RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 DIRC1Q969H9 104 aa12.6□□□□□ -0.39
CHMP6-204ENST00000572778 IGLV5-37A0A075B6J1 123 aa12.59□□□□□ -0.39
CHMP6-204ENST00000572778 IGKCP01834 107 aa12.59□□□□□ -0.39
CHMP6-204ENST00000572778 MEIG1Q5JSS6 88 aa12.58□□□□□ -0.4
CHMP6-204ENST00000572778 NDUFA12Q9UI09 145 aa12.58□□□□□ -0.4
CHMP6-204ENST00000572778 HERVK_113P61574 105 aa12.57□□□□□ -0.4
CHMP6-204ENST00000572778 HERV-K104P63124 156 aa12.57□□□□□ -0.4
CHMP6-204ENST00000572778 LEPROTO15243 131 aa12.56□□□□□ -0.4
CHMP6-204ENST00000572778 ATP6V1G1O75348 118 aa12.56□□□□□ -0.4
CHMP6-204ENST00000572778 SMIM13P0DJ93 91 aa12.56□□□□□ -0.4
CHMP6-204ENST00000572778 RPL24P83731 157 aaKnown RBP12.56□□□□□ -0.4
CHMP6-204ENST00000572778 PLEKHB2Q96CS7 222 aa12.56□□□□□ -0.4
CHMP6-204ENST00000572778 MYMXA0A1B0GTQ4 84 aa12.55□□□□□ -0.4
CHMP6-204ENST00000572778 H0Y9J4 135 aa12.55□□□□□ -0.4
CHMP6-204ENST00000572778 VPREB1P12018 145 aa12.55□□□□□ -0.4
CHMP6-204ENST00000572778 SYS1-DBNDD2H3BUS1 97 aa12.54□□□□□ -0.4
CHMP6-204ENST00000572778 TSPEAR-AS2P59090 65 aa12.54□□□□□ -0.4
CHMP6-204ENST00000572778 ZNF861PO60384 105 aa12.53□□□□□ -0.4
CHMP6-204ENST00000572778 IGKV2-28A0A075B6P5 120 aa12.52□□□□□ -0.41
CHMP6-204ENST00000572778 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
CHMP6-204ENST00000572778 J3QQQ9 107 aa12.52□□□□□ -0.41
CHMP6-204ENST00000572778 BCE1O60756 84 aa12.52□□□□□ -0.41
CHMP6-204ENST00000572778 IGKV2D-28P01615 120 aa12.52□□□□□ -0.41
CHMP6-204ENST00000572778 S100A1P23297 94 aa12.52□□□□□ -0.41
CHMP6-204ENST00000572778 LGALS3P17931 250 aaKnown RBP12.51□□□□□ -0.41
CHMP6-204ENST00000572778 KRTAP10-8P60410 259 aa12.51□□□□□ -0.41
CHMP6-204ENST00000572778 COA6Q5JTJ3 125 aaKnown RBP12.51□□□□□ -0.41
CHMP6-204ENST00000572778 MIR7-3HGQ8N6C7 128 aa12.51□□□□□ -0.41
CHMP6-204ENST00000572778 Q8NDZ9 215 aa12.51□□□□□ -0.41
CHMP6-204ENST00000572778 TNXBP22105 4242 aa12.5□□□□□ -0.41
CHMP6-204ENST00000572778 PET117Q6UWS5 81 aa12.49□□□□□ -0.41
CHMP6-204ENST00000572778 RPL28P46779 137 aaKnown RBP12.48□□□□□ -0.41
CHMP6-204ENST00000572778 NMUP48645 174 aa12.48□□□□□ -0.41
CHMP6-204ENST00000572778 IGLV1-50A0A075B6I6 118 aa12.47□□□□□ -0.41
CHMP6-204ENST00000572778 LINC01545Q5VT33 79 aa12.47□□□□□ -0.41
CHMP6-204ENST00000572778 BOD1L2Q8IYS8 172 aa12.47□□□□□ -0.41
CHMP6-204ENST00000572778 C3orf79P0CE67 100 aa12.46□□□□□ -0.41
CHMP6-204ENST00000572778 E9PLD3 99 aa12.45□□□□□ -0.42
CHMP6-204ENST00000572778 KRTDAPP60985 99 aa12.45□□□□□ -0.42
CHMP6-204ENST00000572778 PRR26Q8N8Z3 221 aa12.45□□□□□ -0.42
CHMP6-204ENST00000572778 UBE2AP49459 152 aa12.44□□□□□ -0.42
CHMP6-204ENST00000572778 DAND5Q8N907 189 aa12.44□□□□□ -0.42
CHMP6-204ENST00000572778 TMEM238C9JI98 176 aa12.43□□□□□ -0.42
CHMP6-204ENST00000572778 M0R378 163 aa12.43□□□□□ -0.42
CHMP6-204ENST00000572778 KRTAP1-4P0C5Y4 121 aa12.42□□□□□ -0.42
CHMP6-204ENST00000572778 TMEM126AQ9H061 195 aa12.42□□□□□ -0.42
CHMP6-204ENST00000572778 NCR3O14931 201 aa12.41□□□□□ -0.42
CHMP6-204ENST00000572778 FAM19A1Q7Z5A9 133 aa12.4□□□□□ -0.42
CHMP6-204ENST00000572778 A0A0J9YXY3 114 aa12.38□□□□□ -0.43
CHMP6-204ENST00000572778 PRLHP81277 87 aa12.38□□□□□ -0.43
CHMP6-204ENST00000572778 KRTAP13-1Q8IUC0 172 aa12.38□□□□□ -0.43
CHMP6-204ENST00000572778 C20orf202A1L168 122 aa12.37□□□□□ -0.43
CHMP6-204ENST00000572778 MIEN1Q9BRT3 115 aa12.37□□□□□ -0.43
CHMP6-204ENST00000572778 HMCN2Q8NDA2 5059 aa12.37□□□□□ -0.43
CHMP6-204ENST00000572778 IGKV2D-26A0A0A0MRZ7 120 aa12.36□□□□□ -0.43
CHMP6-204ENST00000572778 LOC107984156A0A0G2JMH3 177 aa12.35□□□□□ -0.43
CHMP6-204ENST00000572778 ARL17AQ8IVW1 177 aa12.35□□□□□ -0.43
CHMP6-204ENST00000572778 NPC2P61916 151 aa12.34□□□□□ -0.43
CHMP6-204ENST00000572778 RPL13AP40429 203 aaKnown RBP12.33□□□□□ -0.44
CHMP6-204ENST00000572778 ADAMTSL4-AS1Q5T5F5 129 aa12.33□□□□□ -0.44
CHMP6-204ENST00000572778 TRBV10-3A0A0K0K1G6 114 aa12.32□□□□□ -0.44
CHMP6-204ENST00000572778 PRYO14603 147 aa12.32□□□□□ -0.44
CHMP6-204ENST00000572778 ZNF815PA8K554 130 aa12.31□□□□□ -0.44
CHMP6-204ENST00000572778 S100A2P29034 98 aa12.31□□□□□ -0.44
CHMP6-204ENST00000572778 ATOH7Q8N100 152 aa12.31□□□□□ -0.44
CHMP6-204ENST00000572778 HIST3H2BBQ8N257 126 aa12.3□□□□□ -0.44
CHMP6-204ENST00000572778 TTTY13Q9BZ97 58 aa12.3□□□□□ -0.44
CHMP6-204ENST00000572778 ANAPC11Q9NYG5 84 aa12.3□□□□□ -0.44
CHMP6-204ENST00000572778 TRBV10-2A0A0K0K1G8 114 aa12.29□□□□□ -0.44
CHMP6-204ENST00000572778 S100A12P80511 92 aa12.29□□□□□ -0.44
CHMP6-204ENST00000572778 SOSTDC1Q6X4U4 206 aa12.29□□□□□ -0.44
CHMP6-204ENST00000572778 HIGD2AQ9BW72 106 aa12.29□□□□□ -0.44
CHMP6-204ENST00000572778 KCNQ1DNQ9H478 68 aa12.29□□□□□ -0.44
CHMP6-204ENST00000572778 SPANXB1Q9NS25 103 aaPredicted RBP12.29□□□□□ -0.44
CHMP6-204ENST00000572778 S100A6P06703 90 aa12.28□□□□□ -0.44
CHMP6-204ENST00000572778 DDTP30046 118 aa12.28□□□□□ -0.44
CHMP6-204ENST00000572778 EIF4EBP3O60516 100 aaPredicted RBP12.27□□□□□ -0.45
CHMP6-204ENST00000572778 NDUFC2O95298 119 aa12.27□□□□□ -0.45
CHMP6-204ENST00000572778 CRYGAP11844 174 aa12.27□□□□□ -0.45
CHMP6-204ENST00000572778 ANKRD39Q53RE8 183 aa12.27□□□□□ -0.45
CHMP6-204ENST00000572778 LITAFQ99732 161 aa12.27□□□□□ -0.45
CHMP6-204ENST00000572778 HIST1H2BLQ99880 126 aa12.27□□□□□ -0.45
CHMP6-204ENST00000572778 A0A087X002 238 aa12.26□□□□□ -0.45
CHMP6-204ENST00000572778 TIMM17BO60830 172 aa12.26□□□□□ -0.45
CHMP6-204ENST00000572778 AKR1D1P51857 326 aa12.26□□□□□ -0.45
CHMP6-204ENST00000572778 S100A7L2Q5SY68 101 aa12.26□□□□□ -0.45
CHMP6-204ENST00000572778 ETDCA0A1B0GVM5 59 aa12.25□□□□□ -0.45
CHMP6-204ENST00000572778 SPRR1AP35321 89 aa12.25□□□□□ -0.45
CHMP6-204ENST00000572778 LINC00337Q8N6G1 96 aa12.25□□□□□ -0.45
CHMP6-204ENST00000572778 LINC00308Q8TCZ7 52 aa12.24□□□□□ -0.45
CHMP6-204ENST00000572778 SCGB1D4Q6XE38 83 aa12.23□□□□□ -0.45
CHMP6-204ENST00000572778 TYMSOSQ8TAI1 123 aa12.23□□□□□ -0.45
CHMP6-204ENST00000572778 KRTAP4-16G5E9R7 235 aaPredicted RBP12.21□□□□□ -0.45
CHMP6-204ENST00000572778 FAM229BQ4G0N7 80 aa12.21□□□□□ -0.45
CHMP6-204ENST00000572778 IGLV6-57P01721 117 aa12.2□□□□□ -0.46
CHMP6-204ENST00000572778 SNRPEP62304 92 aaKnown RBP12.2□□□□□ -0.46
CHMP6-204ENST00000572778 SPANXCQ9NY87 97 aa12.2□□□□□ -0.46
CHMP6-204ENST00000572778 KRTAP13-2Q52LG2 175 aa12.18□□□□□ -0.46
CHMP6-204ENST00000572778 PCP2Q8IVA1 136 aa12.18□□□□□ -0.46
CHMP6-204ENST00000572778 SMCR5Q8TEV8 140 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms