RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 PLNP26678 52 aa13.16□□□□□ -0.3
PPFIA3-208ENST00000602726 IGLV1-50A0A075B6I6 118 aa13.15□□□□□ -0.3
PPFIA3-208ENST00000602726 ATP6V1G1O75348 118 aa13.15□□□□□ -0.3
PPFIA3-208ENST00000602726 HERV-K104P63124 156 aa13.14□□□□□ -0.31
PPFIA3-208ENST00000602726 MEIG1Q5JSS6 88 aa13.14□□□□□ -0.31
PPFIA3-208ENST00000602726 DPM2O94777 84 aa13.13□□□□□ -0.31
PPFIA3-208ENST00000602726 SMIM13P0DJ93 91 aa13.13□□□□□ -0.31
PPFIA3-208ENST00000602726 NDUFA12Q9UI09 145 aa13.13□□□□□ -0.31
PPFIA3-208ENST00000602726 UBE2AP49459 152 aa13.12□□□□□ -0.31
PPFIA3-208ENST00000602726 UBR4Q5T4S7 5183 aa13.12□□□□□ -0.31
PPFIA3-208ENST00000602726 MYMXA0A1B0GTQ4 84 aa13.11□□□□□ -0.31
PPFIA3-208ENST00000602726 LINC00587B1AMM8 73 aa13.11□□□□□ -0.31
PPFIA3-208ENST00000602726 Q8NDZ9 215 aa13.11□□□□□ -0.31
PPFIA3-208ENST00000602726 PMCHL2Q9BQD1 86 aa13.11□□□□□ -0.31
PPFIA3-208ENST00000602726 MAP1LC3CQ9BXW4 147 aa13.11□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST1H2BKO60814 126 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST1H2BJP06899 126 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST1H2BOP23527 126 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST1H2BBP33778 126 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST1H2BDP58876 126 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST1H2BCP62807 126 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST2H2BEQ16778 126 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST1H2BHQ93079 126 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 PLEKHB2Q96CS7 222 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST1H2BNQ99877 126 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 HIST1H2BMQ99879 126 aa13.1□□□□□ -0.31
PPFIA3-208ENST00000602726 LEPROTO15243 131 aa13.09□□□□□ -0.31
PPFIA3-208ENST00000602726 IGKCP01834 107 aa13.09□□□□□ -0.31
PPFIA3-208ENST00000602726 RPL13AP40429 203 aaKnown RBP13.09□□□□□ -0.31
PPFIA3-208ENST00000602726 HERVK_113P61574 105 aa13.09□□□□□ -0.31
PPFIA3-208ENST00000602726 TSPEAR-AS2P59090 65 aa13.07□□□□□ -0.32
PPFIA3-208ENST00000602726 MIR7-3HGQ8N6C7 128 aa13.07□□□□□ -0.32
PPFIA3-208ENST00000602726 TMEM238C9JI98 176 aa13.06□□□□□ -0.32
PPFIA3-208ENST00000602726 KRTAP13-1Q8IUC0 172 aa13.06□□□□□ -0.32
PPFIA3-208ENST00000602726 TMEM126AQ9H061 195 aa13.06□□□□□ -0.32
PPFIA3-208ENST00000602726 J3QQQ9 107 aa13.05□□□□□ -0.32
PPFIA3-208ENST00000602726 M0R378 163 aa13.05□□□□□ -0.32
PPFIA3-208ENST00000602726 BOD1L2Q8IYS8 172 aa13.05□□□□□ -0.32
PPFIA3-208ENST00000602726 FAM19A1Q7Z5A9 133 aa13.04□□□□□ -0.32
PPFIA3-208ENST00000602726 LGALS3P17931 250 aaKnown RBP13.03□□□□□ -0.32
PPFIA3-208ENST00000602726 NMUP48645 174 aa13.02□□□□□ -0.33
PPFIA3-208ENST00000602726 PRLHP81277 87 aa13.02□□□□□ -0.33
PPFIA3-208ENST00000602726 LRP2P98164 4655 aa13.01□□□□□ -0.33
PPFIA3-208ENST00000602726 SYS1-DBNDD2H3BUS1 97 aa13.01□□□□□ -0.33
PPFIA3-208ENST00000602726 NCR3O14931 201 aa12.99□□□□□ -0.33
PPFIA3-208ENST00000602726 CRYGAP11844 174 aa12.99□□□□□ -0.33
PPFIA3-208ENST00000602726 DAND5Q8N907 189 aa12.98□□□□□ -0.33
PPFIA3-208ENST00000602726 A0A087X002 238 aa12.97□□□□□ -0.33
PPFIA3-208ENST00000602726 IGKV2D-26A0A0A0MRZ7 120 aa12.97□□□□□ -0.33
PPFIA3-208ENST00000602726 ANAPC11Q9NYG5 84 aa12.97□□□□□ -0.33
PPFIA3-208ENST00000602726 E9PLD3 99 aa12.95□□□□□ -0.34
PPFIA3-208ENST00000602726 PET117Q6UWS5 81 aa12.95□□□□□ -0.34
PPFIA3-208ENST00000602726 PRYO14603 147 aa12.94□□□□□ -0.34
PPFIA3-208ENST00000602726 TYMSOSQ8TAI1 123 aa12.94□□□□□ -0.34
PPFIA3-208ENST00000602726 MIEN1Q9BRT3 115 aa12.94□□□□□ -0.34
PPFIA3-208ENST00000602726 LOC107984156A0A0G2JMH3 177 aa12.93□□□□□ -0.34
PPFIA3-208ENST00000602726 LINC01545Q5VT33 79 aa12.93□□□□□ -0.34
PPFIA3-208ENST00000602726 ARL17AQ8IVW1 177 aa12.93□□□□□ -0.34
PPFIA3-208ENST00000602726 FAM229BQ4G0N7 80 aa12.92□□□□□ -0.34
PPFIA3-208ENST00000602726 COA6Q5JTJ3 125 aaKnown RBP12.92□□□□□ -0.34
PPFIA3-208ENST00000602726 HIGD2AQ9BW72 106 aa12.92□□□□□ -0.34
PPFIA3-208ENST00000602726 KCNQ1DNQ9H478 68 aa12.91□□□□□ -0.34
PPFIA3-208ENST00000602726 A0A0J9YXY3 114 aa12.9□□□□□ -0.34
PPFIA3-208ENST00000602726 TRBV10-3A0A0K0K1G6 114 aa12.9□□□□□ -0.34
PPFIA3-208ENST00000602726 S100A12P80511 92 aa12.9□□□□□ -0.34
PPFIA3-208ENST00000602726 C3orf79P0CE67 100 aa12.89□□□□□ -0.35
PPFIA3-208ENST00000602726 KRTDAPP60985 99 aa12.88□□□□□ -0.35
PPFIA3-208ENST00000602726 LINC00337Q8N6G1 96 aa12.88□□□□□ -0.35
PPFIA3-208ENST00000602726 TRBV10-2A0A0K0K1G8 114 aa12.87□□□□□ -0.35
PPFIA3-208ENST00000602726 ETDCA0A1B0GVM5 59 aa12.87□□□□□ -0.35
PPFIA3-208ENST00000602726 SPRR1AP35321 89 aa12.87□□□□□ -0.35
PPFIA3-208ENST00000602726 KRTAP13-2Q52LG2 175 aa12.87□□□□□ -0.35
PPFIA3-208ENST00000602726 TSPAN13O95857 204 aa12.86□□□□□ -0.35
PPFIA3-208ENST00000602726 DDTP30046 118 aa12.86□□□□□ -0.35
PPFIA3-208ENST00000602726 ADAMTSL4-AS1Q5T5F5 129 aa12.86□□□□□ -0.35
PPFIA3-208ENST00000602726 SPANXB1Q9NS25 103 aaPredicted RBP12.86□□□□□ -0.35
PPFIA3-208ENST00000602726 NDUFC2O95298 119 aa12.85□□□□□ -0.35
PPFIA3-208ENST00000602726 NPC2P61916 151 aa12.85□□□□□ -0.35
PPFIA3-208ENST00000602726 KRTAP4-16G5E9R7 235 aaPredicted RBP12.83□□□□□ -0.36
PPFIA3-208ENST00000602726 C20orf202A1L168 122 aa12.82□□□□□ -0.36
PPFIA3-208ENST00000602726 PRR4Q16378 134 aa12.82□□□□□ -0.36
PPFIA3-208ENST00000602726 S100A7L2Q5SY68 101 aa12.82□□□□□ -0.36
PPFIA3-208ENST00000602726 SOSTDC1Q6X4U4 206 aa12.82□□□□□ -0.36
PPFIA3-208ENST00000602726 ZNF706Q9Y5V0 76 aaPredicted RBP12.82□□□□□ -0.36
PPFIA3-208ENST00000602726 ZNF815PA8K554 130 aa12.81□□□□□ -0.36
PPFIA3-208ENST00000602726 SPRR4Q96PI1 79 aa12.81□□□□□ -0.36
PPFIA3-208ENST00000602726 EIF4EBP3O60516 100 aaPredicted RBP12.8□□□□□ -0.36
PPFIA3-208ENST00000602726 SMCR5Q8TEV8 140 aa12.8□□□□□ -0.36
PPFIA3-208ENST00000602726 TIMM17BO60830 172 aa12.79□□□□□ -0.36
PPFIA3-208ENST00000602726 S100A1P23297 94 aa12.79□□□□□ -0.36
PPFIA3-208ENST00000602726 LPAP08519 4548 aa12.78□□□□□ -0.36
PPFIA3-208ENST00000602726 B5MCH6 92 aa12.78□□□□□ -0.36
PPFIA3-208ENST00000602726 IGLV6-57P01721 117 aa12.78□□□□□ -0.36
PPFIA3-208ENST00000602726 LINC00304Q8N9R0 145 aa12.78□□□□□ -0.36
PPFIA3-208ENST00000602726 LITAFQ99732 161 aa12.78□□□□□ -0.36
PPFIA3-208ENST00000602726 LINC00308Q8TCZ7 52 aa12.77□□□□□ -0.37
PPFIA3-208ENST00000602726 TTTY13Q9BZ97 58 aa12.77□□□□□ -0.37
PPFIA3-208ENST00000602726 RNF213Q63HN8 5207 aa12.76□□□□□ -0.37
PPFIA3-208ENST00000602726 TRAV23DV6A0A075B6W5 121 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms