RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 PKD1L1Q8TDX9 2849 aa13.19□□□□□ -0.3
GRAMD1A-207ENST00000598118 WFDC10BQ8IUB3 73 aa13.18□□□□□ -0.3
GRAMD1A-207ENST00000598118 FAM236AA0A1B0GUQ0 79 aa13.17□□□□□ -0.3
GRAMD1A-207ENST00000598118 FAM236BA0A1B0GV22 79 aa13.17□□□□□ -0.3
GRAMD1A-207ENST00000598118 B5MCH6 92 aa13.17□□□□□ -0.3
GRAMD1A-207ENST00000598118 CMYA5Q8N3K9 4069 aa13.17□□□□□ -0.3
GRAMD1A-207ENST00000598118 A0A1B0GX51 115 aa13.16□□□□□ -0.3
GRAMD1A-207ENST00000598118 S100A7L2Q5SY68 101 aa13.16□□□□□ -0.3
GRAMD1A-207ENST00000598118 KPRPQ5T749 579 aaPredicted RBP13.16□□□□□ -0.3
GRAMD1A-207ENST00000598118 LINC00846Q9NV44 126 aa13.16□□□□□ -0.3
GRAMD1A-207ENST00000598118 Q6ZTC4 211 aa13.15□□□□□ -0.3
GRAMD1A-207ENST00000598118 C6orf48Q9UBA6 75 aa13.15□□□□□ -0.3
GRAMD1A-207ENST00000598118 TENM3Q9P273 2699 aa13.14□□□□□ -0.31
GRAMD1A-207ENST00000598118 RPL18AQ02543 176 aaKnown RBP13.13□□□□□ -0.31
GRAMD1A-207ENST00000598118 GVQW2A0A096LPI5 108 aaPredicted RBP13.13□□□□□ -0.31
GRAMD1A-207ENST00000598118 MUC7Q8TAX7 377 aa13.12□□□□□ -0.31
GRAMD1A-207ENST00000598118 IGLV6-57P01721 117 aa13.11□□□□□ -0.31
GRAMD1A-207ENST00000598118 LINC00575Q6W349 94 aa13.11□□□□□ -0.31
GRAMD1A-207ENST00000598118 XAGE1AQ9HD64 81 aa13.11□□□□□ -0.31
GRAMD1A-207ENST00000598118 TMEM256-PLSCR3K7ERE1 68 aa13.1□□□□□ -0.31
GRAMD1A-207ENST00000598118 KRTAP26-1Q6PEX3 210 aa13.1□□□□□ -0.31
GRAMD1A-207ENST00000598118 H3BNG1 76 aa13.1□□□□□ -0.31
GRAMD1A-207ENST00000598118 HIGD2BQ4VC39 106 aa13.09□□□□□ -0.31
GRAMD1A-207ENST00000598118 SS18L2Q9UHA2 77 aa13.09□□□□□ -0.31
GRAMD1A-207ENST00000598118 STAB1Q9NY15 2570 aa13.09□□□□□ -0.31
GRAMD1A-207ENST00000598118 CCKP06307 115 aa13.08□□□□□ -0.32
GRAMD1A-207ENST00000598118 ESRGQ1W209 222 aa13.08□□□□□ -0.32
GRAMD1A-207ENST00000598118 JMJD7-PLA2G4BH0Y9G9 81 aa13.07□□□□□ -0.32
GRAMD1A-207ENST00000598118 IGKV3D-7A0A0C4DH55 119 aa13.06□□□□□ -0.32
GRAMD1A-207ENST00000598118 TRBV10-3A0A0K0K1G6 114 aa13.06□□□□□ -0.32
GRAMD1A-207ENST00000598118 EGFEM1PQ0D2K5 195 aa13.06□□□□□ -0.32
GRAMD1A-207ENST00000598118 KRTAP24-1Q3LI83 254 aa13.06□□□□□ -0.32
GRAMD1A-207ENST00000598118 FLNBO75369 2602 aaKnown RBP13.06□□□□□ -0.32
GRAMD1A-207ENST00000598118 hADV29S1A0JD25 119 aa13.05□□□□□ -0.32
GRAMD1A-207ENST00000598118 FBN1P35555 2871 aaKnown RBP13.04□□□□□ -0.32
GRAMD1A-207ENST00000598118 ZNF561-AS1K7EIQ3 104 aa13.04□□□□□ -0.32
GRAMD1A-207ENST00000598118 CAMK2N2Q96S95 79 aa13.04□□□□□ -0.32
GRAMD1A-207ENST00000598118 Q6JHZ5 121 aa13.03□□□□□ -0.32
GRAMD1A-207ENST00000598118 C15orf56Q8N910 161 aa13.03□□□□□ -0.32
GRAMD1A-207ENST00000598118 Q6ZRU5 148 aa13.02□□□□□ -0.33
GRAMD1A-207ENST00000598118 DNAH3Q8TD57 4116 aa13.01□□□□□ -0.33
GRAMD1A-207ENST00000598118 TRAV23DV6A0A075B6W5 121 aa13□□□□□ -0.33
GRAMD1A-207ENST00000598118 HIST1H4AP62805 103 aaKnown RBP13□□□□□ -0.33
GRAMD1A-207ENST00000598118 DEFB131BA0A096LNP1 70 aa12.98□□□□□ -0.33
GRAMD1A-207ENST00000598118 VPREB1P12018 145 aa12.98□□□□□ -0.33
GRAMD1A-207ENST00000598118 Q6ZQY7 126 aa12.98□□□□□ -0.33
GRAMD1A-207ENST00000598118 A0A087WVE0 104 aa12.97□□□□□ -0.33
GRAMD1A-207ENST00000598118 C3orf56Q8N813 242 aa12.97□□□□□ -0.33
GRAMD1A-207ENST00000598118 DIRC1Q969H9 104 aa12.96□□□□□ -0.33
GRAMD1A-207ENST00000598118 ZNF73O43830 326 aaPredicted RBP12.96□□□□□ -0.34
GRAMD1A-207ENST00000598118 C11orf45Q8TAV5 145 aa12.96□□□□□ -0.34
GRAMD1A-207ENST00000598118 LINC01556Q5JQF7 62 aa12.95□□□□□ -0.34
GRAMD1A-207ENST00000598118 RBM3P98179 157 aaKnown RBP12.95□□□□□ -0.34
GRAMD1A-207ENST00000598118 C1orf43Q9BWL3 253 aa12.95□□□□□ -0.34
GRAMD1A-207ENST00000598118 NOTCH1P46531 2555 aa12.95□□□□□ -0.34
GRAMD1A-207ENST00000598118 Q6ZQT0 140 aa12.94□□□□□ -0.34
GRAMD1A-207ENST00000598118 LAMTOR3Q9UHA4 124 aa12.94□□□□□ -0.34
GRAMD1A-207ENST00000598118 IGKV2D-24A0A075B6R9 120 aa12.93□□□□□ -0.34
GRAMD1A-207ENST00000598118 NDUFC2-KCTD14E9PQ53 114 aa12.93□□□□□ -0.34
GRAMD1A-207ENST00000598118 C2orf48Q96LS8 159 aa12.93□□□□□ -0.34
GRAMD1A-207ENST00000598118 MAST4O15021 2626 aa12.93□□□□□ -0.34
GRAMD1A-207ENST00000598118 M0R2N4 97 aa12.93□□□□□ -0.34
GRAMD1A-207ENST00000598118 Q6ZRP5 223 aa12.92□□□□□ -0.34
GRAMD1A-207ENST00000598118 C3orf22Q8N5N4 141 aa12.92□□□□□ -0.34
GRAMD1A-207ENST00000598118 COX7BP24311 80 aa12.91□□□□□ -0.34
GRAMD1A-207ENST00000598118 ELOF1P60002 83 aaKnown RBP12.91□□□□□ -0.34
GRAMD1A-207ENST00000598118 LOC110117498A0A087WWA1 95 aa12.9□□□□□ -0.35
GRAMD1A-207ENST00000598118 M0R378 163 aa12.9□□□□□ -0.35
GRAMD1A-207ENST00000598118 UQCRQO14949 82 aa12.9□□□□□ -0.35
GRAMD1A-207ENST00000598118 ATOX1O00244 68 aa12.88□□□□□ -0.35
GRAMD1A-207ENST00000598118 COX7CP15954 63 aa12.87□□□□□ -0.35
GRAMD1A-207ENST00000598118 C9orf153Q5TBE3 101 aa12.87□□□□□ -0.35
GRAMD1A-207ENST00000598118 PRB2P02812 416 aaPredicted RBP12.86□□□□□ -0.35
GRAMD1A-207ENST00000598118 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.86□□□□□ -0.35
GRAMD1A-207ENST00000598118 DNAH10OSP0CZ25 163 aa12.86□□□□□ -0.35
GRAMD1A-207ENST00000598118 SYCNQ0VAF6 134 aa12.86□□□□□ -0.35
GRAMD1A-207ENST00000598118 TRBV7-6A0A0J9YX20 115 aa12.85□□□□□ -0.35
GRAMD1A-207ENST00000598118 UBL5Q9BZL1 73 aa12.85□□□□□ -0.35
GRAMD1A-207ENST00000598118 FAM19A1Q7Z5A9 133 aa12.85□□□□□ -0.35
GRAMD1A-207ENST00000598118 DSCR8Q96T75 97 aa12.85□□□□□ -0.35
GRAMD1A-207ENST00000598118 USP17L23D6RBM5 183 aa12.84□□□□□ -0.35
GRAMD1A-207ENST00000598118 ATP5EP2Q5VTU8 51 aa12.83□□□□□ -0.35
GRAMD1A-207ENST00000598118 HUWE1Q7Z6Z7 4374 aaKnown RBP12.83□□□□□ -0.36
GRAMD1A-207ENST00000598118 DNAH1Q9P2D7 4330 aa12.83□□□□□ -0.36
GRAMD1A-207ENST00000598118 LINC00528Q8N1L1 170 aa12.83□□□□□ -0.36
GRAMD1A-207ENST00000598118 LINC00588Q9Y4M8 146 aa12.82□□□□□ -0.36
GRAMD1A-207ENST00000598118 H3BQ85 93 aa12.81□□□□□ -0.36
GRAMD1A-207ENST00000598118 SERTAD4-AS1Q5TG53 156 aa12.81□□□□□ -0.36
GRAMD1A-207ENST00000598118 F8WDY8 70 aa12.8□□□□□ -0.36
GRAMD1A-207ENST00000598118 CASC10Q5T4H9 136 aa12.8□□□□□ -0.36
GRAMD1A-207ENST00000598118 COL6A5A8TX70 2615 aa12.8□□□□□ -0.36
GRAMD1A-207ENST00000598118 NBEAL1Q6ZS30 2694 aa12.79□□□□□ -0.36
GRAMD1A-207ENST00000598118 TRBV7-4A0A0J9YYF1 115 aa12.78□□□□□ -0.36
GRAMD1A-207ENST00000598118 TRAV10A0A0B4J240 114 aa12.77□□□□□ -0.36
GRAMD1A-207ENST00000598118 Q6ZVQ6 151 aa12.77□□□□□ -0.36
GRAMD1A-207ENST00000598118 PDE6GP18545 87 aa12.77□□□□□ -0.37
GRAMD1A-207ENST00000598118 SERP2Q8N6R1 65 aa12.77□□□□□ -0.37
GRAMD1A-207ENST00000598118 CYSTM1Q9H1C7 97 aa12.77□□□□□ -0.37
GRAMD1A-207ENST00000598118 CRYGAP11844 174 aa12.76□□□□□ -0.37
GRAMD1A-207ENST00000598118 C7orf33Q8WU49 177 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms