RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 IGKV2-28A0A075B6P5 120 aa11.54□□□□□ -0.56
TCF3-219ENST00000610756 LINC00587B1AMM8 73 aa11.54□□□□□ -0.56
TCF3-219ENST00000610756 IGKV2D-28P01615 120 aa11.54□□□□□ -0.56
TCF3-219ENST00000610756 PLNP26678 52 aa11.54□□□□□ -0.56
TCF3-219ENST00000610756 KRTAP13-1Q8IUC0 172 aa11.53□□□□□ -0.56
TCF3-219ENST00000610756 Q8NDZ9 215 aa11.53□□□□□ -0.56
TCF3-219ENST00000610756 A0A0U1RRA0 63 aa11.52□□□□□ -0.57
TCF3-219ENST00000610756 SMIM13P0DJ93 91 aa11.52□□□□□ -0.57
TCF3-219ENST00000610756 RPL13AP40429 203 aaKnown RBP11.52□□□□□ -0.57
TCF3-219ENST00000610756 NDUFA12Q9UI09 145 aa11.52□□□□□ -0.57
TCF3-219ENST00000610756 MYMXA0A1B0GTQ4 84 aa11.51□□□□□ -0.57
TCF3-219ENST00000610756 ATP6V1G1O75348 118 aa11.51□□□□□ -0.57
TCF3-219ENST00000610756 DPM2O94777 84 aa11.51□□□□□ -0.57
TCF3-219ENST00000610756 MEIG1Q5JSS6 88 aa11.5□□□□□ -0.57
TCF3-219ENST00000610756 MAP1LC3CQ9BXW4 147 aa11.5□□□□□ -0.57
TCF3-219ENST00000610756 LEPROTO15243 131 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST1H2BKO60814 126 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST1H2BJP06899 126 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST1H2BOP23527 126 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST1H2BBP33778 126 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 UBE2AP49459 152 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST1H2BDP58876 126 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST1H2BCP62807 126 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST1H2BHQ93079 126 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 PLEKHB2Q96CS7 222 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST1H2BNQ99877 126 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 HIST1H2BMQ99879 126 aa11.49□□□□□ -0.57
TCF3-219ENST00000610756 IGKCP01834 107 aa11.48□□□□□ -0.57
TCF3-219ENST00000610756 MIR7-3HGQ8N6C7 128 aa11.48□□□□□ -0.57
TCF3-219ENST00000610756 TMEM126AQ9H061 195 aa11.48□□□□□ -0.57
TCF3-219ENST00000610756 M0R378 163 aa11.47□□□□□ -0.57
TCF3-219ENST00000610756 PMCHL2Q9BQD1 86 aa11.47□□□□□ -0.57
TCF3-219ENST00000610756 LRP2P98164 4655 aa11.47□□□□□ -0.57
TCF3-219ENST00000610756 TMEM238C9JI98 176 aa11.46□□□□□ -0.57
TCF3-219ENST00000610756 TSPEAR-AS2P59090 65 aa11.46□□□□□ -0.57
TCF3-219ENST00000610756 HERVK_113P61574 105 aa11.46□□□□□ -0.57
TCF3-219ENST00000610756 J3QQQ9 107 aa11.45□□□□□ -0.58
TCF3-219ENST00000610756 BOD1L2Q8IYS8 172 aa11.45□□□□□ -0.58
TCF3-219ENST00000610756 CRYGAP11844 174 aa11.43□□□□□ -0.58
TCF3-219ENST00000610756 NMUP48645 174 aa11.43□□□□□ -0.58
TCF3-219ENST00000610756 FAM19A1Q7Z5A9 133 aa11.43□□□□□ -0.58
TCF3-219ENST00000610756 A0A087X002 238 aa11.42□□□□□ -0.58
TCF3-219ENST00000610756 IGKV2D-26A0A0A0MRZ7 120 aa11.42□□□□□ -0.58
TCF3-219ENST00000610756 LOC107984156A0A0G2JMH3 177 aa11.42□□□□□ -0.58
TCF3-219ENST00000610756 PRLHP81277 87 aa11.42□□□□□ -0.58
TCF3-219ENST00000610756 ARL17AQ8IVW1 177 aa11.42□□□□□ -0.58
TCF3-219ENST00000610756 SYS1-DBNDD2H3BUS1 97 aa11.41□□□□□ -0.58
TCF3-219ENST00000610756 LGALS3P17931 250 aaKnown RBP11.4□□□□□ -0.58
TCF3-219ENST00000610756 ANAPC11Q9NYG5 84 aa11.39□□□□□ -0.59
TCF3-219ENST00000610756 E9PLD3 99 aa11.38□□□□□ -0.59
TCF3-219ENST00000610756 FAM229BQ4G0N7 80 aa11.38□□□□□ -0.59
TCF3-219ENST00000610756 COA6Q5JTJ3 125 aaKnown RBP11.37□□□□□ -0.59
TCF3-219ENST00000610756 TYMSOSQ8TAI1 123 aa11.37□□□□□ -0.59
TCF3-219ENST00000610756 KCNQ1DNQ9H478 68 aa11.37□□□□□ -0.59
TCF3-219ENST00000610756 LINC01545Q5VT33 79 aa11.36□□□□□ -0.59
TCF3-219ENST00000610756 PET117Q6UWS5 81 aa11.36□□□□□ -0.59
TCF3-219ENST00000610756 DAND5Q8N907 189 aa11.36□□□□□ -0.59
TCF3-219ENST00000610756 PRYO14603 147 aa11.35□□□□□ -0.59
TCF3-219ENST00000610756 NCR3O14931 201 aa11.35□□□□□ -0.59
TCF3-219ENST00000610756 SPRR1AP35321 89 aa11.35□□□□□ -0.59
TCF3-219ENST00000610756 LINC00337Q8N6G1 96 aa11.35□□□□□ -0.59
TCF3-219ENST00000610756 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
TCF3-219ENST00000610756 KRTAP13-2Q52LG2 175 aa11.34□□□□□ -0.59
TCF3-219ENST00000610756 A0A0J9YXY3 114 aa11.33□□□□□ -0.6
TCF3-219ENST00000610756 TRBV10-3A0A0K0K1G6 114 aa11.33□□□□□ -0.6
TCF3-219ENST00000610756 HIGD2AQ9BW72 106 aa11.33□□□□□ -0.6
TCF3-219ENST00000610756 KRTAP4-16G5E9R7 235 aaPredicted RBP11.32□□□□□ -0.6
TCF3-219ENST00000610756 NDUFC2O95298 119 aa11.32□□□□□ -0.6
TCF3-219ENST00000610756 MIEN1Q9BRT3 115 aa11.32□□□□□ -0.6
TCF3-219ENST00000610756 C3orf79P0CE67 100 aa11.31□□□□□ -0.6
TCF3-219ENST00000610756 S100A12P80511 92 aa11.31□□□□□ -0.6
TCF3-219ENST00000610756 ADAMTSL4-AS1Q5T5F5 129 aa11.31□□□□□ -0.6
TCF3-219ENST00000610756 TSPAN13O95857 204 aa11.29□□□□□ -0.6
TCF3-219ENST00000610756 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
TCF3-219ENST00000610756 RNF213Q63HN8 5207 aa11.28□□□□□ -0.6
TCF3-219ENST00000610756 LPAP08519 4548 aa11.28□□□□□ -0.6
TCF3-219ENST00000610756 ETDCA0A1B0GVM5 59 aa11.28□□□□□ -0.6
TCF3-219ENST00000610756 DDTP30046 118 aa11.28□□□□□ -0.6
TCF3-219ENST00000610756 SOSTDC1Q6X4U4 206 aa11.27□□□□□ -0.61
TCF3-219ENST00000610756 SPRR4Q96PI1 79 aa11.27□□□□□ -0.61
TCF3-219ENST00000610756 EIF4EBP3O60516 100 aaPredicted RBP11.26□□□□□ -0.61
TCF3-219ENST00000610756 IGLV6-57P01721 117 aa11.26□□□□□ -0.61
TCF3-219ENST00000610756 TIMM17BO60830 172 aa11.25□□□□□ -0.61
TCF3-219ENST00000610756 KRTDAPP60985 99 aa11.25□□□□□ -0.61
TCF3-219ENST00000610756 PRR4Q16378 134 aa11.25□□□□□ -0.61
TCF3-219ENST00000610756 SMCR5Q8TEV8 140 aa11.25□□□□□ -0.61
TCF3-219ENST00000610756 LITAFQ99732 161 aa11.25□□□□□ -0.61
TCF3-219ENST00000610756 ZNF706Q9Y5V0 76 aaPredicted RBP11.25□□□□□ -0.61
TCF3-219ENST00000610756 B5MCH6 92 aa11.24□□□□□ -0.61
TCF3-219ENST00000610756 S100A7L2Q5SY68 101 aa11.24□□□□□ -0.61
TCF3-219ENST00000610756 NPC2P61916 151 aa11.23□□□□□ -0.61
TCF3-219ENST00000610756 CTAG1AP78358 180 aa11.23□□□□□ -0.61
TCF3-219ENST00000610756 LINC00304Q8N9R0 145 aa11.23□□□□□ -0.61
TCF3-219ENST00000610756 ZNF815PA8K554 130 aa11.21□□□□□ -0.61
TCF3-219ENST00000610756 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.61
TCF3-219ENST00000610756 C20orf202A1L168 122 aa11.2□□□□□ -0.62
TCF3-219ENST00000610756 S100A1P23297 94 aa11.2□□□□□ -0.62
TCF3-219ENST00000610756 C3orf22Q8N5N4 141 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms