -0.12
SGMS1-210ENST00000619438 A0A1B0GVY2 172 aa14.29□□□□□ -0.12
SGMS1-210ENST00000619438 DNAH10OSP0CZ25 163 aa14.29□□□□□ -0.12
SGMS1-210ENST00000619438 SPAG11BQ08648 103 aa14.28□□□□□ -0.12
SGMS1-210ENST00000619438 SMIM11BQ8TCY0 68 aa14.28□□□□□ -0.12
SGMS1-210ENST00000619438 UBE2WQ96B02 151 aa14.28□□□□□ -0.12
SGMS1-210ENST00000619438 PKHD1P08F94 4074 aa14.28□□□□□ -0.12
SGMS1-210ENST00000619438 H0YGX0 51 aa14.26□□□□□ -0.13
SGMS1-210ENST00000619438 CDIP1Q9H305 208 aa14.26□□□□□ -0.13
SGMS1-210ENST00000619438 GVQW2A0A096LPI5 108 aaPredicted RBP14.26□□□□□ -0.13
SGMS1-210ENST00000619438 LINC01556Q5JQF7 62 aa14.24□□□□□ -0.13
SGMS1-210ENST00000619438 TEX49A0A1B0GTD5 131 aa14.23□□□□□ -0.13
SGMS1-210ENST00000619438 FAM218AQ96MZ4 157 aa14.23□□□□□ -0.13
SGMS1-210ENST00000619438 KRTAP26-1Q6PEX3 210 aa14.22□□□□□ -0.13
SGMS1-210ENST00000619438 SCGB1A1P11684 91 aa14.21□□□□□ -0.13
SGMS1-210ENST00000619438 UNQ6190/PRO20217Q6UXQ8 127 aa14.21□□□□□ -0.13
SGMS1-210ENST00000619438 C9orf116Q5BN46 136 aaPredicted RBP14.2□□□□□ -0.14
SGMS1-210ENST00000619438 C10orf25Q5T742 122 aa14.2□□□□□ -0.14
SGMS1-210ENST00000619438 OR13C6PQ8NH95 151 aa14.2□□□□□ -0.14
SGMS1-210ENST00000619438 Q6ZRN7 208 aaPredicted RBP14.18□□□□□ -0.14
SGMS1-210ENST00000619438 Q9HAA7 133 aa14.17□□□□□ -0.14
SGMS1-210ENST00000619438 TMEM126AQ9H061 195 aa14.17□□□□□ -0.14
SGMS1-210ENST00000619438 PSCAO43653 123 aa14.16□□□□□ -0.14
SGMS1-210ENST00000619438 BAALC-AS2P0C853 105 aa14.16□□□□□ -0.14
SGMS1-210ENST00000619438 FAM240AA0A1B0GVK7 77 aa14.14□□□□□ -0.15
SGMS1-210ENST00000619438 A0A087WYN8 130 aa14.13□□□□□ -0.15
SGMS1-210ENST00000619438 C16orf90A8MZG2 172 aa14.13□□□□□ -0.15
SGMS1-210ENST00000619438 C22orf24Q9Y442 160 aa14.13□□□□□ -0.15
SGMS1-210ENST00000619438 KIAA1109Q2LD37 5005 aa14.12□□□□□ -0.15
SGMS1-210ENST00000619438 A0A1B0GX51 115 aa14.12□□□□□ -0.15
SGMS1-210ENST00000619438 F8WDY8 70 aa14.12□□□□□ -0.15
SGMS1-210ENST00000619438 LINC00526Q96FQ7 95 aa14.12□□□□□ -0.15
SGMS1-210ENST00000619438 C6orf48Q9UBA6 75 aa14.12□□□□□ -0.15
SGMS1-210ENST00000619438 DNAL4O96015 105 aa14.11□□□□□ -0.15
SGMS1-210ENST00000619438 PRR3P79522 188 aaKnown RBP14.11□□□□□ -0.15
SGMS1-210ENST00000619438 C2orf48Q96LS8 159 aa14.11□□□□□ -0.15
SGMS1-210ENST00000619438 XGP55808 180 aa14.1□□□□□ -0.15
SGMS1-210ENST00000619438 C21orf62-AS1Q17RA5 79 aa14.1□□□□□ -0.15
SGMS1-210ENST00000619438 C1orf43Q9BWL3 253 aa14.1□□□□□ -0.15
SGMS1-210ENST00000619438 DNAH11Q96DT5 4516 aa14.1□□□□□ -0.15
SGMS1-210ENST00000619438 ZNF561-AS1K7EIQ3 104 aa14.1□□□□□ -0.15
SGMS1-210ENST00000619438 Q8NDZ9 215 aa14.1□□□□□ -0.15
SGMS1-210ENST00000619438 C15orf56Q8N910 161 aa14.09□□□□□ -0.15
SGMS1-210ENST00000619438 A0A087WTM6 91 aa14.07□□□□□ -0.16
SGMS1-210ENST00000619438 LINC00167Q96N53 147 aa14.07□□□□□ -0.16
SGMS1-210ENST00000619438 KRTAP10-2P60368 255 aa14.07□□□□□ -0.16
SGMS1-210ENST00000619438 CAMK2N2Q96S95 79 aa14.07□□□□□ -0.16
SGMS1-210ENST00000619438 HERC2O95714 4834 aa14.06□□□□□ -0.16
SGMS1-210ENST00000619438 LECT2O14960 151 aa14.06□□□□□ -0.16
SGMS1-210ENST00000619438 MT-ATP8P03928 68 aa14.06□□□□□ -0.16
SGMS1-210ENST00000619438 DYNC1H1Q14204 4646 aaKnown RBP14.06□□□□□ -0.16
SGMS1-210ENST00000619438 NCR3O14931 201 aa14.05□□□□□ -0.16
SGMS1-210ENST00000619438 ACYP1P07311 99 aa14.05□□□□□ -0.16
SGMS1-210ENST00000619438 INAFM2P0DMQ5 153 aa14.04□□□□□ -0.16
SGMS1-210ENST00000619438 IGLV6-57P01721 117 aa14.04□□□□□ -0.16
SGMS1-210ENST00000619438 HIGD2BQ4VC39 106 aa14.04□□□□□ -0.16
SGMS1-210ENST00000619438 S100A7L2Q5SY68 101 aa14.04□□□□□ -0.16
SGMS1-210ENST00000619438 RMI2Q96E14 147 aa14.04□□□□□ -0.16
SGMS1-210ENST00000619438 IGKV2D-24A0A075B6R9 120 aa14.01□□□□□ -0.17
SGMS1-210ENST00000619438 FUSP35637 526 aaKnown RBP eCLIP14.01□□□□□ -0.172e-7■■□□□ 14.1
SGMS1-210ENST00000619438 OBSCN-AS1Q96MR7 158 aa14.01□□□□□ -0.17
SGMS1-210ENST00000619438 Q6ZRU5 148 aa14.01□□□□□ -0.17
SGMS1-210ENST00000619438 Q8N814 137 aa14□□□□□ -0.17
SGMS1-210ENST00000619438 ORMDL1Q9P0S3 153 aa14□□□□□ -0.17
SGMS1-210ENST00000619438 LRCOL1A6NCL2 159 aa13.99□□□□□ -0.17
SGMS1-210ENST00000619438 NDUFC2-KCTD14E9PQ53 114 aa13.99□□□□□ -0.17
SGMS1-210ENST00000619438 C6orf99Q4VX62 202 aa13.99□□□□□ -0.17
SGMS1-210ENST00000619438 SNCGO76070 127 aa13.98□□□□□ -0.17
SGMS1-210ENST00000619438 RPL18AQ02543 176 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms