RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PLAC8L1A1L4L8 177 aa9.06□□□□□ -0.96
TCF3-220ENST00000611869 C3orf84H3BNL1 204 aa9.06□□□□□ -0.96
TCF3-220ENST00000611869 SMIM20Q8N5G0 67 aa9.06□□□□□ -0.96
TCF3-220ENST00000611869 FAM240AA0A1B0GVK7 77 aa9.05□□□□□ -0.96
TCF3-220ENST00000611869 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
TCF3-220ENST00000611869 NDUFC2O95298 119 aa9.05□□□□□ -0.96
TCF3-220ENST00000611869 Q6ZRU5 148 aa9.05□□□□□ -0.96
TCF3-220ENST00000611869 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
TCF3-220ENST00000611869 BPY2O14599 106 aa9.05□□□□□ -0.96
TCF3-220ENST00000611869 ESRGQ1W209 222 aa9.05□□□□□ -0.96
TCF3-220ENST00000611869 C10orf25Q5T742 122 aa9.05□□□□□ -0.96
TCF3-220ENST00000611869 LINC01561Q8N1V8 128 aa9.05□□□□□ -0.96
TCF3-220ENST00000611869 DMDP11532 3685 aa9.04□□□□□ -0.96
TCF3-220ENST00000611869 NBEAL2Q6ZNJ1 2754 aa9.04□□□□□ -0.96
TCF3-220ENST00000611869 NDUFC2-KCTD14E9PQ53 114 aa9.04□□□□□ -0.96
TCF3-220ENST00000611869 IL17DQ8TAD2 202 aa9.04□□□□□ -0.96
TCF3-220ENST00000611869 WFDC9Q8NEX5 89 aa9.03□□□□□ -0.96
TCF3-220ENST00000611869 FAM218AQ96MZ4 157 aa9.03□□□□□ -0.96
TCF3-220ENST00000611869 ZANQ9Y493 2812 aa9.03□□□□□ -0.96
TCF3-220ENST00000611869 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
TCF3-220ENST00000611869 NOTCH1P46531 2555 aa9.02□□□□□ -0.97
TCF3-220ENST00000611869 LOC107984640A0A0U1RRK4 108 aa9.02□□□□□ -0.97
TCF3-220ENST00000611869 IMUPQ9GZP8 106 aa9.01□□□□□ -0.97
TCF3-220ENST00000611869 ASPMQ8IZT6 3477 aa9.01□□□□□ -0.97
TCF3-220ENST00000611869 COL6A5A8TX70 2615 aa9□□□□□ -0.97
TCF3-220ENST00000611869 C20orf197Q8N268 126 aa9□□□□□ -0.97
TCF3-220ENST00000611869 UTP20O75691 2785 aaKnown RBP9□□□□□ -0.97
TCF3-220ENST00000611869 M0QXV9 152 aa9□□□□□ -0.97
TCF3-220ENST00000611869 PPDPFQ9H3Y8 114 aa9□□□□□ -0.97
TCF3-220ENST00000611869 STAB1Q9NY15 2570 aa9□□□□□ -0.97
TCF3-220ENST00000611869 ATP5EP2Q5VTU8 51 aa9□□□□□ -0.97
TCF3-220ENST00000611869 CCDC179H3BU77 68 aa9□□□□□ -0.97
TCF3-220ENST00000611869 UQCRQO14949 82 aa9□□□□□ -0.97
TCF3-220ENST00000611869 B9D2Q9BPU9 175 aa8.99□□□□□ -0.97
TCF3-220ENST00000611869 A0A087WVE0 104 aa8.99□□□□□ -0.97
TCF3-220ENST00000611869 ITPR2Q14571 2701 aa8.99□□□□□ -0.97
TCF3-220ENST00000611869 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
TCF3-220ENST00000611869 C2orf48Q96LS8 159 aa8.98□□□□□ -0.97
TCF3-220ENST00000611869 C6orf48Q9UBA6 75 aa8.98□□□□□ -0.97
TCF3-220ENST00000611869 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
TCF3-220ENST00000611869 DHRS4-AS1Q9P1J3 65 aa8.98□□□□□ -0.97
TCF3-220ENST00000611869 DCHS1Q96JQ0 3298 aa8.97□□□□□ -0.97
TCF3-220ENST00000611869 LAMA5O15230 3695 aa8.97□□□□□ -0.97
TCF3-220ENST00000611869 NDUFS5O43920 106 aa8.97□□□□□ -0.97
TCF3-220ENST00000611869 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.97
TCF3-220ENST00000611869 LINC01556Q5JQF7 62 aa8.96□□□□□ -0.97
TCF3-220ENST00000611869 LINC00846Q9NV44 126 aa8.96□□□□□ -0.97
TCF3-220ENST00000611869 Q6Q795 121 aa8.96□□□□□ -0.98
TCF3-220ENST00000611869 Q6JHZ5 121 aa8.95□□□□□ -0.98
TCF3-220ENST00000611869 C3orf22Q8N5N4 141 aa8.95□□□□□ -0.98
TCF3-220ENST00000611869 HRNRQ86YZ3 2850 aaPredicted RBP8.95□□□□□ -0.98
TCF3-220ENST00000611869 RELNP78509 3460 aa8.94□□□□□ -0.98
TCF3-220ENST00000611869 NDUFB1O75438 58 aa8.94□□□□□ -0.98
TCF3-220ENST00000611869 H0Y9J4 135 aa8.94□□□□□ -0.98
TCF3-220ENST00000611869 FAM19A3Q7Z5A8 133 aa8.93□□□□□ -0.98
TCF3-220ENST00000611869 H3BNG1 76 aa8.92□□□□□ -0.98
TCF3-220ENST00000611869 SERP2Q8N6R1 65 aa8.91□□□□□ -0.98
TCF3-220ENST00000611869 KRTAP10-11P60412 298 aa8.91□□□□□ -0.98
TCF3-220ENST00000611869 LINC00612Q8N6U2 182 aa8.91□□□□□ -0.98
TCF3-220ENST00000611869 CRYBG3Q68DQ2 2970 aa8.89□□□□□ -0.99
TCF3-220ENST00000611869 LY6G6CO95867 125 aa8.89□□□□□ -0.99
TCF3-220ENST00000611869 COX7CP15954 63 aa8.89□□□□□ -0.99
TCF3-220ENST00000611869 MRPL55Q7Z7F7 128 aaKnown RBP8.89□□□□□ -0.99
TCF3-220ENST00000611869 MP68P56378 58 aa8.89□□□□□ -0.99
TCF3-220ENST00000611869 FAM104AQ969W3 186 aa8.88□□□□□ -0.99
TCF3-220ENST00000611869 REG3GQ6UW15 175 aa8.88□□□□□ -0.99
TCF3-220ENST00000611869 NUPR2A6NF83 97 aa8.88□□□□□ -0.99
TCF3-220ENST00000611869 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
TCF3-220ENST00000611869 C7orf33Q8WU49 177 aa8.88□□□□□ -0.99
TCF3-220ENST00000611869 LRCOL1A6NCL2 159 aa8.87□□□□□ -0.99
TCF3-220ENST00000611869 J3KT08 172 aa8.87□□□□□ -0.99
TCF3-220ENST00000611869 ASH1LQ9NR48 2969 aaKnown RBP8.87□□□□□ -0.99
TCF3-220ENST00000611869 ZFHX4Q86UP3 3567 aa8.87□□□□□ -0.99
TCF3-220ENST00000611869 LINC00588Q9Y4M8 146 aa8.87□□□□□ -0.99
TCF3-220ENST00000611869 F8WDY8 70 aa8.86□□□□□ -0.99
TCF3-220ENST00000611869 KIAA0087Q14695 138 aa8.86□□□□□ -0.99
TCF3-220ENST00000611869 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
TCF3-220ENST00000611869 SNURFQ9Y675 71 aa8.86□□□□□ -0.99
TCF3-220ENST00000611869 APCP25054 2843 aa8.85□□□□□ -0.99
TCF3-220ENST00000611869 PRLHP81277 87 aa8.85□□□□□ -0.99
TCF3-220ENST00000611869 Q6ZVQ6 151 aa8.84□□□□□ -0.99
TCF3-220ENST00000611869 WFDC13Q8IUB5 93 aa8.84□□□□□ -0.99
TCF3-220ENST00000611869 DCHS2Q6V1P9 2916 aa8.83□□□□□ -1
TCF3-220ENST00000611869 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
TCF3-220ENST00000611869 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
TCF3-220ENST00000611869 HRCT1Q6UXD1 115 aa8.83□□□□□ -1
TCF3-220ENST00000611869 NBEAL1Q6ZS30 2694 aa8.83□□□□□ -1
TCF3-220ENST00000611869 LINC00167Q96N53 147 aa8.83□□□□□ -1
TCF3-220ENST00000611869 PRYO14603 147 aa8.82□□□□□ -1
TCF3-220ENST00000611869 PRR34Q9NV39 138 aa8.82□□□□□ -1
TCF3-220ENST00000611869 LINC00474Q9P2X8 69 aa8.82□□□□□ -1
TCF3-220ENST00000611869 Q6ZRP5 223 aa8.81□□□□□ -1
TCF3-220ENST00000611869 NF1P21359 2839 aa8.81□□□□□ -1
TCF3-220ENST00000611869 TMEM258P61165 79 aa8.8□□□□□ -1
TCF3-220ENST00000611869 GVQW2A0A096LPI5 108 aaPredicted RBP8.79□□□□□ -1
TCF3-220ENST00000611869 FAM236DA0A1B0GTK5 79 aa8.79□□□□□ -1
TCF3-220ENST00000611869 FAM236CP0DP71 79 aa8.79□□□□□ -1
TCF3-220ENST00000611869 LINC01547P58512 204 aaPredicted RBP8.79□□□□□ -1
TCF3-220ENST00000611869 ELOF1P60002 83 aaKnown RBP8.79□□□□□ -1
TCF3-220ENST00000611869 K7EIL1 84 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms