RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PRSS2P07478 247 aa3.89□□□□□ -1.79
CNOT1-204ENST00000563130 CXCL5P42830 114 aa3.89□□□□□ -1.79
CNOT1-204ENST00000563130 Q6ZRP5 223 aa3.89□□□□□ -1.79
CNOT1-204ENST00000563130 STPG4Q8N801 248 aa3.89□□□□□ -1.79
CNOT1-204ENST00000563130 TOMM7Q9P0U1 55 aa3.89□□□□□ -1.79
CNOT1-204ENST00000563130 F8VRH5 84 aa3.88□□□□□ -1.79
CNOT1-204ENST00000563130 SPINK8P0C7L1 97 aa3.88□□□□□ -1.79
CNOT1-204ENST00000563130 CKS1BP61024 79 aa3.88□□□□□ -1.79
CNOT1-204ENST00000563130 COX7B2Q8TF08 81 aa3.88□□□□□ -1.79
CNOT1-204ENST00000563130 DPH3Q96FX2 82 aa3.88□□□□□ -1.79
CNOT1-204ENST00000563130 NDUFC2-KCTD14E9PQ53 114 aa3.88□□□□□ -1.79
CNOT1-204ENST00000563130 RPL18AQ02543 176 aaKnown RBP3.88□□□□□ -1.79
CNOT1-204ENST00000563130 C9orf116Q5BN46 136 aaPredicted RBP3.88□□□□□ -1.79
CNOT1-204ENST00000563130 COA6Q5JTJ3 125 aaKnown RBP3.88□□□□□ -1.79
CNOT1-204ENST00000563130 SRRM2Q9UQ35 2752 aaKnown RBP3.87□□□□□ -1.79
CNOT1-204ENST00000563130 A0A1W2PNN7 141 aa3.87□□□□□ -1.79
CNOT1-204ENST00000563130 VAMP3Q15836 100 aa3.87□□□□□ -1.79
CNOT1-204ENST00000563130 TMEM170BQ5T4T1 132 aa3.87□□□□□ -1.79
CNOT1-204ENST00000563130 KRTAP7-1Q8IUC3 87 aa3.87□□□□□ -1.79
CNOT1-204ENST00000563130 HSPB8Q9UJY1 196 aa3.87□□□□□ -1.79
CNOT1-204ENST00000563130 TMEM223A0PJW6 202 aa3.86□□□□□ -1.79
CNOT1-204ENST00000563130 INAFM2P0DMQ5 153 aa3.86□□□□□ -1.79
CNOT1-204ENST00000563130 FABP4P15090 132 aa3.86□□□□□ -1.79
CNOT1-204ENST00000563130 C9orf129Q5T035 196 aaKnown RBP3.86□□□□□ -1.79
CNOT1-204ENST00000563130 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
CNOT1-204ENST00000563130 LOC105371267A0A1B0GV96 52 aa3.86□□□□□ -1.79
CNOT1-204ENST00000563130 RPL37AP61513 92 aaKnown RBP3.86□□□□□ -1.79
CNOT1-204ENST00000563130 FAM168BA1KXE4 195 aa3.85□□□□□ -1.79
CNOT1-204ENST00000563130 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
CNOT1-204ENST00000563130 HNRNPA3P51991 378 aaKnown RBP3.84□□□□□ -1.79
CNOT1-204ENST00000563130 C7orf33Q8WU49 177 aa3.84□□□□□ -1.79
CNOT1-204ENST00000563130 FLG2Q5D862 2391 aaPredicted RBP3.84□□□□□ -1.79
CNOT1-204ENST00000563130 PLNP26678 52 aa3.84□□□□□ -1.79
CNOT1-204ENST00000563130 SFTA2Q6UW10 78 aa3.84□□□□□ -1.79
CNOT1-204ENST00000563130 MAP1LC3CQ9BXW4 147 aa3.84□□□□□ -1.79
CNOT1-204ENST00000563130 SYS1-DBNDD2H3BUS1 97 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 PRR3P79522 188 aaKnown RBP3.83□□□□□ -1.8
CNOT1-204ENST00000563130 Q75L30 129 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 PHF5AQ7RTV0 110 aaKnown RBP3.83□□□□□ -1.8
CNOT1-204ENST00000563130 XAGE1AQ9HD64 81 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 PKHD1L1Q86WI1 4243 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 DPM2O94777 84 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 IGKCP01834 107 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 S100A12P80511 92 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 COX17Q14061 63 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 LINC01545Q5VT33 79 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 PMCHL2Q9BQD1 86 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 ERG28Q9UKR5 140 aa3.83□□□□□ -1.8
CNOT1-204ENST00000563130 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
CNOT1-204ENST00000563130 FAM19A5Q7Z5A7 132 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-204ENST00000563130 KRTAP11-1Q8IUC1 163 aa3.82□□□□□ -1.8
CNOT1-204ENST00000563130 M0QXV9 152 aa3.82□□□□□ -1.8
CNOT1-204ENST00000563130 C3orf79P0CE67 100 aa3.82□□□□□ -1.8
CNOT1-204ENST00000563130 TSPEAR-AS2P59090 65 aa3.82□□□□□ -1.8
CNOT1-204ENST00000563130 C5orf47Q569G3 176 aa3.82□□□□□ -1.8
CNOT1-204ENST00000563130 BOD1L2Q8IYS8 172 aa3.82□□□□□ -1.8
CNOT1-204ENST00000563130 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
CNOT1-204ENST00000563130 PFN2P35080 140 aa3.81□□□□□ -1.8
CNOT1-204ENST00000563130 SRSF9Q13242 221 aaKnown RBP eCLIP3.81□□□□□ -1.8
CNOT1-204ENST00000563130 TP73-AS1Q9UF72 201 aa3.81□□□□□ -1.8
CNOT1-204ENST00000563130 PSORS1C2Q9UIG4 136 aa3.81□□□□□ -1.8
CNOT1-204ENST00000563130 IGLV5-37A0A075B6J1 123 aa3.81□□□□□ -1.8
CNOT1-204ENST00000563130 LEPROTO15243 131 aa3.81□□□□□ -1.8
CNOT1-204ENST00000563130 RPL13AP40429 203 aaKnown RBP3.81□□□□□ -1.8
CNOT1-204ENST00000563130 SND1-IT1Q9HBX3 110 aa3.81□□□□□ -1.8
CNOT1-204ENST00000563130 NDUFA12Q9UI09 145 aa3.81□□□□□ -1.8
CNOT1-204ENST00000563130 C22orf24Q9Y442 160 aa3.81□□□□□ -1.8
CNOT1-204ENST00000563130 KRTAP29-1A8MX34 341 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-204ENST00000563130 J3QQQ9 107 aa3.8□□□□□ -1.8
CNOT1-204ENST00000563130 TSPAN13O95857 204 aa3.8□□□□□ -1.8
CNOT1-204ENST00000563130 PLEKHB2Q96CS7 222 aa3.8□□□□□ -1.8
CNOT1-204ENST00000563130 MYMXA0A1B0GTQ4 84 aa3.79□□□□□ -1.8
CNOT1-204ENST00000563130 E9PLD3 99 aa3.79□□□□□ -1.8
CNOT1-204ENST00000563130 HERVK_113P61574 105 aa3.79□□□□□ -1.8
CNOT1-204ENST00000563130 HIST3H2BBQ8N257 126 aa3.79□□□□□ -1.8
CNOT1-204ENST00000563130 NMUP48645 174 aa3.79□□□□□ -1.8
CNOT1-204ENST00000563130 SPINK6Q6UWN8 80 aa3.79□□□□□ -1.8
CNOT1-204ENST00000563130 MRPL55Q7Z7F7 128 aaKnown RBP3.79□□□□□ -1.8
CNOT1-204ENST00000563130 Q8NDZ9 215 aa3.79□□□□□ -1.8
CNOT1-204ENST00000563130 LINC00587B1AMM8 73 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 OXTP01178 125 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 SMIM13P0DJ93 91 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 LINC00158P58513 81 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 KRTDAPP60985 99 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 C1orf137Q5JT78 98 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 LINC00518Q8N0U6 118 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 HERC1Q15751 4861 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 LOC107984156A0A0G2JMH3 177 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 IGLV7-43P04211 117 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 UBE2BP63146 152 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 MEIG1Q5JSS6 88 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 ARL17AQ8IVW1 177 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 MIR7-3HGQ8N6C7 128 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 LINC00167Q96N53 147 aa3.78□□□□□ -1.8
CNOT1-204ENST00000563130 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
CNOT1-204ENST00000563130 PRR26Q8N8Z3 221 aa3.77□□□□□ -1.81
CNOT1-204ENST00000563130 IGKV2D-26A0A0A0MRZ7 120 aa3.77□□□□□ -1.81
CNOT1-204ENST00000563130 C20orf202A1L168 122 aa3.77□□□□□ -1.81
CNOT1-204ENST00000563130 SEC61BP60468 96 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms