RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 CNOT1A5YKK6 2376 aaKnown RBP3.69□□□□□ -1.82
CHD9-210ENST00000564582 MKI67P46013 3256 aaKnown RBP3.69□□□□□ -1.82
CHD9-210ENST00000564582 IGLV4-60A0A075B6I1 120 aa3.69□□□□□ -1.82
CHD9-210ENST00000564582 LOC101927531A0A1B0GV80 90 aa3.69□□□□□ -1.82
CHD9-210ENST00000564582 RPL37AP8A6NKH3 93 aa3.69□□□□□ -1.82
CHD9-210ENST00000564582 MAPK1IP1LQ8NDC0 245 aa3.69□□□□□ -1.82
CHD9-210ENST00000564582 KCNQ1DNQ9H478 68 aa3.69□□□□□ -1.82
CHD9-210ENST00000564582 NOP10Q9NPE3 64 aaKnown RBP3.69□□□□□ -1.82
CHD9-210ENST00000564582 Q9UF83 564 aa3.69□□□□□ -1.82
CHD9-210ENST00000564582 SPTBN1Q01082 2364 aaKnown RBP3.69□□□□□ -1.82
CHD9-210ENST00000564582 CEP290O15078 2479 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 IGKV3OR2-268A0A0C4DH90 116 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 CHKB-CPT1BH3BT56 60 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 EGFEM1PQ0D2K5 195 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 FAM229BQ4G0N7 80 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 BRD3OSQ6XYD6 125 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 C7orf65Q6ZTY9 151 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 LCA10Q71F78 164 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 CHCHD10Q8WYQ3 142 aaPredicted RBP3.68□□□□□ -1.82
CHD9-210ENST00000564582 LINC00208Q96KT6 92 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 PRO3102Q9H379 93 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
CHD9-210ENST00000564582 XIRP2A4UGR9 3374 aa3.67□□□□□ -1.82
CHD9-210ENST00000564582 FRYQ5TBA9 3013 aa3.67□□□□□ -1.82
CHD9-210ENST00000564582 REG3AQ06141 175 aa3.67□□□□□ -1.82
CHD9-210ENST00000564582 SPAG11BQ08648 103 aa3.67□□□□□ -1.82
CHD9-210ENST00000564582 LINC00612Q8N6U2 182 aa3.67□□□□□ -1.82
CHD9-210ENST00000564582 SPRR4Q96PI1 79 aa3.67□□□□□ -1.82
CHD9-210ENST00000564582 LAMA1P25391 3075 aa3.66□□□□□ -1.82
CHD9-210ENST00000564582 KPRPQ5T749 579 aaPredicted RBP3.66□□□□□ -1.82
CHD9-210ENST00000564582 RBM12B-AS1Q9P1G2 102 aa3.66□□□□□ -1.82
CHD9-210ENST00000564582 CREBBPQ92793 2442 aa3.66□□□□□ -1.82
CHD9-210ENST00000564582 PTPRQQ9UMZ3 2332 aa3.66□□□□□ -1.82
CHD9-210ENST00000564582 SPTBN2O15020 2390 aa3.66□□□□□ -1.82
CHD9-210ENST00000564582 TECTAO75443 2155 aa3.65□□□□□ -1.82
CHD9-210ENST00000564582 C19orf84I3L1E1 186 aa3.65□□□□□ -1.83
CHD9-210ENST00000564582 PSPHP1O15172 72 aa3.65□□□□□ -1.83
CHD9-210ENST00000564582 Q5VV11 94 aa3.65□□□□□ -1.83
CHD9-210ENST00000564582 NKAPP1Q8N9T2 125 aa3.65□□□□□ -1.83
CHD9-210ENST00000564582 Q8NBF4 154 aa3.65□□□□□ -1.83
CHD9-210ENST00000564582 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.64□□□□□ -1.83
CHD9-210ENST00000564582 A6NED7 52 aa3.64□□□□□ -1.83
CHD9-210ENST00000564582 SCXQ7RTU7 201 aa3.64□□□□□ -1.83
CHD9-210ENST00000564582 CCL19Q99731 98 aa3.64□□□□□ -1.83
CHD9-210ENST00000564582 ZNF702PQ9H963 129 aa3.64□□□□□ -1.83
CHD9-210ENST00000564582 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
CHD9-210ENST00000564582 ZDBF2Q9HCK1 2354 aa3.64□□□□□ -1.83
CHD9-210ENST00000564582 ZZEF1O43149 2961 aa3.64□□□□□ -1.83
CHD9-210ENST00000564582 COL6A6A6NMZ7 2263 aa3.64□□□□□ -1.83
CHD9-210ENST00000564582 PRRC2CQ9Y520 2896 aaKnown RBP3.64□□□□□ -1.83
CHD9-210ENST00000564582 SZT2Q5T011 3432 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 MED13LQ71F56 2210 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 PCNX1Q96RV3 2341 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 A8MUN3 132 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 KRTAP16-1A8MUX0 517 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 ANGP03950 147 aaKnown RBP3.63□□□□□ -1.83
CHD9-210ENST00000564582 PRR3P79522 188 aaKnown RBP3.63□□□□□ -1.83
CHD9-210ENST00000564582 DEFB112Q30KQ8 113 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 LELP1Q5T871 98 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 LINC01006Q8NI28 216 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 WFDC10AQ9H1F0 79 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 PRR34Q9NV39 138 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 PIEZO2Q9H5I5 2752 aa3.63□□□□□ -1.83
CHD9-210ENST00000564582 APC2O95996 2303 aa3.62□□□□□ -1.83
CHD9-210ENST00000564582 C9orf116Q5BN46 136 aaPredicted RBP3.62□□□□□ -1.83
CHD9-210ENST00000564582 C1orf137Q5JT78 98 aa3.62□□□□□ -1.83
CHD9-210ENST00000564582 CASC2Q6XLA1 102 aa3.62□□□□□ -1.83
CHD9-210ENST00000564582 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
CHD9-210ENST00000564582 VCANP13611 3396 aa3.61□□□□□ -1.83
CHD9-210ENST00000564582 A6NN06 94 aa3.61□□□□□ -1.83
CHD9-210ENST00000564582 C16orf90A8MZG2 172 aa3.61□□□□□ -1.83
CHD9-210ENST00000564582 M0R2N4 97 aa3.61□□□□□ -1.83
CHD9-210ENST00000564582 PRM2P04554 102 aa3.61□□□□□ -1.83
CHD9-210ENST00000564582 APOC4P55056 127 aa3.61□□□□□ -1.83
CHD9-210ENST00000564582 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
CHD9-210ENST00000564582 CSNK1G2-AS1Q8NCQ2 148 aa3.61□□□□□ -1.83
CHD9-210ENST00000564582 SPTSSBQ8NFR3 76 aa3.61□□□□□ -1.83
CHD9-210ENST00000564582 PRR15LQ9BU68 103 aa3.61□□□□□ -1.83
CHD9-210ENST00000564582 TRIOO75962 3097 aa3.6□□□□□ -1.83
CHD9-210ENST00000564582 LAMA3Q16787 3333 aa3.6□□□□□ -1.83
CHD9-210ENST00000564582 UNQ6190/PRO20217Q6UXQ8 127 aa3.6□□□□□ -1.83
CHD9-210ENST00000564582 CAMK2N2Q96S95 79 aa3.6□□□□□ -1.83
CHD9-210ENST00000564582 GPR179Q6PRD1 2367 aa3.6□□□□□ -1.83
CHD9-210ENST00000564582 EP300Q09472 2414 aaPredicted RBP3.6□□□□□ -1.83
CHD9-210ENST00000564582 CFAP54Q96N23 3096 aa3.59□□□□□ -1.83
CHD9-210ENST00000564582 H3BNG1 76 aa3.59□□□□□ -1.83
CHD9-210ENST00000564582 C3orf84H3BNL1 204 aa3.59□□□□□ -1.83
CHD9-210ENST00000564582 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
CHD9-210ENST00000564582 CNBPP62633 177 aaKnown RBP3.59□□□□□ -1.83
CHD9-210ENST00000564582 DSPP15924 2871 aaKnown RBP3.59□□□□□ -1.84
CHD9-210ENST00000564582 ACACAQ13085 2346 aa3.59□□□□□ -1.84
CHD9-210ENST00000564582 SORL1Q92673 2214 aa3.58□□□□□ -1.84
CHD9-210ENST00000564582 IGLV8-61A0A075B6I0 122 aa3.58□□□□□ -1.84
CHD9-210ENST00000564582 IGLV1-51P01701 117 aa3.58□□□□□ -1.84
CHD9-210ENST00000564582 TLX1NBP0CAT3 122 aa3.58□□□□□ -1.84
CHD9-210ENST00000564582 DSCR10P59022 87 aa3.58□□□□□ -1.84
CHD9-210ENST00000564582 Q6ZRX8 168 aa3.58□□□□□ -1.84
CHD9-210ENST00000564582 Q8N377 158 aa3.58□□□□□ -1.84
CHD9-210ENST00000564582 C6orf48Q9UBA6 75 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms