RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 HIST1H4GQ99525 98 aa3.29□□□□□ -1.88
KARSP3-201ENST00000571212 IGKV2D-26A0A0A0MRZ7 120 aa3.28□□□□□ -1.88
KARSP3-201ENST00000571212 C16orf90A8MZG2 172 aa3.28□□□□□ -1.88
KARSP3-201ENST00000571212 H7C1H1 209 aa3.28□□□□□ -1.88
KARSP3-201ENST00000571212 GNRH2O43555 120 aa3.28□□□□□ -1.88
KARSP3-201ENST00000571212 FCER1GP30273 86 aa3.28□□□□□ -1.88
KARSP3-201ENST00000571212 IFI27P40305 119 aaPredicted RBP3.28□□□□□ -1.88
KARSP3-201ENST00000571212 UBE2D1P51668 147 aa3.28□□□□□ -1.88
KARSP3-201ENST00000571212 FAM104BQ5XKR9 115 aa3.28□□□□□ -1.88
KARSP3-201ENST00000571212 ORMDL3Q8N138 153 aa3.28□□□□□ -1.88
KARSP3-201ENST00000571212 TIMM8BQ9Y5J9 83 aaPredicted RBP3.28□□□□□ -1.88
KARSP3-201ENST00000571212 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
KARSP3-201ENST00000571212 LRP1BQ9NZR2 4599 aa3.27□□□□□ -1.89
KARSP3-201ENST00000571212 TCL1BO95988 128 aa3.27□□□□□ -1.89
KARSP3-201ENST00000571212 PMAIP1Q13794 54 aa3.27□□□□□ -1.89
KARSP3-201ENST00000571212 C5orf38Q86SI9 138 aa3.27□□□□□ -1.89
KARSP3-201ENST00000571212 FAM218AQ96MZ4 157 aa3.27□□□□□ -1.89
KARSP3-201ENST00000571212 UPK3BQ9BT76 320 aa3.27□□□□□ -1.89
KARSP3-201ENST00000571212 NXT2Q9NPJ8 142 aaKnown RBP3.27□□□□□ -1.89
KARSP3-201ENST00000571212 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
KARSP3-201ENST00000571212 hADV29S1A0JD25 119 aa3.26□□□□□ -1.89
KARSP3-201ENST00000571212 PLNP26678 52 aa3.26□□□□□ -1.89
KARSP3-201ENST00000571212 LINC00315P59091 139 aa3.26□□□□□ -1.89
KARSP3-201ENST00000571212 FAM222AQ5U5X8 452 aa3.26□□□□□ -1.89
KARSP3-201ENST00000571212 LINC00643Q86TS7 51 aa3.26□□□□□ -1.89
KARSP3-201ENST00000571212 COPS9Q8WXC6 57 aa3.26□□□□□ -1.89
KARSP3-201ENST00000571212 DSCR8Q96T75 97 aa3.26□□□□□ -1.89
KARSP3-201ENST00000571212 DPH3P1Q9H4G8 78 aa3.26□□□□□ -1.89
KARSP3-201ENST00000571212 KIF25-AS1Q9Y6Z4 181 aa3.26□□□□□ -1.89
KARSP3-201ENST00000571212 IGHV3OR16-12A0A075B7B8 117 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 TRAV12-1A0A0B4J245 112 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 LOC107984156A0A0G2JMH3 177 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 LINC01549A6NIU2 74 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 D6R8Y8 96 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 H3BNG1 76 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 ARMS2P0C7Q2 107 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 HTN3P15516 51 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 SRSF9Q13242 221 aaKnown RBP eCLIP3.25□□□□□ -1.89
KARSP3-201ENST00000571212 SDIM1Q6ZPB5 146 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 ARL17AQ8IVW1 177 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 LINC01561Q8N1V8 128 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 C6orf223Q8N319 242 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 UBE2WQ96B02 151 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 NOP10Q9NPE3 64 aaKnown RBP3.25□□□□□ -1.89
KARSP3-201ENST00000571212 LAMTOR3Q9UHA4 124 aa3.25□□□□□ -1.89
KARSP3-201ENST00000571212 APOBP04114 4563 aaKnown RBP3.25□□□□□ -1.89
KARSP3-201ENST00000571212 DMBT1Q9UGM3 2413 aaPredicted RBP3.24□□□□□ -1.89
KARSP3-201ENST00000571212 TRBV10-2A0A0K0K1G8 114 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 NBDYA0A0U1RRE5 68 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 H3BT86 120 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 H3BVH4 76 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 DAD1P61803 113 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 NPC2P61916 151 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 MRPS36P82909 103 aaKnown RBP3.24□□□□□ -1.89
KARSP3-201ENST00000571212 ZNF56Q15929 161 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 MRPL51Q4U2R6 128 aaKnown RBP3.24□□□□□ -1.89
KARSP3-201ENST00000571212 ZFP2Q6ZN57 461 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 Q6ZRU5 148 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 Q6ZTI0 123 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 SERP2Q8N6R1 65 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 HERC1Q15751 4861 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 DNAH5Q8TE73 4624 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 TMSB15BA0A087X1C1 80 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 TRAV26-2A0A0B4J265 109 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 LOC389332A0A1B0GUA5 103 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 HTN1P15515 57 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 CKS2P33552 79 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 ATXN8Q156A1 80 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 PRR15Q8IV56 129 aa3.24□□□□□ -1.89
KARSP3-201ENST00000571212 TRBV6-4A0A1B0GX49 114 aa3.23□□□□□ -1.89
KARSP3-201ENST00000571212 F8VRH5 84 aa3.23□□□□□ -1.89
KARSP3-201ENST00000571212 CCL18P55774 89 aa3.23□□□□□ -1.89
KARSP3-201ENST00000571212 HERVK_113P61574 105 aa3.23□□□□□ -1.89
KARSP3-201ENST00000571212 RPL18AQ02543 176 aaKnown RBP3.23□□□□□ -1.89
KARSP3-201ENST00000571212 LYZL1Q6UWQ5 148 aa3.23□□□□□ -1.89
KARSP3-201ENST00000571212 Q8N8P6 123 aa3.23□□□□□ -1.89
KARSP3-201ENST00000571212 VSIG2Q96IQ7 327 aa3.23□□□□□ -1.89
KARSP3-201ENST00000571212 TTTY13Q9BZ97 58 aa3.23□□□□□ -1.89
KARSP3-201ENST00000571212 CYSTM1Q9H1C7 97 aa3.23□□□□□ -1.89
KARSP3-201ENST00000571212 PRO1854Q9UHT4 67 aa3.23□□□□□ -1.89
KARSP3-201ENST00000571212 A0A087WZ39 114 aa3.22□□□□□ -1.89
KARSP3-201ENST00000571212 TRGV1A0A0A0MS02 117 aa3.22□□□□□ -1.89
KARSP3-201ENST00000571212 K7EMI3 77 aa3.22□□□□□ -1.89
KARSP3-201ENST00000571212 IGHV3-53P01767 116 aa3.22□□□□□ -1.89
KARSP3-201ENST00000571212 S100A4P26447 101 aaKnown RBP3.22□□□□□ -1.89
KARSP3-201ENST00000571212 BRK1Q8WUW1 75 aa3.22□□□□□ -1.89
KARSP3-201ENST00000571212 MRPL35Q9NZE8 188 aaKnown RBP3.22□□□□□ -1.89
KARSP3-201ENST00000571212 PRO0255Q9UI72 69 aa3.22□□□□□ -1.89
KARSP3-201ENST00000571212 LINC00588Q9Y4M8 146 aa3.22□□□□□ -1.89
KARSP3-201ENST00000571212 PHLDA3Q9Y5J5 127 aa3.22□□□□□ -1.89
KARSP3-201ENST00000571212 A0A0B4J2C4 111 aa3.21□□□□□ -1.9
KARSP3-201ENST00000571212 TRBV7-6A0A0J9YX20 115 aa3.21□□□□□ -1.9
KARSP3-201ENST00000571212 TRBV10-1A0A0K0K1A3 114 aa3.21□□□□□ -1.9
KARSP3-201ENST00000571212 A0A0U1RQV1 116 aa3.21□□□□□ -1.9
KARSP3-201ENST00000571212 TEX49A0A1B0GTD5 131 aa3.21□□□□□ -1.9
KARSP3-201ENST00000571212 M0QY20 66 aa3.21□□□□□ -1.9
KARSP3-201ENST00000571212 DEFB130BP0DP73 79 aa3.21□□□□□ -1.9
KARSP3-201ENST00000571212 DEFB130AP0DP74 79 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms