RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 PMCHL2Q9BQD1 86 aa4.82□□□□□ -1.64
SMG6-211ENST00000572369 C22orf24Q9Y442 160 aa4.82□□□□□ -1.64
SMG6-211ENST00000572369 TNXBP22105 4242 aa4.82□□□□□ -1.64
SMG6-211ENST00000572369 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
SMG6-211ENST00000572369 SPINK6Q6UWN8 80 aa4.81□□□□□ -1.64
SMG6-211ENST00000572369 PLEKHB2Q96CS7 222 aa4.81□□□□□ -1.64
SMG6-211ENST00000572369 MYMXA0A1B0GTQ4 84 aa4.8□□□□□ -1.64
SMG6-211ENST00000572369 LINC00587B1AMM8 73 aa4.8□□□□□ -1.64
SMG6-211ENST00000572369 SYS1-DBNDD2H3BUS1 97 aa4.8□□□□□ -1.64
SMG6-211ENST00000572369 LEPROTO15243 131 aa4.8□□□□□ -1.64
SMG6-211ENST00000572369 LGALS3P17931 250 aaKnown RBP4.8□□□□□ -1.64
SMG6-211ENST00000572369 HERV-K104P63124 156 aa4.8□□□□□ -1.64
SMG6-211ENST00000572369 REG3GQ6UW15 175 aa4.8□□□□□ -1.64
SMG6-211ENST00000572369 MRPL55Q7Z7F7 128 aaKnown RBP4.8□□□□□ -1.64
SMG6-211ENST00000572369 KRTAP7-1Q8IUC3 87 aa4.8□□□□□ -1.64
SMG6-211ENST00000572369 NDUFA12Q9UI09 145 aa4.8□□□□□ -1.64
SMG6-211ENST00000572369 GAGE10A6NGK3 116 aa4.79□□□□□ -1.64
SMG6-211ENST00000572369 KRTDAPP60985 99 aa4.79□□□□□ -1.64
SMG6-211ENST00000572369 RPL24P83731 157 aaKnown RBP4.79□□□□□ -1.64
SMG6-211ENST00000572369 SND1-IT1Q9HBX3 110 aa4.79□□□□□ -1.64
SMG6-211ENST00000572369 TP73-AS1Q9UF72 201 aa4.79□□□□□ -1.64
SMG6-211ENST00000572369 A0A0U1RQV1 116 aa4.78□□□□□ -1.64
SMG6-211ENST00000572369 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
SMG6-211ENST00000572369 J3QQQ9 107 aa4.78□□□□□ -1.64
SMG6-211ENST00000572369 IGLV7-43P04211 117 aa4.78□□□□□ -1.64
SMG6-211ENST00000572369 SMIM13P0DJ93 91 aa4.78□□□□□ -1.64
SMG6-211ENST00000572369 PET117Q6UWS5 81 aa4.78□□□□□ -1.64
SMG6-211ENST00000572369 KRTAP11-1Q8IUC1 163 aa4.78□□□□□ -1.64
SMG6-211ENST00000572369 LINC00167Q96N53 147 aa4.78□□□□□ -1.64
SMG6-211ENST00000572369 C20orf202A1L168 122 aa4.77□□□□□ -1.65
SMG6-211ENST00000572369 C3orf79P0CE67 100 aa4.77□□□□□ -1.65
SMG6-211ENST00000572369 S100A2P29034 98 aa4.77□□□□□ -1.65
SMG6-211ENST00000572369 NMUP48645 174 aa4.77□□□□□ -1.65
SMG6-211ENST00000572369 SRSF9Q13242 221 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMG6-211ENST00000572369 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
SMG6-211ENST00000572369 DIRC1Q969H9 104 aa4.77□□□□□ -1.65
SMG6-211ENST00000572369 IGLV5-37A0A075B6J1 123 aa4.76□□□□□ -1.65
SMG6-211ENST00000572369 IGKV2-28A0A075B6P5 120 aa4.76□□□□□ -1.65
SMG6-211ENST00000572369 IGKV2D-28P01615 120 aa4.76□□□□□ -1.65
SMG6-211ENST00000572369 S100A6P06703 90 aa4.76□□□□□ -1.65
SMG6-211ENST00000572369 TSPEAR-AS2P59090 65 aa4.76□□□□□ -1.65
SMG6-211ENST00000572369 COA6Q5JTJ3 125 aaKnown RBP4.76□□□□□ -1.65
SMG6-211ENST00000572369 LINC01545Q5VT33 79 aa4.76□□□□□ -1.65
SMG6-211ENST00000572369 MIR7-3HGQ8N6C7 128 aa4.76□□□□□ -1.65
SMG6-211ENST00000572369 MIEN1Q9BRT3 115 aa4.76□□□□□ -1.65
SMG6-211ENST00000572369 E9PLD3 99 aa4.75□□□□□ -1.65
SMG6-211ENST00000572369 VPREB1P12018 145 aa4.75□□□□□ -1.65
SMG6-211ENST00000572369 BOD1L2Q8IYS8 172 aa4.75□□□□□ -1.65
SMG6-211ENST00000572369 H0Y9J4 135 aa4.74□□□□□ -1.65
SMG6-211ENST00000572369 BCE1O60756 84 aa4.74□□□□□ -1.65
SMG6-211ENST00000572369 RPL28P46779 137 aaKnown RBP4.74□□□□□ -1.65
SMG6-211ENST00000572369 UBE2AP49459 152 aa4.74□□□□□ -1.65
SMG6-211ENST00000572369 DAND5Q8N907 189 aa4.74□□□□□ -1.65
SMG6-211ENST00000572369 LINC01600Q96MT4 127 aa4.74□□□□□ -1.65
SMG6-211ENST00000572369 M0R378 163 aa4.73□□□□□ -1.65
SMG6-211ENST00000572369 NCR3O14931 201 aa4.73□□□□□ -1.65
SMG6-211ENST00000572369 ZNF861PO60384 105 aa4.73□□□□□ -1.65
SMG6-211ENST00000572369 AKR1D1P51857 326 aa4.73□□□□□ -1.65
SMG6-211ENST00000572369 NPC2P61916 151 aa4.73□□□□□ -1.65
SMG6-211ENST00000572369 S100A12P80511 92 aa4.73□□□□□ -1.65
SMG6-211ENST00000572369 IGLV1-50A0A075B6I6 118 aa4.72□□□□□ -1.65
SMG6-211ENST00000572369 A0A0J9YXY3 114 aa4.72□□□□□ -1.65
SMG6-211ENST00000572369 ZNF815PA8K554 130 aa4.72□□□□□ -1.65
SMG6-211ENST00000572369 FAM19A1Q7Z5A9 133 aa4.72□□□□□ -1.65
SMG6-211ENST00000572369 ATOH7Q8N100 152 aa4.72□□□□□ -1.65
SMG6-211ENST00000572369 HIST3H2BBQ8N257 126 aa4.72□□□□□ -1.65
SMG6-211ENST00000572369 TMEM238C9JI98 176 aa4.71□□□□□ -1.66
SMG6-211ENST00000572369 SCGB1D4Q6XE38 83 aa4.71□□□□□ -1.66
SMG6-211ENST00000572369 Q8NDZ9 215 aa4.71□□□□□ -1.66
SMG6-211ENST00000572369 TMEM126AQ9H061 195 aa4.71□□□□□ -1.66
SMG6-211ENST00000572369 IGKV2D-26A0A0A0MRZ7 120 aa4.7□□□□□ -1.66
SMG6-211ENST00000572369 HSBP1L1C9JCN9 74 aa4.7□□□□□ -1.66
SMG6-211ENST00000572369 MT1HL1P0DM35 61 aa4.7□□□□□ -1.66
SMG6-211ENST00000572369 SNRPEP62304 92 aaKnown RBP4.7□□□□□ -1.66
SMG6-211ENST00000572369 PRLHP81277 87 aa4.7□□□□□ -1.66
SMG6-211ENST00000572369 S100A7L2Q5SY68 101 aa4.7□□□□□ -1.66
SMG6-211ENST00000572369 HIST1H2BLQ99880 126 aa4.7□□□□□ -1.66
SMG6-211ENST00000572369 PRYO14603 147 aa4.69□□□□□ -1.66
SMG6-211ENST00000572369 DDTP30046 118 aa4.69□□□□□ -1.66
SMG6-211ENST00000572369 ADAMTSL4-AS1Q5T5F5 129 aa4.69□□□□□ -1.66
SMG6-211ENST00000572369 PRR26Q8N8Z3 221 aa4.69□□□□□ -1.66
SMG6-211ENST00000572369 TTTY13Q9BZ97 58 aa4.69□□□□□ -1.66
SMG6-211ENST00000572369 TRBV10-3A0A0K0K1G6 114 aa4.68□□□□□ -1.66
SMG6-211ENST00000572369 ETDCA0A1B0GVM5 59 aa4.68□□□□□ -1.66
SMG6-211ENST00000572369 TIMM17BO60830 172 aa4.68□□□□□ -1.66
SMG6-211ENST00000572369 SCGB1D1O95968 90 aa4.68□□□□□ -1.66
SMG6-211ENST00000572369 ANKRD39Q53RE8 183 aa4.68□□□□□ -1.66
SMG6-211ENST00000572369 HIGD2AQ9BW72 106 aa4.68□□□□□ -1.66
SMG6-211ENST00000572369 SPANXB1Q9NS25 103 aaPredicted RBP4.68□□□□□ -1.66
SMG6-211ENST00000572369 LOC107984156A0A0G2JMH3 177 aa4.67□□□□□ -1.66
SMG6-211ENST00000572369 TRBV10-2A0A0K0K1G8 114 aa4.67□□□□□ -1.66
SMG6-211ENST00000572369 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
SMG6-211ENST00000572369 NDUFC2O95298 119 aa4.67□□□□□ -1.66
SMG6-211ENST00000572369 RPL13AP40429 203 aaKnown RBP4.67□□□□□ -1.66
SMG6-211ENST00000572369 KRTAP10-8P60410 259 aa4.67□□□□□ -1.66
SMG6-211ENST00000572369 ARL17AQ8IVW1 177 aa4.67□□□□□ -1.66
SMG6-211ENST00000572369 OR13C6PQ8NH95 151 aa4.67□□□□□ -1.66
SMG6-211ENST00000572369 LPAP08519 4548 aa4.66□□□□□ -1.66
SMG6-211ENST00000572369 SOSTDC1Q6X4U4 206 aa4.66□□□□□ -1.66
SMG6-211ENST00000572369 LINC00308Q8TCZ7 52 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 232.6 ms