RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 HIST1H2BNQ99877 126 aa11.72□□□□□ -0.53
SRSF4-206ENST00000605204 HIST1H2BMQ99879 126 aa11.72□□□□□ -0.53
SRSF4-206ENST00000605204 H0Y9J4 135 aa11.71□□□□□ -0.53
SRSF4-206ENST00000605204 DPM2O94777 84 aa11.71□□□□□ -0.53
SRSF4-206ENST00000605204 HERVK_113P61574 105 aa11.7□□□□□ -0.54
SRSF4-206ENST00000605204 RNF213Q63HN8 5207 aa11.7□□□□□ -0.54
SRSF4-206ENST00000605204 MYMXA0A1B0GTQ4 84 aa11.68□□□□□ -0.54
SRSF4-206ENST00000605204 LINC00158P58513 81 aa11.68□□□□□ -0.54
SRSF4-206ENST00000605204 PLEKHB2Q96CS7 222 aa11.68□□□□□ -0.54
SRSF4-206ENST00000605204 LINC00167Q96N53 147 aa11.68□□□□□ -0.54
SRSF4-206ENST00000605204 ZNF861PO60384 105 aa11.67□□□□□ -0.54
SRSF4-206ENST00000605204 BCE1O60756 84 aa11.67□□□□□ -0.54
SRSF4-206ENST00000605204 IGKCP01834 107 aa11.67□□□□□ -0.54
SRSF4-206ENST00000605204 NDUFA12Q9UI09 145 aa11.67□□□□□ -0.54
SRSF4-206ENST00000605204 ATP6V1G1O75348 118 aa11.67□□□□□ -0.54
SRSF4-206ENST00000605204 LEPROTO15243 131 aa11.66□□□□□ -0.54
SRSF4-206ENST00000605204 VPREB1P12018 145 aa11.66□□□□□ -0.54
SRSF4-206ENST00000605204 RPL28P46779 137 aaKnown RBP11.66□□□□□ -0.54
SRSF4-206ENST00000605204 KRTAP10-8P60410 259 aa11.66□□□□□ -0.54
SRSF4-206ENST00000605204 MEIG1Q5JSS6 88 aa11.66□□□□□ -0.54
SRSF4-206ENST00000605204 NMUP48645 174 aa11.65□□□□□ -0.55
SRSF4-206ENST00000605204 COA6Q5JTJ3 125 aaKnown RBP11.65□□□□□ -0.55
SRSF4-206ENST00000605204 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
SRSF4-206ENST00000605204 RPL37AP8A6NKH3 93 aa11.64□□□□□ -0.55
SRSF4-206ENST00000605204 SYS1-DBNDD2H3BUS1 97 aa11.62□□□□□ -0.55
SRSF4-206ENST00000605204 J3QQQ9 107 aa11.62□□□□□ -0.55
SRSF4-206ENST00000605204 SMIM13P0DJ93 91 aa11.62□□□□□ -0.55
SRSF4-206ENST00000605204 IGLV1-50A0A075B6I6 118 aa11.61□□□□□ -0.55
SRSF4-206ENST00000605204 PMCHL2Q9BQD1 86 aa11.61□□□□□ -0.55
SRSF4-206ENST00000605204 LGALS3P17931 250 aaKnown RBP11.6□□□□□ -0.55
SRSF4-206ENST00000605204 S100A1P23297 94 aa11.6□□□□□ -0.55
SRSF4-206ENST00000605204 PET117Q6UWS5 81 aa11.6□□□□□ -0.55
SRSF4-206ENST00000605204 TSPEAR-AS2P59090 65 aa11.59□□□□□ -0.55
SRSF4-206ENST00000605204 MIR7-3HGQ8N6C7 128 aa11.59□□□□□ -0.55
SRSF4-206ENST00000605204 IGKV2-28A0A075B6P5 120 aa11.58□□□□□ -0.56
SRSF4-206ENST00000605204 A0A0U1RRA0 63 aa11.58□□□□□ -0.56
SRSF4-206ENST00000605204 E9PLD3 99 aa11.58□□□□□ -0.56
SRSF4-206ENST00000605204 IGKV2D-28P01615 120 aa11.58□□□□□ -0.56
SRSF4-206ENST00000605204 RPL13AP40429 203 aaKnown RBP11.58□□□□□ -0.56
SRSF4-206ENST00000605204 IGKV2D-26A0A0A0MRZ7 120 aa11.57□□□□□ -0.56
SRSF4-206ENST00000605204 M0R378 163 aa11.57□□□□□ -0.56
SRSF4-206ENST00000605204 UBE2AP49459 152 aa11.57□□□□□ -0.56
SRSF4-206ENST00000605204 LINC01545Q5VT33 79 aa11.57□□□□□ -0.56
SRSF4-206ENST00000605204 KRTAP1-4P0C5Y4 121 aa11.56□□□□□ -0.56
SRSF4-206ENST00000605204 BOD1L2Q8IYS8 172 aa11.56□□□□□ -0.56
SRSF4-206ENST00000605204 TMEM126AQ9H061 195 aa11.55□□□□□ -0.56
SRSF4-206ENST00000605204 KRTAP13-1Q8IUC0 172 aa11.54□□□□□ -0.56
SRSF4-206ENST00000605204 Q8NDZ9 215 aa11.54□□□□□ -0.56
SRSF4-206ENST00000605204 LOC107984156A0A0G2JMH3 177 aa11.54□□□□□ -0.56
SRSF4-206ENST00000605204 AKR1D1P51857 326 aa11.54□□□□□ -0.56
SRSF4-206ENST00000605204 ARL17AQ8IVW1 177 aa11.54□□□□□ -0.56
SRSF4-206ENST00000605204 MIEN1Q9BRT3 115 aa11.54□□□□□ -0.56
SRSF4-206ENST00000605204 C20orf202A1L168 122 aa11.53□□□□□ -0.56
SRSF4-206ENST00000605204 PRR26Q8N8Z3 221 aa11.53□□□□□ -0.56
SRSF4-206ENST00000605204 S100A12P80511 92 aa11.52□□□□□ -0.57
SRSF4-206ENST00000605204 C3orf79P0CE67 100 aa11.51□□□□□ -0.57
SRSF4-206ENST00000605204 FAM19A1Q7Z5A9 133 aa11.5□□□□□ -0.57
SRSF4-206ENST00000605204 TRBV10-2A0A0K0K1G8 114 aa11.49□□□□□ -0.57
SRSF4-206ENST00000605204 TMEM238C9JI98 176 aa11.49□□□□□ -0.57
SRSF4-206ENST00000605204 PRYO14603 147 aa11.49□□□□□ -0.57
SRSF4-206ENST00000605204 KRTDAPP60985 99 aa11.49□□□□□ -0.57
SRSF4-206ENST00000605204 A0A0J9YXY3 114 aa11.47□□□□□ -0.57
SRSF4-206ENST00000605204 NDUFC2O95298 119 aa11.47□□□□□ -0.57
SRSF4-206ENST00000605204 SPANXB1Q9NS25 103 aaPredicted RBP11.47□□□□□ -0.57
SRSF4-206ENST00000605204 NCR3O14931 201 aa11.46□□□□□ -0.57
SRSF4-206ENST00000605204 PRLHP81277 87 aa11.46□□□□□ -0.57
SRSF4-206ENST00000605204 DAND5Q8N907 189 aa11.46□□□□□ -0.57
SRSF4-206ENST00000605204 KCNQ1DNQ9H478 68 aa11.46□□□□□ -0.57
SRSF4-206ENST00000605204 TIMM17BO60830 172 aa11.45□□□□□ -0.58
SRSF4-206ENST00000605204 CRYGAP11844 174 aa11.45□□□□□ -0.58
SRSF4-206ENST00000605204 LINC00337Q8N6G1 96 aa11.45□□□□□ -0.58
SRSF4-206ENST00000605204 FAM229BQ4G0N7 80 aa11.44□□□□□ -0.58
SRSF4-206ENST00000605204 SPRR1AP35321 89 aa11.43□□□□□ -0.58
SRSF4-206ENST00000605204 TRBV10-3A0A0K0K1G6 114 aa11.41□□□□□ -0.58
SRSF4-206ENST00000605204 ZNF815PA8K554 130 aa11.41□□□□□ -0.58
SRSF4-206ENST00000605204 S100A2P29034 98 aa11.41□□□□□ -0.58
SRSF4-206ENST00000605204 CBY1Q9Y3M2 126 aa11.41□□□□□ -0.58
SRSF4-206ENST00000605204 ETDCA0A1B0GVM5 59 aa11.4□□□□□ -0.59
SRSF4-206ENST00000605204 DDTP30046 118 aa11.4□□□□□ -0.59
SRSF4-206ENST00000605204 ZNF706Q9Y5V0 76 aaPredicted RBP11.4□□□□□ -0.59
SRSF4-206ENST00000605204 SNRPEP62304 92 aaKnown RBP11.39□□□□□ -0.59
SRSF4-206ENST00000605204 S100A7L2Q5SY68 101 aa11.39□□□□□ -0.59
SRSF4-206ENST00000605204 ADAMTSL4-AS1Q5T5F5 129 aa11.39□□□□□ -0.59
SRSF4-206ENST00000605204 HIGD2AQ9BW72 106 aa11.39□□□□□ -0.59
SRSF4-206ENST00000605204 LPAP08519 4548 aa11.39□□□□□ -0.59
SRSF4-206ENST00000605204 A0A087X002 238 aa11.38□□□□□ -0.59
SRSF4-206ENST00000605204 S100A6P06703 90 aa11.38□□□□□ -0.59
SRSF4-206ENST00000605204 TYMSOSQ8TAI1 123 aa11.38□□□□□ -0.59
SRSF4-206ENST00000605204 HIST3H2BBQ8N257 126 aa11.37□□□□□ -0.59
SRSF4-206ENST00000605204 LITAFQ99732 161 aa11.37□□□□□ -0.59
SRSF4-206ENST00000605204 SPANXCQ9NY87 97 aa11.37□□□□□ -0.59
SRSF4-206ENST00000605204 KRTAP4-16G5E9R7 235 aaPredicted RBP11.36□□□□□ -0.59
SRSF4-206ENST00000605204 IGLV6-57P01721 117 aa11.36□□□□□ -0.59
SRSF4-206ENST00000605204 SOSTDC1Q6X4U4 206 aa11.36□□□□□ -0.59
SRSF4-206ENST00000605204 COPS9Q8WXC6 57 aa11.36□□□□□ -0.59
SRSF4-206ENST00000605204 LINC00308Q8TCZ7 52 aa11.35□□□□□ -0.59
SRSF4-206ENST00000605204 HIST1H2BLQ99880 126 aa11.35□□□□□ -0.59
SRSF4-206ENST00000605204 SCGB1D4Q6XE38 83 aa11.34□□□□□ -0.59
SRSF4-206ENST00000605204 NPC2P61916 151 aa11.33□□□□□ -0.6
SRSF4-206ENST00000605204 TRAV23DV6A0A075B6W5 121 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 302.2 ms