RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 ZNF292O60281 2723 aa8.54□□□□□ -1.04
CDH1-212ENST00000611625 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
CDH1-212ENST00000611625 CENPEQ02224 2701 aa8.53□□□□□ -1.04
CDH1-212ENST00000611625 CXCL6P80162 114 aa8.53□□□□□ -1.04
CDH1-212ENST00000611625 SPATA3Q8NHX4 192 aa8.52□□□□□ -1.05
CDH1-212ENST00000611625 IL17DQ8TAD2 202 aa8.52□□□□□ -1.05
CDH1-212ENST00000611625 REG3GQ6UW15 175 aa8.52□□□□□ -1.05
CDH1-212ENST00000611625 SMCR5Q8TEV8 140 aa8.52□□□□□ -1.05
CDH1-212ENST00000611625 PRYO14603 147 aa8.51□□□□□ -1.05
CDH1-212ENST00000611625 PLAC8L1A1L4L8 177 aa8.5□□□□□ -1.05
CDH1-212ENST00000611625 TMEM254Q8TBM7 123 aa8.5□□□□□ -1.05
CDH1-212ENST00000611625 CSNK1G2-AS1Q8NCQ2 148 aa8.5□□□□□ -1.05
CDH1-212ENST00000611625 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
CDH1-212ENST00000611625 Q6ZQT0 140 aa8.48□□□□□ -1.05
CDH1-212ENST00000611625 Q8N9L7 120 aa8.48□□□□□ -1.05
CDH1-212ENST00000611625 LAMA1P25391 3075 aa8.47□□□□□ -1.05
CDH1-212ENST00000611625 NHLRC4P0CG21 123 aaPredicted RBP8.47□□□□□ -1.05
CDH1-212ENST00000611625 ESRGQ1W209 222 aa8.47□□□□□ -1.05
CDH1-212ENST00000611625 LINC01556Q5JQF7 62 aa8.47□□□□□ -1.05
CDH1-212ENST00000611625 C7orf33Q8WU49 177 aa8.47□□□□□ -1.05
CDH1-212ENST00000611625 GIG44P09565 113 aaPredicted RBP8.47□□□□□ -1.05
CDH1-212ENST00000611625 Q8NAQ8 132 aa8.47□□□□□ -1.05
CDH1-212ENST00000611625 C1orf195Q5TG92 126 aa8.46□□□□□ -1.05
CDH1-212ENST00000611625 ELOF1P60002 83 aaKnown RBP8.46□□□□□ -1.06
CDH1-212ENST00000611625 LOC110117498A0A087WWA1 95 aa8.46□□□□□ -1.06
CDH1-212ENST00000611625 FLNAP21333 2647 aaKnown RBP8.45□□□□□ -1.06
CDH1-212ENST00000611625 TRBV7-6A0A0J9YX20 115 aa8.45□□□□□ -1.06
CDH1-212ENST00000611625 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
CDH1-212ENST00000611625 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
CDH1-212ENST00000611625 A0A087WSZ3 146 aa8.45□□□□□ -1.06
CDH1-212ENST00000611625 BCE1O60756 84 aa8.45□□□□□ -1.06
CDH1-212ENST00000611625 LINC00474Q9P2X8 69 aa8.45□□□□□ -1.06
CDH1-212ENST00000611625 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
CDH1-212ENST00000611625 M0R2N4 97 aa8.45□□□□□ -1.06
CDH1-212ENST00000611625 LINC00208Q96KT6 92 aa8.44□□□□□ -1.06
CDH1-212ENST00000611625 C22orf24Q9Y442 160 aa8.44□□□□□ -1.06
CDH1-212ENST00000611625 C19orf73Q9NVV2 129 aa8.44□□□□□ -1.06
CDH1-212ENST00000611625 ZNF706Q9Y5V0 76 aaPredicted RBP8.44□□□□□ -1.06
CDH1-212ENST00000611625 DSPP15924 2871 aaKnown RBP8.44□□□□□ -1.06
CDH1-212ENST00000611625 H3BNG1 76 aa8.43□□□□□ -1.06
CDH1-212ENST00000611625 SZT2Q5T011 3432 aa8.43□□□□□ -1.06
CDH1-212ENST00000611625 HECTD1Q9ULT8 2610 aa8.43□□□□□ -1.06
CDH1-212ENST00000611625 F8P00451 2351 aa8.42□□□□□ -1.06
CDH1-212ENST00000611625 SPINK6Q6UWN8 80 aa8.42□□□□□ -1.06
CDH1-212ENST00000611625 Q9BRP9 147 aa8.42□□□□□ -1.06
CDH1-212ENST00000611625 DNAH14Q0VDD8 3507 aa8.42□□□□□ -1.06
CDH1-212ENST00000611625 GVQW2A0A096LPI5 108 aaPredicted RBP8.42□□□□□ -1.06
CDH1-212ENST00000611625 LRCOL1A6NCL2 159 aa8.42□□□□□ -1.06
CDH1-212ENST00000611625 RPS28P62857 69 aaKnown RBP8.41□□□□□ -1.06
CDH1-212ENST00000611625 IGLV6-57P01721 117 aa8.41□□□□□ -1.06
CDH1-212ENST00000611625 PRLHP81277 87 aa8.41□□□□□ -1.06
CDH1-212ENST00000611625 VCANP13611 3396 aa8.41□□□□□ -1.06
CDH1-212ENST00000611625 DEFB116Q30KQ4 102 aa8.4□□□□□ -1.06
CDH1-212ENST00000611625 LINC00167Q96N53 147 aa8.4□□□□□ -1.06
CDH1-212ENST00000611625 CASC2Q6XLA1 102 aa8.39□□□□□ -1.07
CDH1-212ENST00000611625 HCG22E2RYF7 251 aa8.38□□□□□ -1.07
CDH1-212ENST00000611625 AKAP13Q12802 2813 aa8.38□□□□□ -1.07
CDH1-212ENST00000611625 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
CDH1-212ENST00000611625 VPREB1P12018 145 aa8.38□□□□□ -1.07
CDH1-212ENST00000611625 ITPR3Q14573 2671 aa8.38□□□□□ -1.07
CDH1-212ENST00000611625 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
CDH1-212ENST00000611625 LINC00612Q8N6U2 182 aa8.37□□□□□ -1.07
CDH1-212ENST00000611625 FRYQ5TBA9 3013 aa8.37□□□□□ -1.07
CDH1-212ENST00000611625 FAM104AQ969W3 186 aa8.37□□□□□ -1.07
CDH1-212ENST00000611625 CELSR3Q9NYQ7 3312 aa8.37□□□□□ -1.07
CDH1-212ENST00000611625 USP24Q9UPU5 2620 aa8.36□□□□□ -1.07
CDH1-212ENST00000611625 NBEAQ8NFP9 2946 aa8.36□□□□□ -1.07
CDH1-212ENST00000611625 Q6ZRX8 168 aa8.35□□□□□ -1.07
CDH1-212ENST00000611625 LINC01600Q96MT4 127 aa8.35□□□□□ -1.07
CDH1-212ENST00000611625 A0A1B0GW54 56 aa8.34□□□□□ -1.07
CDH1-212ENST00000611625 Q8NBF4 154 aa8.34□□□□□ -1.07
CDH1-212ENST00000611625 Q6ZRP5 223 aa8.34□□□□□ -1.07
CDH1-212ENST00000611625 TM2D3Q9BRN9 247 aa8.34□□□□□ -1.07
CDH1-212ENST00000611625 C9orf129Q5T035 196 aaKnown RBP8.34□□□□□ -1.07
CDH1-212ENST00000611625 PRR34Q9NV39 138 aa8.34□□□□□ -1.07
CDH1-212ENST00000611625 MAP1AP78559 2803 aaPredicted RBP8.33□□□□□ -1.08
CDH1-212ENST00000611625 A6NED7 52 aa8.33□□□□□ -1.08
CDH1-212ENST00000611625 NUPR2A6NF83 97 aa8.33□□□□□ -1.08
CDH1-212ENST00000611625 H0Y9P7 68 aa8.33□□□□□ -1.08
CDH1-212ENST00000611625 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
CDH1-212ENST00000611625 ST20-AS1Q8NBB2 130 aa8.3□□□□□ -1.08
CDH1-212ENST00000611625 ATRQ13535 2644 aa8.3□□□□□ -1.08
CDH1-212ENST00000611625 IGHV6-1A0A0B4J1U7 121 aa8.3□□□□□ -1.08
CDH1-212ENST00000611625 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
CDH1-212ENST00000611625 CFAP46Q8IYW2 2715 aa8.29□□□□□ -1.08
CDH1-212ENST00000611625 C4orf26Q17RF5 130 aa8.29□□□□□ -1.08
CDH1-212ENST00000611625 PMAIP1Q13794 54 aa8.29□□□□□ -1.08
CDH1-212ENST00000611625 LINC00476Q8WZB0 136 aa8.29□□□□□ -1.08
CDH1-212ENST00000611625 PSPHP1O15172 72 aa8.28□□□□□ -1.08
CDH1-212ENST00000611625 KRTAP10-3P60369 221 aa8.28□□□□□ -1.08
CDH1-212ENST00000611625 LINC00588Q9Y4M8 146 aa8.28□□□□□ -1.08
CDH1-212ENST00000611625 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
CDH1-212ENST00000611625 hDV103S1A0JD37 113 aa8.28□□□□□ -1.08
CDH1-212ENST00000611625 SEC61GP60059 68 aa8.27□□□□□ -1.09
CDH1-212ENST00000611625 KRTAP24-1Q3LI83 254 aa8.27□□□□□ -1.09
CDH1-212ENST00000611625 DNAH10OSP0CZ25 163 aa8.27□□□□□ -1.09
CDH1-212ENST00000611625 PRR15LQ9BU68 103 aa8.27□□□□□ -1.09
CDH1-212ENST00000611625 PRO0628Q9UI54 55 aa8.26□□□□□ -1.09
CDH1-212ENST00000611625 LY6G6CO95867 125 aa8.26□□□□□ -1.09
CDH1-212ENST00000611625 SERTAD4-AS1Q5TG53 156 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms