RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 ZNF625Q96I27 306 aaPredicted RBP11.8□□□□□ -0.52
DNMT1-215ENST00000588913 TMEM243Q9BU79 118 aa11.8□□□□□ -0.52
DNMT1-215ENST00000588913 COX6A2Q02221 97 aa11.79□□□□□ -0.52
DNMT1-215ENST00000588913 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
DNMT1-215ENST00000588913 MEIG1Q5JSS6 88 aa11.79□□□□□ -0.52
DNMT1-215ENST00000588913 TRAV13-2A0A0B4J235 113 aa11.78□□□□□ -0.52
DNMT1-215ENST00000588913 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
DNMT1-215ENST00000588913 CLEC2BQ92478 149 aa11.78□□□□□ -0.52
DNMT1-215ENST00000588913 NDUFV3P56181 108 aaKnown RBP11.77□□□□□ -0.52
DNMT1-215ENST00000588913 NPC2P61916 151 aa11.77□□□□□ -0.52
DNMT1-215ENST00000588913 GAGE6Q13070 117 aa11.77□□□□□ -0.52
DNMT1-215ENST00000588913 LINC00336Q6ZUF6 198 aa11.77□□□□□ -0.52
DNMT1-215ENST00000588913 SVIPQ8NHG7 77 aa11.77□□□□□ -0.52
DNMT1-215ENST00000588913 IMUPQ9GZP8 106 aa11.77□□□□□ -0.53
DNMT1-215ENST00000588913 TRAV13-1A0A0B4J241 112 aa11.75□□□□□ -0.53
DNMT1-215ENST00000588913 LRP1BQ9NZR2 4599 aa11.74□□□□□ -0.53
DNMT1-215ENST00000588913 TRBV6-8A0A0A6YYG3 113 aa11.74□□□□□ -0.53
DNMT1-215ENST00000588913 DAND5Q8N907 189 aa11.73□□□□□ -0.53
DNMT1-215ENST00000588913 TRBV7-7A0A0K0K1E9 115 aa11.72□□□□□ -0.53
DNMT1-215ENST00000588913 INAFM2P0DMQ5 153 aa11.72□□□□□ -0.53
DNMT1-215ENST00000588913 IBA57-AS1B1ANH7 110 aa11.72□□□□□ -0.53
DNMT1-215ENST00000588913 RPL28P46779 137 aaKnown RBP11.71□□□□□ -0.54
DNMT1-215ENST00000588913 COX7B2Q8TF08 81 aa11.71□□□□□ -0.54
DNMT1-215ENST00000588913 CRPP02741 224 aa11.7□□□□□ -0.54
DNMT1-215ENST00000588913 Q9HAA7 133 aa11.7□□□□□ -0.54
DNMT1-215ENST00000588913 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
DNMT1-215ENST00000588913 SOSTDC1Q6X4U4 206 aa11.69□□□□□ -0.54
DNMT1-215ENST00000588913 H0YGX0 51 aa11.68□□□□□ -0.54
DNMT1-215ENST00000588913 KRTAP10-2P60368 255 aa11.67□□□□□ -0.54
DNMT1-215ENST00000588913 LINC00643Q86TS7 51 aa11.67□□□□□ -0.54
DNMT1-215ENST00000588913 KIAA1109Q2LD37 5005 aa11.67□□□□□ -0.54
DNMT1-215ENST00000588913 BAALC-AS2P0C853 105 aa11.67□□□□□ -0.54
DNMT1-215ENST00000588913 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
DNMT1-215ENST00000588913 KLK12Q9UKR0 248 aa11.67□□□□□ -0.54
DNMT1-215ENST00000588913 LINC01561Q8N1V8 128 aa11.65□□□□□ -0.54
DNMT1-215ENST00000588913 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.54
DNMT1-215ENST00000588913 A0A087WZ39 114 aa11.64□□□□□ -0.55
DNMT1-215ENST00000588913 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
DNMT1-215ENST00000588913 A0A0U1RRA0 63 aa11.63□□□□□ -0.55
DNMT1-215ENST00000588913 CXCL5P42830 114 aa11.63□□□□□ -0.55
DNMT1-215ENST00000588913 ENHOQ6UWT2 76 aa11.63□□□□□ -0.55
DNMT1-215ENST00000588913 SDIM1Q6ZPB5 146 aa11.63□□□□□ -0.55
DNMT1-215ENST00000588913 A0A087WTM6 91 aa11.62□□□□□ -0.55
DNMT1-215ENST00000588913 IGHV3OR16-9A0A0B4J2B5 98 aa11.62□□□□□ -0.55
DNMT1-215ENST00000588913 LRCOL1A6NCL2 159 aa11.62□□□□□ -0.55
DNMT1-215ENST00000588913 DNAL4O96015 105 aa11.62□□□□□ -0.55
DNMT1-215ENST00000588913 IGLV4-60A0A075B6I1 120 aa11.62□□□□□ -0.55
DNMT1-215ENST00000588913 MIR7-3HGQ8N6C7 128 aa11.62□□□□□ -0.55
DNMT1-215ENST00000588913 MALP21145 153 aa11.61□□□□□ -0.55
DNMT1-215ENST00000588913 CLPSL2Q6UWE3 100 aa11.61□□□□□ -0.55
DNMT1-215ENST00000588913 HERC2O95714 4834 aa11.6□□□□□ -0.55
DNMT1-215ENST00000588913 LINC00158P58513 81 aa11.6□□□□□ -0.55
DNMT1-215ENST00000588913 A0A1B0GUV1 79 aa11.59□□□□□ -0.55
DNMT1-215ENST00000588913 ANGP03950 147 aaKnown RBP11.59□□□□□ -0.55
DNMT1-215ENST00000588913 HSPG2P98160 4391 aa11.58□□□□□ -0.55
DNMT1-215ENST00000588913 B5MCH6 92 aa11.57□□□□□ -0.56
DNMT1-215ENST00000588913 LECT2O14960 151 aa11.57□□□□□ -0.56
DNMT1-215ENST00000588913 SS18Q15532 418 aa11.57□□□□□ -0.56
DNMT1-215ENST00000588913 LINC00269Q8N2A0 174 aa11.57□□□□□ -0.56
DNMT1-215ENST00000588913 TOMM7Q9P0U1 55 aa11.57□□□□□ -0.56
DNMT1-215ENST00000588913 DNAH8Q96JB1 4490 aa11.57□□□□□ -0.56
DNMT1-215ENST00000588913 RYR1P21817 5038 aa11.57□□□□□ -0.56
DNMT1-215ENST00000588913 A0A1B0GX51 115 aa11.56□□□□□ -0.56
DNMT1-215ENST00000588913 PRR34Q9NV39 138 aa11.56□□□□□ -0.56
DNMT1-215ENST00000588913 IGKV2-28A0A075B6P5 120 aa11.56□□□□□ -0.56
DNMT1-215ENST00000588913 IGKV2D-24A0A075B6R9 120 aa11.56□□□□□ -0.56
DNMT1-215ENST00000588913 IGKV2D-28P01615 120 aa11.56□□□□□ -0.56
DNMT1-215ENST00000588913 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
DNMT1-215ENST00000588913 LINC00337Q8N6G1 96 aa11.56□□□□□ -0.56
DNMT1-215ENST00000588913 PSCAO43653 123 aa11.55□□□□□ -0.56
DNMT1-215ENST00000588913 Q8IZM0 81 aa11.55□□□□□ -0.56
DNMT1-215ENST00000588913 LINC00959A0A1B0GUT2 108 aa11.54□□□□□ -0.56
DNMT1-215ENST00000588913 SMIM11BQ8TCY0 68 aa11.54□□□□□ -0.56
DNMT1-215ENST00000588913 FAM218AQ96MZ4 157 aa11.54□□□□□ -0.56
DNMT1-215ENST00000588913 C16orf90A8MZG2 172 aa11.54□□□□□ -0.56
DNMT1-215ENST00000588913 C6orf226Q5I0X4 101 aa11.54□□□□□ -0.56
DNMT1-215ENST00000588913 TMEM126AQ9H061 195 aa11.54□□□□□ -0.56
DNMT1-215ENST00000588913 COX17Q14061 63 aa11.53□□□□□ -0.56
DNMT1-215ENST00000588913 KRTAP17-1Q9BYP8 105 aa11.53□□□□□ -0.56
DNMT1-215ENST00000588913 IGLV10-54A0A075B6I4 117 aa11.52□□□□□ -0.57
DNMT1-215ENST00000588913 CCDC179H3BU77 68 aa11.52□□□□□ -0.57
DNMT1-215ENST00000588913 OBSCN-AS1Q96MR7 158 aa11.52□□□□□ -0.57
DNMT1-215ENST00000588913 REG3AQ06141 175 aa11.51□□□□□ -0.57
DNMT1-215ENST00000588913 C5orf38Q86SI9 138 aa11.51□□□□□ -0.57
DNMT1-215ENST00000588913 Q8N814 137 aa11.51□□□□□ -0.57
DNMT1-215ENST00000588913 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
DNMT1-215ENST00000588913 SS18L2Q9UHA2 77 aa11.5□□□□□ -0.57
DNMT1-215ENST00000588913 IGKV3OR2-268A0A0C4DH90 116 aa11.49□□□□□ -0.57
DNMT1-215ENST00000588913 NDUFC2O95298 119 aa11.49□□□□□ -0.57
DNMT1-215ENST00000588913 GAGE2AQ6NT46 116 aa11.49□□□□□ -0.57
DNMT1-215ENST00000588913 C1orf43Q9BWL3 253 aa11.49□□□□□ -0.57
DNMT1-215ENST00000588913 FAM236AA0A1B0GUQ0 79 aa11.49□□□□□ -0.57
DNMT1-215ENST00000588913 FAM236BA0A1B0GV22 79 aa11.49□□□□□ -0.57
DNMT1-215ENST00000588913 KRTAP10-1P60331 282 aa11.48□□□□□ -0.57
DNMT1-215ENST00000588913 RMI2Q96E14 147 aa11.47□□□□□ -0.57
DNMT1-215ENST00000588913 ORMDL1Q9P0S3 153 aa11.47□□□□□ -0.57
DNMT1-215ENST00000588913 PFN2P35080 140 aa11.46□□□□□ -0.57
DNMT1-215ENST00000588913 S100A7L2Q5SY68 101 aa11.46□□□□□ -0.57
DNMT1-215ENST00000588913 SMCR5Q8TEV8 140 aa11.46□□□□□ -0.57
DNMT1-215ENST00000588913 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms