RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 PLAC4Q8WY50 150 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 BCORQ6W2J9 1755 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 DOT1LQ8TEK3 1739 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 TOGARAM1Q9Y4F4 1720 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 SLIT1O75093 1534 aa1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 PCDH15Q96QU1 1955 aa1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 A0A1B0GU69 56 aa1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 SPINK7P58062 85 aa1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 UNQ6190/PRO20217Q6UXQ8 127 aa1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 NMES1Q9C002 83 aa1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 A0A0G2JMZ2 1700 aa1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 LRRC37A2A6NM11 1700 aa1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 LRRC37AA6NMS7 1700 aa1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 LMO7Q8WWI1 1683 aa1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 MDC1Q14676 2089 aaKnown RBP1.25□□□□□ -2.21
HMGB1P24-202ENST00000615653 ZNF236Q9UL36 1845 aa1.24□□□□□ -2.21
HMGB1P24-202ENST00000615653 MYO7AQ13402 2215 aa1.24□□□□□ -2.21
HMGB1P24-202ENST00000615653 HAMPP81172 84 aa1.24□□□□□ -2.21
HMGB1P24-202ENST00000615653 LINC00575Q6W349 94 aa1.24□□□□□ -2.21
HMGB1P24-202ENST00000615653 Q6ZRX8 168 aa1.24□□□□□ -2.21
HMGB1P24-202ENST00000615653 ZCCHC13Q8WW36 166 aaKnown RBP1.24□□□□□ -2.21
HMGB1P24-202ENST00000615653 OBSCN-AS1Q96MR7 158 aa1.24□□□□□ -2.21
HMGB1P24-202ENST00000615653 LINC00472Q9H8W2 130 aa1.24□□□□□ -2.21
HMGB1P24-202ENST00000615653 LRP6O75581 1613 aa1.24□□□□□ -2.21
HMGB1P24-202ENST00000615653 MYO7BQ6PIF6 2116 aa1.24□□□□□ -2.21
HMGB1P24-202ENST00000615653 RTTNQ86VV8 2226 aa1.23□□□□□ -2.21
HMGB1P24-202ENST00000615653 ERCC6L2Q5T890 1561 aa1.23□□□□□ -2.21
HMGB1P24-202ENST00000615653 ENHOQ6UWT2 76 aa1.23□□□□□ -2.21
HMGB1P24-202ENST00000615653 CMC2Q9NRP2 79 aa1.23□□□□□ -2.21
HMGB1P24-202ENST00000615653 PRRC2BQ5JSZ5 2229 aaKnown RBP1.23□□□□□ -2.21
HMGB1P24-202ENST00000615653 DEPDC5O75140 1603 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 NHSL1Q5SYE7 1610 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 PAPPA2Q9BXP8 1791 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 LCE6AA0A183 80 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 FXYD6P3P58550 94 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 RICTORQ6R327 1708 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 TIAM2Q8IVF5 1701 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 TET1Q8NFU7 2136 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 COL4A1P02462 1669 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 UBR3Q6ZT12 1888 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 ABCA4P78363 2273 aa1.22□□□□□ -2.21
HMGB1P24-202ENST00000615653 FREM1Q5H8C1 2179 aa1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 A0A096LNT2 108 aa1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 GVQW2A0A096LPI5 108 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 K7EMI3 77 aa1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 NDUFA4O00483 81 aa1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 COX7BP24311 80 aa1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 NCBP2-AS2Q69YL0 99 aa1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 BRD3OSQ6XYD6 125 aa1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 SSBP3-AS1Q7Z2R9 100 aa1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 DOCK10Q96BY6 2186 aa1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 FBN3Q75N90 2809 aa1.21□□□□□ -2.22
HMGB1P24-202ENST00000615653 GOLGA4Q13439 2230 aaKnown RBP1.2□□□□□ -2.22
HMGB1P24-202ENST00000615653 SHANK1Q9Y566 2161 aa1.2□□□□□ -2.22
HMGB1P24-202ENST00000615653 PLXNB2O15031 1838 aa1.2□□□□□ -2.22
HMGB1P24-202ENST00000615653 NRXN3Q9Y4C0 1643 aa1.2□□□□□ -2.22
HMGB1P24-202ENST00000615653 MRPL33O75394 65 aaKnown RBP1.2□□□□□ -2.22
HMGB1P24-202ENST00000615653 PLNP26678 52 aa1.2□□□□□ -2.22
HMGB1P24-202ENST00000615653 KRTAP13-1Q8IUC0 172 aa1.2□□□□□ -2.22
HMGB1P24-202ENST00000615653 ABRACLQ9P1F3 81 aa1.2□□□□□ -2.22
HMGB1P24-202ENST00000615653 FN1P02751 2386 aaKnown RBP1.2□□□□□ -2.22
HMGB1P24-202ENST00000615653 SNRPGP62308 76 aaKnown RBP1.19□□□□□ -2.22
HMGB1P24-202ENST00000615653 UBE2DNLQ8IWF7 75 aa1.19□□□□□ -2.22
HMGB1P24-202ENST00000615653 DUOX1Q9NRD9 1551 aa1.19□□□□□ -2.22
HMGB1P24-202ENST00000615653 DNAJC13O75165 2243 aa1.18□□□□□ -2.22
HMGB1P24-202ENST00000615653 SPTY2D1-AS1A0A0U1RR47 76 aa1.18□□□□□ -2.22
HMGB1P24-202ENST00000615653 LINC00959A0A1B0GUT2 108 aa1.18□□□□□ -2.22
HMGB1P24-202ENST00000615653 G3V318 75 aa1.18□□□□□ -2.22
HMGB1P24-202ENST00000615653 DEFB103AP81534 67 aa1.18□□□□□ -2.22
HMGB1P24-202ENST00000615653 DEFB114Q30KQ6 69 aa1.18□□□□□ -2.22
HMGB1P24-202ENST00000615653 KRTAP13-4Q3LI77 160 aa1.18□□□□□ -2.22
HMGB1P24-202ENST00000615653 FBN1P35555 2871 aaKnown RBP1.17□□□□□ -2.22
HMGB1P24-202ENST00000615653 CPSF4LA6NMK7 179 aaKnown RBP1.17□□□□□ -2.22
HMGB1P24-202ENST00000615653 LY6G6CO95867 125 aa1.17□□□□□ -2.22
HMGB1P24-202ENST00000615653 KRTAP12-4P60329 112 aa1.17□□□□□ -2.22
HMGB1P24-202ENST00000615653 RPL37P61927 97 aaKnown RBP1.17□□□□□ -2.22
HMGB1P24-202ENST00000615653 CRIPTQ9P021 101 aa1.17□□□□□ -2.22
HMGB1P24-202ENST00000615653 SDK1Q7Z5N4 2213 aa1.17□□□□□ -2.22
HMGB1P24-202ENST00000615653 KMT2BQ9UMN6 2715 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P24-202ENST00000615653 ETDCA0A1B0GVM5 59 aa1.16□□□□□ -2.22
HMGB1P24-202ENST00000615653 ARL14EPLP0DKL9 152 aa1.16□□□□□ -2.22
HMGB1P24-202ENST00000615653 DEFB119Q8N690 84 aa1.16□□□□□ -2.22
HMGB1P24-202ENST00000615653 USMG5Q96IX5 58 aa1.16□□□□□ -2.22
HMGB1P24-202ENST00000615653 KCNQ1DNQ9H478 68 aa1.16□□□□□ -2.22
HMGB1P24-202ENST00000615653 SMIM27A0A1W2PRY6 76 aa1.15□□□□□ -2.23
HMGB1P24-202ENST00000615653 H0YGX0 51 aa1.15□□□□□ -2.23
HMGB1P24-202ENST00000615653 M0R1W7 72 aa1.15□□□□□ -2.23
HMGB1P24-202ENST00000615653 KRTAP12-3P60328 96 aa1.15□□□□□ -2.23
HMGB1P24-202ENST00000615653 I3L3M4 83 aa1.14□□□□□ -2.23
HMGB1P24-202ENST00000615653 ANGP03950 147 aaKnown RBP1.14□□□□□ -2.23
HMGB1P24-202ENST00000615653 PIGYQ3MUY2 71 aa1.14□□□□□ -2.23
HMGB1P24-202ENST00000615653 RPS27LQ71UM5 84 aaKnown RBP1.14□□□□□ -2.23
HMGB1P24-202ENST00000615653 INTS1Q8N201 2190 aaKnown RBP1.14□□□□□ -2.23
HMGB1P24-202ENST00000615653 ZNF831Q5JPB2 1677 aa1.13□□□□□ -2.23
HMGB1P24-202ENST00000615653 SSC5DA1L4H1 1573 aa1.13□□□□□ -2.23
HMGB1P24-202ENST00000615653 ICE1Q9Y2F5 2266 aa1.13□□□□□ -2.23
HMGB1P24-202ENST00000615653 DEFB131BA0A096LNP1 70 aa1.13□□□□□ -2.23
HMGB1P24-202ENST00000615653 ZFHX3Q15911 3703 aa1.13□□□□□ -2.23
HMGB1P24-202ENST00000615653 IGIPA6NJ69 53 aa1.12□□□□□ -2.23
HMGB1P24-202ENST00000615653 PCOTHQ58A44 107 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms