RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 ZNF625Q96I27 306 aaPredicted RBP10.18□□□□□ -0.78
CDC42EP4-206ENST00000581014 MAP1LC3CQ9BXW4 147 aa10.18□□□□□ -0.78
CDC42EP4-206ENST00000581014 FABP4P15090 132 aa10.17□□□□□ -0.78
CDC42EP4-206ENST00000581014 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
CDC42EP4-206ENST00000581014 ATP6V1G1O75348 118 aa10.15□□□□□ -0.78
CDC42EP4-206ENST00000581014 DPM2O94777 84 aa10.15□□□□□ -0.78
CDC42EP4-206ENST00000581014 PFN2P35080 140 aa10.15□□□□□ -0.78
CDC42EP4-206ENST00000581014 RPL13AP40429 203 aaKnown RBP10.15□□□□□ -0.78
CDC42EP4-206ENST00000581014 RPL28P46779 137 aaKnown RBP10.15□□□□□ -0.78
CDC42EP4-206ENST00000581014 NKAPP1Q8N9T2 125 aa10.14□□□□□ -0.79
CDC42EP4-206ENST00000581014 SND1-IT1Q9HBX3 110 aa10.14□□□□□ -0.79
CDC42EP4-206ENST00000581014 RPL37AP8A6NKH3 93 aa10.13□□□□□ -0.79
CDC42EP4-206ENST00000581014 HERV-K104P63124 156 aa10.13□□□□□ -0.79
CDC42EP4-206ENST00000581014 GAGE10A6NGK3 116 aa10.12□□□□□ -0.79
CDC42EP4-206ENST00000581014 LINC00587B1AMM8 73 aa10.12□□□□□ -0.79
CDC42EP4-206ENST00000581014 H0Y8G0 127 aa10.12□□□□□ -0.79
CDC42EP4-206ENST00000581014 SYS1-DBNDD2H3BUS1 97 aa10.12□□□□□ -0.79
CDC42EP4-206ENST00000581014 IGKCP01834 107 aa10.12□□□□□ -0.79
CDC42EP4-206ENST00000581014 VPREB1P12018 145 aa10.12□□□□□ -0.79
CDC42EP4-206ENST00000581014 KRTAP13-1Q8IUC0 172 aa10.12□□□□□ -0.79
CDC42EP4-206ENST00000581014 HERVK_113P61574 105 aa10.11□□□□□ -0.79
CDC42EP4-206ENST00000581014 PET117Q6UWS5 81 aa10.11□□□□□ -0.79
CDC42EP4-206ENST00000581014 PLEKHB2Q96CS7 222 aa10.11□□□□□ -0.79
CDC42EP4-206ENST00000581014 RPL24P83731 157 aaKnown RBP10.1□□□□□ -0.79
CDC42EP4-206ENST00000581014 RNF213Q63HN8 5207 aa10.09□□□□□ -0.79
CDC42EP4-206ENST00000581014 LEPROTO15243 131 aa10.09□□□□□ -0.79
CDC42EP4-206ENST00000581014 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
CDC42EP4-206ENST00000581014 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
CDC42EP4-206ENST00000581014 NMUP48645 174 aa10.08□□□□□ -0.8
CDC42EP4-206ENST00000581014 NDUFA12Q9UI09 145 aa10.08□□□□□ -0.8
CDC42EP4-206ENST00000581014 IGKV2-28A0A075B6P5 120 aa10.06□□□□□ -0.8
CDC42EP4-206ENST00000581014 J3QQQ9 107 aa10.06□□□□□ -0.8
CDC42EP4-206ENST00000581014 IGKV2D-28P01615 120 aa10.06□□□□□ -0.8
CDC42EP4-206ENST00000581014 Q8NDZ9 215 aa10.06□□□□□ -0.8
CDC42EP4-206ENST00000581014 LINC00158P58513 81 aa10.05□□□□□ -0.8
CDC42EP4-206ENST00000581014 PMCHL2Q9BQD1 86 aa10.05□□□□□ -0.8
CDC42EP4-206ENST00000581014 E9PLD3 99 aa10.04□□□□□ -0.8
CDC42EP4-206ENST00000581014 C3orf79P0CE67 100 aa10.04□□□□□ -0.8
CDC42EP4-206ENST00000581014 CRYGAP11844 174 aa10.04□□□□□ -0.8
CDC42EP4-206ENST00000581014 UBE2AP49459 152 aa10.04□□□□□ -0.8
CDC42EP4-206ENST00000581014 AKR1D1P51857 326 aa10.04□□□□□ -0.8
CDC42EP4-206ENST00000581014 A0A087X002 238 aa10.03□□□□□ -0.8
CDC42EP4-206ENST00000581014 TSPEAR-AS2P59090 65 aa10.03□□□□□ -0.8
CDC42EP4-206ENST00000581014 TMEM126AQ9H061 195 aa10.03□□□□□ -0.8
CDC42EP4-206ENST00000581014 LPAP08519 4548 aa10.02□□□□□ -0.81
CDC42EP4-206ENST00000581014 M0R378 163 aa10.02□□□□□ -0.81
CDC42EP4-206ENST00000581014 LOC107984156A0A0G2JMH3 177 aa10.01□□□□□ -0.81
CDC42EP4-206ENST00000581014 SMIM13P0DJ93 91 aa10.01□□□□□ -0.81
CDC42EP4-206ENST00000581014 LGALS3P17931 250 aaKnown RBP10.01□□□□□ -0.81
CDC42EP4-206ENST00000581014 FAM229BQ4G0N7 80 aa10.01□□□□□ -0.81
CDC42EP4-206ENST00000581014 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
CDC42EP4-206ENST00000581014 ARL17AQ8IVW1 177 aa10.01□□□□□ -0.81
CDC42EP4-206ENST00000581014 TMEM238C9JI98 176 aa10□□□□□ -0.81
CDC42EP4-206ENST00000581014 C20orf202A1L168 122 aa9.99□□□□□ -0.81
CDC42EP4-206ENST00000581014 MIR7-3HGQ8N6C7 128 aa9.99□□□□□ -0.81
CDC42EP4-206ENST00000581014 A0A0U1RRA0 63 aa9.98□□□□□ -0.81
CDC42EP4-206ENST00000581014 KRTDAPP60985 99 aa9.98□□□□□ -0.81
CDC42EP4-206ENST00000581014 PRLHP81277 87 aa9.98□□□□□ -0.81
CDC42EP4-206ENST00000581014 FAM19A1Q7Z5A9 133 aa9.98□□□□□ -0.81
CDC42EP4-206ENST00000581014 IGKV2D-26A0A0A0MRZ7 120 aa9.97□□□□□ -0.81
CDC42EP4-206ENST00000581014 HIST3H2BBQ8N257 126 aa9.97□□□□□ -0.81
CDC42EP4-206ENST00000581014 TYMSOSQ8TAI1 123 aa9.97□□□□□ -0.81
CDC42EP4-206ENST00000581014 BOD1L2Q8IYS8 172 aa9.96□□□□□ -0.82
CDC42EP4-206ENST00000581014 ANAPC11Q9NYG5 84 aa9.96□□□□□ -0.82
CDC42EP4-206ENST00000581014 S100A6P06703 90 aa9.95□□□□□ -0.82
CDC42EP4-206ENST00000581014 KRTAP13-2Q52LG2 175 aa9.95□□□□□ -0.82
CDC42EP4-206ENST00000581014 A0A0J9YXY3 114 aa9.94□□□□□ -0.82
CDC42EP4-206ENST00000581014 S100A2P29034 98 aa9.94□□□□□ -0.82
CDC42EP4-206ENST00000581014 SNRPEP62304 92 aaKnown RBP9.94□□□□□ -0.82
CDC42EP4-206ENST00000581014 HIST1H2BLQ99880 126 aa9.94□□□□□ -0.82
CDC42EP4-206ENST00000581014 TIMM17BO60830 172 aa9.93□□□□□ -0.82
CDC42EP4-206ENST00000581014 SPRR1AP35321 89 aa9.93□□□□□ -0.82
CDC42EP4-206ENST00000581014 KCNQ1DNQ9H478 68 aa9.93□□□□□ -0.82
CDC42EP4-206ENST00000581014 PRYO14603 147 aa9.92□□□□□ -0.82
CDC42EP4-206ENST00000581014 CTAG1AP78358 180 aa9.92□□□□□ -0.82
CDC42EP4-206ENST00000581014 TRBV10-2A0A0K0K1G8 114 aa9.91□□□□□ -0.82
CDC42EP4-206ENST00000581014 NDUFC2O95298 119 aa9.91□□□□□ -0.82
CDC42EP4-206ENST00000581014 LINC00337Q8N6G1 96 aa9.91□□□□□ -0.82
CDC42EP4-206ENST00000581014 KRTAP4-16G5E9R7 235 aaPredicted RBP9.9□□□□□ -0.82
CDC42EP4-206ENST00000581014 PRR4Q16378 134 aa9.9□□□□□ -0.82
CDC42EP4-206ENST00000581014 C5orf52A6NGY3 159 aa9.89□□□□□ -0.83
CDC42EP4-206ENST00000581014 TSPAN13O95857 204 aa9.89□□□□□ -0.83
CDC42EP4-206ENST00000581014 MIEN1Q9BRT3 115 aa9.89□□□□□ -0.83
CDC42EP4-206ENST00000581014 HIGD2AQ9BW72 106 aa9.89□□□□□ -0.83
CDC42EP4-206ENST00000581014 ADAMTSL4-AS1Q5T5F5 129 aa9.88□□□□□ -0.83
CDC42EP4-206ENST00000581014 LITAFQ99732 161 aa9.88□□□□□ -0.83
CDC42EP4-206ENST00000581014 TRBV10-3A0A0K0K1G6 114 aa9.87□□□□□ -0.83
CDC42EP4-206ENST00000581014 ZNF815PA8K554 130 aa9.87□□□□□ -0.83
CDC42EP4-206ENST00000581014 NCR3O14931 201 aa9.87□□□□□ -0.83
CDC42EP4-206ENST00000581014 DAND5Q8N907 189 aa9.87□□□□□ -0.83
CDC42EP4-206ENST00000581014 LINC00304Q8N9R0 145 aa9.87□□□□□ -0.83
CDC42EP4-206ENST00000581014 SPRR4Q96PI1 79 aa9.87□□□□□ -0.83
CDC42EP4-206ENST00000581014 SPANXB1Q9NS25 103 aaPredicted RBP9.87□□□□□ -0.83
CDC42EP4-206ENST00000581014 PPDPFQ9H3Y8 114 aa9.86□□□□□ -0.83
CDC42EP4-206ENST00000581014 ANKRD39Q53RE8 183 aa9.85□□□□□ -0.83
CDC42EP4-206ENST00000581014 ZNF706Q9Y5V0 76 aaPredicted RBP9.85□□□□□ -0.83
CDC42EP4-206ENST00000581014 S100A12P80511 92 aa9.84□□□□□ -0.83
CDC42EP4-206ENST00000581014 ETDCA0A1B0GVM5 59 aa9.83□□□□□ -0.84
CDC42EP4-206ENST00000581014 SOSTDC1Q6X4U4 206 aa9.83□□□□□ -0.84
CDC42EP4-206ENST00000581014 Q6ZVH6 145 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms