RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 REG3GQ6UW15 175 aa10.13□□□□□ -0.79
CDT1-202ENST00000562747 PMCHL2Q9BQD1 86 aa10.13□□□□□ -0.79
CDT1-202ENST00000562747 SND1-IT1Q9HBX3 110 aa10.13□□□□□ -0.79
CDT1-202ENST00000562747 LEPROTO15243 131 aa10.12□□□□□ -0.79
CDT1-202ENST00000562747 ATP6V1G1O75348 118 aa10.12□□□□□ -0.79
CDT1-202ENST00000562747 HERVK_113P61574 105 aa10.12□□□□□ -0.79
CDT1-202ENST00000562747 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
CDT1-202ENST00000562747 NDUFA12Q9UI09 145 aa10.12□□□□□ -0.79
CDT1-202ENST00000562747 SYS1-DBNDD2H3BUS1 97 aa10.11□□□□□ -0.79
CDT1-202ENST00000562747 LINC00158P58513 81 aa10.11□□□□□ -0.79
CDT1-202ENST00000562747 NKAPP1Q8N9T2 125 aa10.11□□□□□ -0.79
CDT1-202ENST00000562747 MYMXA0A1B0GTQ4 84 aa10.1□□□□□ -0.79
CDT1-202ENST00000562747 LINC00587B1AMM8 73 aa10.1□□□□□ -0.79
CDT1-202ENST00000562747 LINC01600Q96MT4 127 aa10.1□□□□□ -0.79
CDT1-202ENST00000562747 LINC00167Q96N53 147 aa10.1□□□□□ -0.79
CDT1-202ENST00000562747 RPL24P83731 157 aaKnown RBP10.09□□□□□ -0.79
CDT1-202ENST00000562747 MEIG1Q5JSS6 88 aa10.09□□□□□ -0.79
CDT1-202ENST00000562747 J3QQQ9 107 aa10.08□□□□□ -0.8
CDT1-202ENST00000562747 VPREB1P12018 145 aa10.08□□□□□ -0.8
CDT1-202ENST00000562747 TSPEAR-AS2P59090 65 aa10.08□□□□□ -0.8
CDT1-202ENST00000562747 LINC01545Q5VT33 79 aa10.08□□□□□ -0.8
CDT1-202ENST00000562747 PET117Q6UWS5 81 aa10.08□□□□□ -0.8
CDT1-202ENST00000562747 DIRC1Q969H9 104 aa10.08□□□□□ -0.8
CDT1-202ENST00000562747 SMIM13P0DJ93 91 aa10.07□□□□□ -0.8
CDT1-202ENST00000562747 NMUP48645 174 aa10.07□□□□□ -0.8
CDT1-202ENST00000562747 A0A0U1RRA0 63 aa10.06□□□□□ -0.8
CDT1-202ENST00000562747 RPL37AP8A6NKH3 93 aa10.06□□□□□ -0.8
CDT1-202ENST00000562747 GAGE10A6NGK3 116 aa10.05□□□□□ -0.8
CDT1-202ENST00000562747 E9PLD3 99 aa10.05□□□□□ -0.8
CDT1-202ENST00000562747 H0Y9J4 135 aa10.05□□□□□ -0.8
CDT1-202ENST00000562747 C3orf79P0CE67 100 aa10.05□□□□□ -0.8
CDT1-202ENST00000562747 LGALS3P17931 250 aaKnown RBP10.05□□□□□ -0.8
CDT1-202ENST00000562747 BCE1O60756 84 aa10.04□□□□□ -0.8
CDT1-202ENST00000562747 MIR7-3HGQ8N6C7 128 aa10.04□□□□□ -0.8
CDT1-202ENST00000562747 ZNF861PO60384 105 aa10.03□□□□□ -0.8
CDT1-202ENST00000562747 Q8NDZ9 215 aa10.02□□□□□ -0.81
CDT1-202ENST00000562747 IGLV1-50A0A075B6I6 118 aa10.01□□□□□ -0.81
CDT1-202ENST00000562747 KRTDAPP60985 99 aa10.01□□□□□ -0.81
CDT1-202ENST00000562747 IGKV2-28A0A075B6P5 120 aa10□□□□□ -0.81
CDT1-202ENST00000562747 IGKV2D-28P01615 120 aa10□□□□□ -0.81
CDT1-202ENST00000562747 RPL28P46779 137 aaKnown RBP10□□□□□ -0.81
CDT1-202ENST00000562747 KRTAP10-8P60410 259 aa10□□□□□ -0.81
CDT1-202ENST00000562747 C20orf202A1L168 122 aa9.99□□□□□ -0.81
CDT1-202ENST00000562747 BOD1L2Q8IYS8 172 aa9.99□□□□□ -0.81
CDT1-202ENST00000562747 LOC107984156A0A0G2JMH3 177 aa9.98□□□□□ -0.81
CDT1-202ENST00000562747 M0R378 163 aa9.98□□□□□ -0.81
CDT1-202ENST00000562747 ARL17AQ8IVW1 177 aa9.98□□□□□ -0.81
CDT1-202ENST00000562747 IGKV2D-26A0A0A0MRZ7 120 aa9.97□□□□□ -0.81
CDT1-202ENST00000562747 A0A0J9YXY3 114 aa9.96□□□□□ -0.82
CDT1-202ENST00000562747 AKR1D1P51857 326 aa9.96□□□□□ -0.82
CDT1-202ENST00000562747 DAND5Q8N907 189 aa9.96□□□□□ -0.82
CDT1-202ENST00000562747 TMEM126AQ9H061 195 aa9.96□□□□□ -0.82
CDT1-202ENST00000562747 KRTAP1-4P0C5Y4 121 aa9.95□□□□□ -0.82
CDT1-202ENST00000562747 UBE2AP49459 152 aa9.95□□□□□ -0.82
CDT1-202ENST00000562747 KRTAP13-1Q8IUC0 172 aa9.95□□□□□ -0.82
CDT1-202ENST00000562747 HIST3H2BBQ8N257 126 aa9.95□□□□□ -0.82
CDT1-202ENST00000562747 LPAP08519 4548 aa9.95□□□□□ -0.82
CDT1-202ENST00000562747 TMEM238C9JI98 176 aa9.94□□□□□ -0.82
CDT1-202ENST00000562747 S100A2P29034 98 aa9.94□□□□□ -0.82
CDT1-202ENST00000562747 MIEN1Q9BRT3 115 aa9.94□□□□□ -0.82
CDT1-202ENST00000562747 NCR3O14931 201 aa9.93□□□□□ -0.82
CDT1-202ENST00000562747 S100A6P06703 90 aa9.93□□□□□ -0.82
CDT1-202ENST00000562747 FAM19A1Q7Z5A9 133 aa9.92□□□□□ -0.82
CDT1-202ENST00000562747 HIST1H2BLQ99880 126 aa9.92□□□□□ -0.82
CDT1-202ENST00000562747 TRBV10-2A0A0K0K1G8 114 aa9.91□□□□□ -0.82
CDT1-202ENST00000562747 ZNF815PA8K554 130 aa9.91□□□□□ -0.82
CDT1-202ENST00000562747 TIMM17BO60830 172 aa9.91□□□□□ -0.82
CDT1-202ENST00000562747 NDUFC2O95298 119 aa9.91□□□□□ -0.82
CDT1-202ENST00000562747 PRR26Q8N8Z3 221 aa9.91□□□□□ -0.82
CDT1-202ENST00000562747 PRYO14603 147 aa9.9□□□□□ -0.82
CDT1-202ENST00000562747 ADAMTSL4-AS1Q5T5F5 129 aa9.9□□□□□ -0.82
CDT1-202ENST00000562747 PRLHP81277 87 aa9.89□□□□□ -0.83
CDT1-202ENST00000562747 KCNQ1DNQ9H478 68 aa9.89□□□□□ -0.83
CDT1-202ENST00000562747 SPANXB1Q9NS25 103 aaPredicted RBP9.89□□□□□ -0.83
CDT1-202ENST00000562747 RPL13AP40429 203 aaKnown RBP9.88□□□□□ -0.83
CDT1-202ENST00000562747 S100A12P80511 92 aa9.88□□□□□ -0.83
CDT1-202ENST00000562747 SOSTDC1Q6X4U4 206 aa9.88□□□□□ -0.83
CDT1-202ENST00000562747 ATOH7Q8N100 152 aa9.88□□□□□ -0.83
CDT1-202ENST00000562747 LITAFQ99732 161 aa9.88□□□□□ -0.83
CDT1-202ENST00000562747 TTTY13Q9BZ97 58 aa9.88□□□□□ -0.83
CDT1-202ENST00000562747 TRBV10-3A0A0K0K1G6 114 aa9.87□□□□□ -0.83
CDT1-202ENST00000562747 SPRR1AP35321 89 aa9.87□□□□□ -0.83
CDT1-202ENST00000562747 SNRPEP62304 92 aaKnown RBP9.87□□□□□ -0.83
CDT1-202ENST00000562747 ANKRD39Q53RE8 183 aa9.87□□□□□ -0.83
CDT1-202ENST00000562747 DDTP30046 118 aa9.86□□□□□ -0.83
CDT1-202ENST00000562747 NPC2P61916 151 aa9.86□□□□□ -0.83
CDT1-202ENST00000562747 LINC00337Q8N6G1 96 aa9.86□□□□□ -0.83
CDT1-202ENST00000562747 EIF4EBP3O60516 100 aaPredicted RBP9.85□□□□□ -0.83
CDT1-202ENST00000562747 LINC00308Q8TCZ7 52 aa9.85□□□□□ -0.83
CDT1-202ENST00000562747 C5orf52A6NGY3 159 aa9.83□□□□□ -0.84
CDT1-202ENST00000562747 KRTAP4-16G5E9R7 235 aaPredicted RBP9.83□□□□□ -0.84
CDT1-202ENST00000562747 S100A7L2Q5SY68 101 aa9.83□□□□□ -0.84
CDT1-202ENST00000562747 SCGB1D4Q6XE38 83 aa9.83□□□□□ -0.84
CDT1-202ENST00000562747 SPANXCQ9NY87 97 aa9.83□□□□□ -0.84
CDT1-202ENST00000562747 ETDCA0A1B0GVM5 59 aa9.82□□□□□ -0.84
CDT1-202ENST00000562747 IGLV6-57P01721 117 aa9.82□□□□□ -0.84
CDT1-202ENST00000562747 CRYGAP11844 174 aa9.82□□□□□ -0.84
CDT1-202ENST00000562747 HIGD2AQ9BW72 106 aa9.82□□□□□ -0.84
CDT1-202ENST00000562747 FAM229BQ4G0N7 80 aa9.81□□□□□ -0.84
CDT1-202ENST00000562747 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms