RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 PLXNA1Q9UIW2 1896 aa2.75□□□□□ -1.97
BRIP1-202ENST00000577598 HCP5Q6MZN7 132 aa2.75□□□□□ -1.97
BRIP1-202ENST00000577598 SCN11AQ9UI33 1791 aa2.75□□□□□ -1.97
BRIP1-202ENST00000577598 NUP188Q5SRE5 1749 aa2.75□□□□□ -1.97
BRIP1-202ENST00000577598 IGFL1Q6UW32 110 aa2.75□□□□□ -1.97
BRIP1-202ENST00000577598 SLIT2O94813 1529 aa2.75□□□□□ -1.97
BRIP1-202ENST00000577598 TJP1Q07157 1748 aa2.75□□□□□ -1.97
BRIP1-202ENST00000577598 MAST4O15021 2626 aa2.75□□□□□ -1.97
BRIP1-202ENST00000577598 NFAT5O94916 1531 aa2.75□□□□□ -1.97
BRIP1-202ENST00000577598 TFF3Q07654 80 aa2.75□□□□□ -1.97
BRIP1-202ENST00000577598 A0A1B0GUL6 1792 aa2.74□□□□□ -1.97
BRIP1-202ENST00000577598 NDUFA3O95167 84 aa2.74□□□□□ -1.97
BRIP1-202ENST00000577598 TRBV6-1A0A0K0K1D8 114 aa2.74□□□□□ -1.97
BRIP1-202ENST00000577598 UBR2Q8IWV8 1755 aa2.74□□□□□ -1.97
BRIP1-202ENST00000577598 ARFGEF2Q9Y6D5 1785 aa2.74□□□□□ -1.97
BRIP1-202ENST00000577598 DEFB105AQ8NG35 78 aa2.74□□□□□ -1.97
BRIP1-202ENST00000577598 LAMB2P55268 1798 aa2.73□□□□□ -1.97
BRIP1-202ENST00000577598 SCN7AQ01118 1682 aa2.73□□□□□ -1.97
BRIP1-202ENST00000577598 AFDNP55196 1824 aaKnown RBP2.73□□□□□ -1.97
BRIP1-202ENST00000577598 PXDNQ92626 1479 aa2.73□□□□□ -1.97
BRIP1-202ENST00000577598 TRBV7-4A0A0J9YYF1 115 aa2.73□□□□□ -1.97
BRIP1-202ENST00000577598 ZNF236Q9UL36 1845 aa2.72□□□□□ -1.97
BRIP1-202ENST00000577598 NCOR2Q9Y618 2525 aa2.72□□□□□ -1.97
BRIP1-202ENST00000577598 COX7BP24311 80 aa2.72□□□□□ -1.97
BRIP1-202ENST00000577598 C1orf167Q5SNV9 1468 aa2.72□□□□□ -1.97
BRIP1-202ENST00000577598 UBR5O95071 2799 aaPredicted RBP2.72□□□□□ -1.97
BRIP1-202ENST00000577598 TNS1Q9HBL0 1735 aaKnown RBP2.72□□□□□ -1.97
BRIP1-202ENST00000577598 SPTY2D1-AS1A0A0U1RR47 76 aa2.72□□□□□ -1.97
BRIP1-202ENST00000577598 RPL38P63173 70 aaKnown RBP2.72□□□□□ -1.97
BRIP1-202ENST00000577598 COX17Q14061 63 aa2.72□□□□□ -1.97
BRIP1-202ENST00000577598 PLAC4Q8WY50 150 aa2.72□□□□□ -1.97
BRIP1-202ENST00000577598 PATJQ8NI35 1801 aa2.72□□□□□ -1.97
BRIP1-202ENST00000577598 BCL9LQ86UU0 1499 aa2.71□□□□□ -1.97
BRIP1-202ENST00000577598 RGPD5Q99666 1765 aa2.71□□□□□ -1.98
BRIP1-202ENST00000577598 DLEC1Q9Y238 1755 aa2.71□□□□□ -1.98
BRIP1-202ENST00000577598 KRTAP13-2Q52LG2 175 aa2.71□□□□□ -1.98
BRIP1-202ENST00000577598 DSPP15924 2871 aaKnown RBP2.71□□□□□ -1.98
BRIP1-202ENST00000577598 A0A096LNT2 108 aa2.71□□□□□ -1.98
BRIP1-202ENST00000577598 ARFGEF1Q9Y6D6 1849 aa2.71□□□□□ -1.98
BRIP1-202ENST00000577598 SPG11Q96JI7 2443 aa2.71□□□□□ -1.98
BRIP1-202ENST00000577598 TIAM2Q8IVF5 1701 aa2.71□□□□□ -1.98
BRIP1-202ENST00000577598 BCORQ6W2J9 1755 aa2.7□□□□□ -1.98
BRIP1-202ENST00000577598 SMIM11BQ8TCY0 68 aa2.7□□□□□ -1.98
BRIP1-202ENST00000577598 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
BRIP1-202ENST00000577598 TRANK1O15050 2925 aa2.7□□□□□ -1.98
BRIP1-202ENST00000577598 AMELXQ99217 191 aa2.7□□□□□ -1.98
BRIP1-202ENST00000577598 ANAPC11Q9NYG5 84 aa2.7□□□□□ -1.98
BRIP1-202ENST00000577598 NRAPQ86VF7 1730 aa2.7□□□□□ -1.98
BRIP1-202ENST00000577598 CHD6Q8TD26 2715 aa2.7□□□□□ -1.98
BRIP1-202ENST00000577598 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
BRIP1-202ENST00000577598 NMES1Q9C002 83 aa2.69□□□□□ -1.98
BRIP1-202ENST00000577598 LY75O60449 1722 aa2.69□□□□□ -1.98
BRIP1-202ENST00000577598 APLNQ9ULZ1 77 aa2.69□□□□□ -1.98
BRIP1-202ENST00000577598 COL16A1Q07092 1604 aaPredicted RBP2.69□□□□□ -1.98
BRIP1-202ENST00000577598 ANKRD36CQ5JPF3 1778 aa2.69□□□□□ -1.98
BRIP1-202ENST00000577598 KRTAP10-8P60410 259 aa2.68□□□□□ -1.98
BRIP1-202ENST00000577598 DOPEY1Q5JWR5 2465 aa2.68□□□□□ -1.98
BRIP1-202ENST00000577598 UBR3Q6ZT12 1888 aa2.68□□□□□ -1.98
BRIP1-202ENST00000577598 NHSQ6T4R5 1651 aa2.68□□□□□ -1.98
BRIP1-202ENST00000577598 LOC110117498A0A087WWA1 95 aa2.68□□□□□ -1.98
BRIP1-202ENST00000577598 STRCP1A6NGW2 1772 aa2.67□□□□□ -1.98
BRIP1-202ENST00000577598 ANKRD36A6QL64 1941 aa2.67□□□□□ -1.98
BRIP1-202ENST00000577598 DEFB121Q5J5C9 76 aa2.67□□□□□ -1.98
BRIP1-202ENST00000577598 LINC00472Q9H8W2 130 aa2.67□□□□□ -1.98
BRIP1-202ENST00000577598 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
BRIP1-202ENST00000577598 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.67□□□□□ -1.98
BRIP1-202ENST00000577598 TOGARAM1Q9Y4F4 1720 aa2.66□□□□□ -1.98
BRIP1-202ENST00000577598 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
BRIP1-202ENST00000577598 KCPQ6ZWJ8 1503 aa2.65□□□□□ -1.99
BRIP1-202ENST00000577598 EPG5Q9HCE0 2579 aa2.64□□□□□ -1.99
BRIP1-202ENST00000577598 DDX60LQ5H9U9 1706 aaKnown RBP2.64□□□□□ -1.99
BRIP1-202ENST00000577598 TANC1Q9C0D5 1861 aa2.64□□□□□ -1.99
BRIP1-202ENST00000577598 CPSF4LA6NMK7 179 aaKnown RBP2.64□□□□□ -1.99
BRIP1-202ENST00000577598 ZSWIM8A7E2V4 1837 aa2.64□□□□□ -1.99
BRIP1-202ENST00000577598 UTP20O75691 2785 aaKnown RBP2.64□□□□□ -1.99
BRIP1-202ENST00000577598 COL5A1P20908 1838 aaPredicted RBP2.64□□□□□ -1.99
BRIP1-202ENST00000577598 KRTAP10-6P60371 365 aaPredicted RBP2.64□□□□□ -1.99
BRIP1-202ENST00000577598 PRRC2CQ9Y520 2896 aaKnown RBP2.63□□□□□ -1.99
BRIP1-202ENST00000577598 I3L3M4 83 aa2.63□□□□□ -1.99
BRIP1-202ENST00000577598 COL5A3P25940 1745 aaPredicted RBP2.63□□□□□ -1.99
BRIP1-202ENST00000577598 SONP18583 2426 aaKnown RBP2.63□□□□□ -1.99
BRIP1-202ENST00000577598 LOC285556D6RIA3 1793 aa2.63□□□□□ -1.99
BRIP1-202ENST00000577598 BTAF1O14981 1849 aa2.63□□□□□ -1.99
BRIP1-202ENST00000577598 TNRC6CQ9HCJ0 1690 aaKnown RBP2.62□□□□□ -1.99
BRIP1-202ENST00000577598 G3V318 75 aa2.62□□□□□ -1.99
BRIP1-202ENST00000577598 LOC730098B7Z3J9 87 aa2.62□□□□□ -1.99
BRIP1-202ENST00000577598 SPRR4Q96PI1 79 aa2.62□□□□□ -1.99
BRIP1-202ENST00000577598 LINC00959A0A1B0GUT2 108 aa2.62□□□□□ -1.99
BRIP1-202ENST00000577598 PLNP26678 52 aa2.61□□□□□ -1.99
BRIP1-202ENST00000577598 KRTAP10-9P60411 292 aa2.61□□□□□ -1.99
BRIP1-202ENST00000577598 PCOTHQ58A44 107 aa2.61□□□□□ -1.99
BRIP1-202ENST00000577598 LRRC37AA6NMS7 1700 aa2.6□□□□□ -1.99
BRIP1-202ENST00000577598 RP1L1Q8IWN7 2480 aaPredicted RBP2.6□□□□□ -1.99
BRIP1-202ENST00000577598 COL4A1P02462 1669 aa2.6□□□□□ -1.99
BRIP1-202ENST00000577598 DOT1LQ8TEK3 1739 aa2.6□□□□□ -1.99
BRIP1-202ENST00000577598 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
BRIP1-202ENST00000577598 CACNA1AO00555 2505 aa2.59□□□□□ -1.99
BRIP1-202ENST00000577598 FASNP49327 2511 aaKnown RBP2.59□□□□□ -1.99
BRIP1-202ENST00000577598 ZFHX3Q15911 3703 aa2.59□□□□□ -1.99
BRIP1-202ENST00000577598 PRO3102Q9H379 93 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms