RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 RETNQ9HD89 108 aa13.48□□□□□ -0.25
MSLN-205ENST00000563941 OXLD1Q5BKU9 147 aa13.48□□□□□ -0.25
MSLN-205ENST00000563941 B5MCH6 92 aa13.46□□□□□ -0.25
MSLN-205ENST00000563941 KRTAP10-11P60412 298 aa13.45□□□□□ -0.26
MSLN-205ENST00000563941 GVQW2A0A096LPI5 108 aaPredicted RBP13.44□□□□□ -0.26
MSLN-205ENST00000563941 KPRPQ5T749 579 aaPredicted RBP13.44□□□□□ -0.26
MSLN-205ENST00000563941 WFDC10BQ8IUB3 73 aa13.44□□□□□ -0.26
MSLN-205ENST00000563941 LINC00846Q9NV44 126 aa13.43□□□□□ -0.26
MSLN-205ENST00000563941 TMEM256-PLSCR3K7ERE1 68 aa13.43□□□□□ -0.26
MSLN-205ENST00000563941 C6orf48Q9UBA6 75 aa13.43□□□□□ -0.26
MSLN-205ENST00000563941 H3BNG1 76 aa13.42□□□□□ -0.26
MSLN-205ENST00000563941 RPL18AQ02543 176 aaKnown RBP13.42□□□□□ -0.26
MSLN-205ENST00000563941 JMJD7-PLA2G4BH0Y9G9 81 aa13.41□□□□□ -0.26
MSLN-205ENST00000563941 LINC00575Q6W349 94 aa13.41□□□□□ -0.26
MSLN-205ENST00000563941 IGLV6-57P01721 117 aa13.4□□□□□ -0.26
MSLN-205ENST00000563941 Q6ZTC4 211 aa13.4□□□□□ -0.26
MSLN-205ENST00000563941 CCKP06307 115 aa13.39□□□□□ -0.27
MSLN-205ENST00000563941 SS18L2Q9UHA2 77 aa13.38□□□□□ -0.27
MSLN-205ENST00000563941 Q6JHZ5 121 aa13.37□□□□□ -0.27
MSLN-205ENST00000563941 XAGE1AQ9HD64 81 aa13.37□□□□□ -0.27
MSLN-205ENST00000563941 hADV29S1A0JD25 119 aa13.36□□□□□ -0.27
MSLN-205ENST00000563941 HIGD2BQ4VC39 106 aa13.36□□□□□ -0.27
MSLN-205ENST00000563941 KRTAP26-1Q6PEX3 210 aa13.36□□□□□ -0.27
MSLN-205ENST00000563941 ZNF561-AS1K7EIQ3 104 aa13.35□□□□□ -0.27
MSLN-205ENST00000563941 IGKV3D-7A0A0C4DH55 119 aa13.34□□□□□ -0.27
MSLN-205ENST00000563941 EGFEM1PQ0D2K5 195 aa13.34□□□□□ -0.27
MSLN-205ENST00000563941 CAMK2N2Q96S95 79 aa13.34□□□□□ -0.27
MSLN-205ENST00000563941 TRBV10-3A0A0K0K1G6 114 aa13.33□□□□□ -0.28
MSLN-205ENST00000563941 ESRGQ1W209 222 aa13.33□□□□□ -0.28
MSLN-205ENST00000563941 FBN1P35555 2871 aaKnown RBP13.33□□□□□ -0.28
MSLN-205ENST00000563941 KRTAP24-1Q3LI83 254 aa13.32□□□□□ -0.28
MSLN-205ENST00000563941 TRAV23DV6A0A075B6W5 121 aa13.31□□□□□ -0.28
MSLN-205ENST00000563941 HIST1H4AP62805 103 aaKnown RBP13.3□□□□□ -0.28
MSLN-205ENST00000563941 C15orf56Q8N910 161 aa13.3□□□□□ -0.28
MSLN-205ENST00000563941 STAB1Q9NY15 2570 aa13.3□□□□□ -0.28
MSLN-205ENST00000563941 Q6ZRU5 148 aa13.29□□□□□ -0.28
MSLN-205ENST00000563941 DIRC1Q969H9 104 aa13.29□□□□□ -0.28
MSLN-205ENST00000563941 PKD1L1Q8TDX9 2849 aa13.28□□□□□ -0.28
MSLN-205ENST00000563941 DEFB131BA0A096LNP1 70 aa13.27□□□□□ -0.29
MSLN-205ENST00000563941 VPREB1P12018 145 aa13.27□□□□□ -0.29
MSLN-205ENST00000563941 Q6ZQY7 126 aa13.27□□□□□ -0.29
MSLN-205ENST00000563941 C1orf43Q9BWL3 253 aa13.26□□□□□ -0.29
MSLN-205ENST00000563941 ZNF73O43830 326 aaPredicted RBP13.25□□□□□ -0.29
MSLN-205ENST00000563941 RBM3P98179 157 aaKnown RBP13.25□□□□□ -0.29
MSLN-205ENST00000563941 LINC01556Q5JQF7 62 aa13.25□□□□□ -0.29
MSLN-205ENST00000563941 C3orf56Q8N813 242 aa13.25□□□□□ -0.29
MSLN-205ENST00000563941 C11orf45Q8TAV5 145 aa13.25□□□□□ -0.29
MSLN-205ENST00000563941 C2orf48Q96LS8 159 aa13.25□□□□□ -0.29
MSLN-205ENST00000563941 LAMTOR3Q9UHA4 124 aa13.25□□□□□ -0.29
MSLN-205ENST00000563941 C3orf22Q8N5N4 141 aa13.24□□□□□ -0.29
MSLN-205ENST00000563941 NDUFC2-KCTD14E9PQ53 114 aa13.24□□□□□ -0.29
MSLN-205ENST00000563941 ATOX1O00244 68 aa13.24□□□□□ -0.29
MSLN-205ENST00000563941 MAST4O15021 2626 aa13.23□□□□□ -0.29
MSLN-205ENST00000563941 IGKV2D-24A0A075B6R9 120 aa13.23□□□□□ -0.29
MSLN-205ENST00000563941 A0A087WVE0 104 aa13.23□□□□□ -0.29
MSLN-205ENST00000563941 UQCRQO14949 82 aa13.23□□□□□ -0.29
MSLN-205ENST00000563941 Q6ZQT0 140 aa13.23□□□□□ -0.29
MSLN-205ENST00000563941 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
MSLN-205ENST00000563941 COX7BP24311 80 aa13.22□□□□□ -0.29
MSLN-205ENST00000563941 CMYA5Q8N3K9 4069 aa13.22□□□□□ -0.29
MSLN-205ENST00000563941 LOC110117498A0A087WWA1 95 aa13.22□□□□□ -0.29
MSLN-205ENST00000563941 H3BQ85 93 aa13.21□□□□□ -0.29
MSLN-205ENST00000563941 M0R378 163 aa13.21□□□□□ -0.29
MSLN-205ENST00000563941 ELOF1P60002 83 aaKnown RBP13.21□□□□□ -0.29
MSLN-205ENST00000563941 ANK2Q01484 3957 aa13.21□□□□□ -0.29
MSLN-205ENST00000563941 TENM3Q9P273 2699 aa13.21□□□□□ -0.3
MSLN-205ENST00000563941 C9orf153Q5TBE3 101 aa13.2□□□□□ -0.3
MSLN-205ENST00000563941 ATP5EP2Q5VTU8 51 aa13.2□□□□□ -0.3
MSLN-205ENST00000563941 TRBV7-6A0A0J9YX20 115 aa13.19□□□□□ -0.3
MSLN-205ENST00000563941 COX7CP15954 63 aa13.19□□□□□ -0.3
MSLN-205ENST00000563941 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.19□□□□□ -0.3
MSLN-205ENST00000563941 UBL5Q9BZL1 73 aa13.19□□□□□ -0.3
MSLN-205ENST00000563941 Q6ZRP5 223 aa13.18□□□□□ -0.3
MSLN-205ENST00000563941 DSCR8Q96T75 97 aa13.17□□□□□ -0.3
MSLN-205ENST00000563941 F8WDY8 70 aa13.16□□□□□ -0.3
MSLN-205ENST00000563941 SYCNQ0VAF6 134 aa13.16□□□□□ -0.3
MSLN-205ENST00000563941 M0R2N4 97 aa13.15□□□□□ -0.3
MSLN-205ENST00000563941 COL6A5A8TX70 2615 aa13.15□□□□□ -0.3
MSLN-205ENST00000563941 DNAH10OSP0CZ25 163 aa13.15□□□□□ -0.3
MSLN-205ENST00000563941 USP17L23D6RBM5 183 aa13.14□□□□□ -0.31
MSLN-205ENST00000563941 DNAH3Q8TD57 4116 aa13.12□□□□□ -0.31
MSLN-205ENST00000563941 GHRHP01286 108 aa13.12□□□□□ -0.31
MSLN-205ENST00000563941 PDE6GP18545 87 aa13.12□□□□□ -0.31
MSLN-205ENST00000563941 LINC00528Q8N1L1 170 aa13.12□□□□□ -0.31
MSLN-205ENST00000563941 FAM19A1Q7Z5A9 133 aa13.11□□□□□ -0.31
MSLN-205ENST00000563941 TRAV10A0A0B4J240 114 aa13.09□□□□□ -0.31
MSLN-205ENST00000563941 SERP2Q8N6R1 65 aa13.09□□□□□ -0.31
MSLN-205ENST00000563941 CRYGAP11844 174 aa13.08□□□□□ -0.32
MSLN-205ENST00000563941 TRBV7-4A0A0J9YYF1 115 aa13.07□□□□□ -0.32
MSLN-205ENST00000563941 LINC00588Q9Y4M8 146 aa13.07□□□□□ -0.32
MSLN-205ENST00000563941 Q6ZVQ6 151 aa13.07□□□□□ -0.32
MSLN-205ENST00000563941 SVIPQ8NHG7 77 aa13.07□□□□□ -0.32
MSLN-205ENST00000563941 NKAPP1Q8N9T2 125 aa13.06□□□□□ -0.32
MSLN-205ENST00000563941 UPK3BQ9BT76 320 aa13.06□□□□□ -0.32
MSLN-205ENST00000563941 NOTCH1P46531 2555 aa13.06□□□□□ -0.32
MSLN-205ENST00000563941 PRB2P02812 416 aaPredicted RBP13.06□□□□□ -0.32
MSLN-205ENST00000563941 SERTAD4-AS1Q5TG53 156 aa13.06□□□□□ -0.32
MSLN-205ENST00000563941 LINC01547P58512 204 aaPredicted RBP13.04□□□□□ -0.32
MSLN-205ENST00000563941 C7orf33Q8WU49 177 aa13.03□□□□□ -0.32
MSLN-205ENST00000563941 KCNQ1DNQ9H478 68 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms