RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 SMIM13P0DJ93 91 aa7.93□□□□□ -1.14
CDT1-203ENST00000569140 LINC01545Q5VT33 79 aa7.93□□□□□ -1.14
CDT1-203ENST00000569140 MRPL55Q7Z7F7 128 aaKnown RBP7.92□□□□□ -1.14
CDT1-203ENST00000569140 KRTAP11-1Q8IUC1 163 aa7.92□□□□□ -1.14
CDT1-203ENST00000569140 RPL37AP8A6NKH3 93 aa7.91□□□□□ -1.14
CDT1-203ENST00000569140 LINC00587B1AMM8 73 aa7.9□□□□□ -1.14
CDT1-203ENST00000569140 E9PLD3 99 aa7.9□□□□□ -1.14
CDT1-203ENST00000569140 NMUP48645 174 aa7.9□□□□□ -1.14
CDT1-203ENST00000569140 RPL24P83731 157 aaKnown RBP7.9□□□□□ -1.14
CDT1-203ENST00000569140 HIST3H2BBQ8N257 126 aa7.9□□□□□ -1.14
CDT1-203ENST00000569140 MIR7-3HGQ8N6C7 128 aa7.9□□□□□ -1.14
CDT1-203ENST00000569140 TP73-AS1Q9UF72 201 aa7.9□□□□□ -1.14
CDT1-203ENST00000569140 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.14
CDT1-203ENST00000569140 SPINK6Q6UWN8 80 aa7.89□□□□□ -1.15
CDT1-203ENST00000569140 LINC00167Q96N53 147 aa7.89□□□□□ -1.15
CDT1-203ENST00000569140 PKHD1L1Q86WI1 4243 aa7.88□□□□□ -1.15
CDT1-203ENST00000569140 IGLV7-43P04211 117 aa7.88□□□□□ -1.15
CDT1-203ENST00000569140 ATOH7Q8N100 152 aa7.88□□□□□ -1.15
CDT1-203ENST00000569140 DAND5Q8N907 189 aa7.88□□□□□ -1.15
CDT1-203ENST00000569140 IGLV5-37A0A075B6J1 123 aa7.87□□□□□ -1.15
CDT1-203ENST00000569140 IGKV2-28A0A075B6P5 120 aa7.87□□□□□ -1.15
CDT1-203ENST00000569140 KRTAP29-1A8MX34 341 aaPredicted RBP7.87□□□□□ -1.15
CDT1-203ENST00000569140 IGKV2D-28P01615 120 aa7.87□□□□□ -1.15
CDT1-203ENST00000569140 VPREB1P12018 145 aa7.87□□□□□ -1.15
CDT1-203ENST00000569140 BOD1L2Q8IYS8 172 aa7.87□□□□□ -1.15
CDT1-203ENST00000569140 HIST1H2BLQ99880 126 aa7.87□□□□□ -1.15
CDT1-203ENST00000569140 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
CDT1-203ENST00000569140 NCR3O14931 201 aa7.86□□□□□ -1.15
CDT1-203ENST00000569140 OXTP01178 125 aa7.86□□□□□ -1.15
CDT1-203ENST00000569140 SNRPEP62304 92 aaKnown RBP7.86□□□□□ -1.15
CDT1-203ENST00000569140 REG3GQ6UW15 175 aa7.86□□□□□ -1.15
CDT1-203ENST00000569140 MIEN1Q9BRT3 115 aa7.86□□□□□ -1.15
CDT1-203ENST00000569140 ZNF815PA8K554 130 aa7.85□□□□□ -1.15
CDT1-203ENST00000569140 NPC2P61916 151 aa7.85□□□□□ -1.15
CDT1-203ENST00000569140 IGKV2D-26A0A0A0MRZ7 120 aa7.84□□□□□ -1.15
CDT1-203ENST00000569140 A0A0J9YXY3 114 aa7.84□□□□□ -1.15
CDT1-203ENST00000569140 AKR1D1P51857 326 aa7.84□□□□□ -1.15
CDT1-203ENST00000569140 SRSF9Q13242 221 aaKnown RBP eCLIP7.84□□□□□ -1.15
CDT1-203ENST00000569140 Q8NDZ9 215 aa7.84□□□□□ -1.15
CDT1-203ENST00000569140 DIRC1Q969H9 104 aa7.83□□□□□ -1.16
CDT1-203ENST00000569140 TTTY13Q9BZ97 58 aa7.83□□□□□ -1.16
CDT1-203ENST00000569140 MYCBP2O75592 4640 aa7.83□□□□□ -1.16
CDT1-203ENST00000569140 BCE1O60756 84 aa7.82□□□□□ -1.16
CDT1-203ENST00000569140 UBE2AP49459 152 aa7.82□□□□□ -1.16
CDT1-203ENST00000569140 ANKRD39Q53RE8 183 aa7.82□□□□□ -1.16
CDT1-203ENST00000569140 HSBP1L1C9JCN9 74 aa7.81□□□□□ -1.16
CDT1-203ENST00000569140 M0R378 163 aa7.81□□□□□ -1.16
CDT1-203ENST00000569140 IGLV1-50A0A075B6I6 118 aa7.8□□□□□ -1.16
CDT1-203ENST00000569140 TMEM238C9JI98 176 aa7.8□□□□□ -1.16
CDT1-203ENST00000569140 H0Y9J4 135 aa7.8□□□□□ -1.16
CDT1-203ENST00000569140 SCGB1D1O95968 90 aa7.8□□□□□ -1.16
CDT1-203ENST00000569140 RPL28P46779 137 aaKnown RBP7.8□□□□□ -1.16
CDT1-203ENST00000569140 SCGB1D4Q6XE38 83 aa7.8□□□□□ -1.16
CDT1-203ENST00000569140 FAM19A1Q7Z5A9 133 aa7.8□□□□□ -1.16
CDT1-203ENST00000569140 C5orf52A6NGY3 159 aa7.79□□□□□ -1.16
CDT1-203ENST00000569140 ZNF861PO60384 105 aa7.79□□□□□ -1.16
CDT1-203ENST00000569140 ADAMTSL4-AS1Q5T5F5 129 aa7.79□□□□□ -1.16
CDT1-203ENST00000569140 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
CDT1-203ENST00000569140 S100A12P80511 92 aa7.77□□□□□ -1.17
CDT1-203ENST00000569140 PRLHP81277 87 aa7.77□□□□□ -1.17
CDT1-203ENST00000569140 LINC01600Q96MT4 127 aa7.77□□□□□ -1.17
CDT1-203ENST00000569140 TIMM17BO60830 172 aa7.76□□□□□ -1.17
CDT1-203ENST00000569140 S100A7L2Q5SY68 101 aa7.76□□□□□ -1.17
CDT1-203ENST00000569140 SOSTDC1Q6X4U4 206 aa7.76□□□□□ -1.17
CDT1-203ENST00000569140 PCP2Q8IVA1 136 aa7.76□□□□□ -1.17
CDT1-203ENST00000569140 SPANXB1Q9NS25 103 aaPredicted RBP7.76□□□□□ -1.17
CDT1-203ENST00000569140 TMA7Q9Y2S6 64 aaKnown RBP7.76□□□□□ -1.17
CDT1-203ENST00000569140 FAT3Q8TDW7 4589 aa7.76□□□□□ -1.17
CDT1-203ENST00000569140 LOC107984156A0A0G2JMH3 177 aa7.75□□□□□ -1.17
CDT1-203ENST00000569140 TRBV10-3A0A0K0K1G6 114 aa7.75□□□□□ -1.17
CDT1-203ENST00000569140 DDTP30046 118 aa7.75□□□□□ -1.17
CDT1-203ENST00000569140 ARL17AQ8IVW1 177 aa7.75□□□□□ -1.17
CDT1-203ENST00000569140 LINC00308Q8TCZ7 52 aa7.75□□□□□ -1.17
CDT1-203ENST00000569140 LITAFQ99732 161 aa7.75□□□□□ -1.17
CDT1-203ENST00000569140 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
CDT1-203ENST00000569140 PRYO14603 147 aa7.74□□□□□ -1.17
CDT1-203ENST00000569140 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
CDT1-203ENST00000569140 TRBV10-2A0A0K0K1G8 114 aa7.73□□□□□ -1.17
CDT1-203ENST00000569140 ETDCA0A1B0GVM5 59 aa7.73□□□□□ -1.17
CDT1-203ENST00000569140 EIF4EBP3O60516 100 aaPredicted RBP7.73□□□□□ -1.17
CDT1-203ENST00000569140 NDUFC2O95298 119 aa7.73□□□□□ -1.17
CDT1-203ENST00000569140 PRR26Q8N8Z3 221 aa7.72□□□□□ -1.17
CDT1-203ENST00000569140 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
CDT1-203ENST00000569140 HIGD2AQ9BW72 106 aa7.72□□□□□ -1.17
CDT1-203ENST00000569140 SPANXCQ9NY87 97 aa7.72□□□□□ -1.17
CDT1-203ENST00000569140 SPANXDQ9BXN6 97 aa7.71□□□□□ -1.18
CDT1-203ENST00000569140 DMBT1Q9UGM3 2413 aaPredicted RBP7.7□□□□□ -1.18
CDT1-203ENST00000569140 KRTAP13-1Q8IUC0 172 aa7.7□□□□□ -1.18
CDT1-203ENST00000569140 COPS9Q8WXC6 57 aa7.7□□□□□ -1.18
CDT1-203ENST00000569140 KCNQ1DNQ9H478 68 aa7.7□□□□□ -1.18
CDT1-203ENST00000569140 TRAV23DV6A0A075B6W5 121 aa7.69□□□□□ -1.18
CDT1-203ENST00000569140 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
CDT1-203ENST00000569140 IGLV6-57P01721 117 aa7.67□□□□□ -1.18
CDT1-203ENST00000569140 IFITM1P13164 125 aa7.67□□□□□ -1.18
CDT1-203ENST00000569140 MUSTN1Q8IVN3 82 aa7.67□□□□□ -1.18
CDT1-203ENST00000569140 LINC00337Q8N6G1 96 aa7.67□□□□□ -1.18
CDT1-203ENST00000569140 PAM16Q9Y3D7 125 aa7.67□□□□□ -1.18
CDT1-203ENST00000569140 HERC1Q15751 4861 aa7.67□□□□□ -1.18
CDT1-203ENST00000569140 SPRR1AP35321 89 aa7.66□□□□□ -1.18
CDT1-203ENST00000569140 RPL13AP40429 203 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms