RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
HERC1-214ENST00000561400 H7C2G1 150 aa7.99□□□□□ -1.13
HERC1-214ENST00000561400 ESRGQ1W209 222 aa7.99□□□□□ -1.13
HERC1-214ENST00000561400 SDHAF1A6NFY7 115 aa7.99□□□□□ -1.13
HERC1-214ENST00000561400 DEFB104AQ8WTQ1 72 aa7.99□□□□□ -1.13
HERC1-214ENST00000561400 COX6CP09669 75 aa7.98□□□□□ -1.13
HERC1-214ENST00000561400 POLR2KP53803 58 aaKnown RBP7.98□□□□□ -1.13
HERC1-214ENST00000561400 SUMO2P61956 95 aaKnown RBP7.98□□□□□ -1.13
HERC1-214ENST00000561400 PPP1R17O96001 155 aa7.98□□□□□ -1.13
HERC1-214ENST00000561400 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
HERC1-214ENST00000561400 IBA57-AS1B1ANH7 110 aa7.97□□□□□ -1.13
HERC1-214ENST00000561400 SERTAD4-AS1Q5TG53 156 aa7.97□□□□□ -1.13
HERC1-214ENST00000561400 MPLKIPQ8TAP9 179 aa7.97□□□□□ -1.13
HERC1-214ENST00000561400 A0A087WVE0 104 aa7.97□□□□□ -1.13
HERC1-214ENST00000561400 GHRHP01286 108 aa7.97□□□□□ -1.13
HERC1-214ENST00000561400 NTM-AS1Q6ZSK4 140 aa7.97□□□□□ -1.13
HERC1-214ENST00000561400 UBE2D4Q9Y2X8 147 aa7.97□□□□□ -1.13
HERC1-214ENST00000561400 LINC00588Q9Y4M8 146 aa7.97□□□□□ -1.13
HERC1-214ENST00000561400 TRBV27A0A0K0K1C4 114 aa7.96□□□□□ -1.14
HERC1-214ENST00000561400 CCL18P55774 89 aa7.95□□□□□ -1.14
HERC1-214ENST00000561400 M0R378 163 aa7.95□□□□□ -1.14
HERC1-214ENST00000561400 SMIM2Q9BVW6 85 aa7.95□□□□□ -1.14
HERC1-214ENST00000561400 VPS13DQ5THJ4 4388 aa7.95□□□□□ -1.14
HERC1-214ENST00000561400 IGLV2-18A0A075B6J9 118 aa7.94□□□□□ -1.14
HERC1-214ENST00000561400 I3L3M4 83 aa7.94□□□□□ -1.14
HERC1-214ENST00000561400 VCYO14598 125 aa7.94□□□□□ -1.14
HERC1-214ENST00000561400 DNAH1Q9P2D7 4330 aa7.94□□□□□ -1.14
HERC1-214ENST00000561400 TRBV6-8A0A0A6YYG3 113 aa7.94□□□□□ -1.14
HERC1-214ENST00000561400 TSHBP01222 138 aa7.94□□□□□ -1.14
HERC1-214ENST00000561400 LELP1Q5T871 98 aa7.94□□□□□ -1.14
HERC1-214ENST00000561400 S100A7L2Q5SY68 101 aa7.93□□□□□ -1.14
HERC1-214ENST00000561400 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
HERC1-214ENST00000561400 IGKV3D-7A0A0C4DH55 119 aa7.93□□□□□ -1.14
HERC1-214ENST00000561400 INAFM2P0DMQ5 153 aa7.93□□□□□ -1.14
HERC1-214ENST00000561400 NDUFC1O43677 76 aa7.92□□□□□ -1.14
HERC1-214ENST00000561400 FAM229BQ4G0N7 80 aa7.92□□□□□ -1.14
HERC1-214ENST00000561400 WFDC10BQ8IUB3 73 aa7.92□□□□□ -1.14
HERC1-214ENST00000561400 UBE2DNLQ8IWF7 75 aa7.92□□□□□ -1.14
HERC1-214ENST00000561400 CLEC2BQ92478 149 aa7.92□□□□□ -1.14
HERC1-214ENST00000561400 TRAV8-3A0A0A6YYJ7 113 aa7.91□□□□□ -1.14
HERC1-214ENST00000561400 BCE1O60756 84 aa7.91□□□□□ -1.14
HERC1-214ENST00000561400 LINC00476Q8WZB0 136 aa7.91□□□□□ -1.14
HERC1-214ENST00000561400 LAGE3Q14657 143 aa7.91□□□□□ -1.14
HERC1-214ENST00000561400 SOSTDC1Q6X4U4 206 aa7.91□□□□□ -1.14
HERC1-214ENST00000561400 ALMS1Q8TCU4 4167 aa7.9□□□□□ -1.14
HERC1-214ENST00000561400 LY6G6CO95867 125 aa7.9□□□□□ -1.14
HERC1-214ENST00000561400 CHCHD7Q9BUK0 85 aa7.9□□□□□ -1.14
HERC1-214ENST00000561400 KMT2AQ03164 3969 aa7.9□□□□□ -1.15
HERC1-214ENST00000561400 F8WEM9 126 aa7.9□□□□□ -1.15
HERC1-214ENST00000561400 Q8N3U1 123 aa7.9□□□□□ -1.15
HERC1-214ENST00000561400 NDUFS5O43920 106 aa7.89□□□□□ -1.15
HERC1-214ENST00000561400 Q9H8V8 135 aa7.89□□□□□ -1.15
HERC1-214ENST00000561400 MUSTN1Q8IVN3 82 aa7.88□□□□□ -1.15
HERC1-214ENST00000561400 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.88□□□□□ -1.15
HERC1-214ENST00000561400 IGKV2-29A2NJV5 120 aaPredicted RBP7.88□□□□□ -1.15
HERC1-214ENST00000561400 AMELXQ99217 191 aa7.88□□□□□ -1.15
HERC1-214ENST00000561400 TRAV7A0A075B6U4 112 aa7.87□□□□□ -1.15
HERC1-214ENST00000561400 ZNF73O43830 326 aaPredicted RBP7.87□□□□□ -1.15
HERC1-214ENST00000561400 TIMM17AQ99595 171 aa7.87□□□□□ -1.15
HERC1-214ENST00000561400 SACSQ9NZJ4 4579 aa7.87□□□□□ -1.15
HERC1-214ENST00000561400 KMT2CQ8NEZ4 4911 aaKnown RBP7.87□□□□□ -1.15
HERC1-214ENST00000561400 DNAH10OSP0CZ25 163 aa7.87□□□□□ -1.15
HERC1-214ENST00000561400 TMEM256-PLSCR3K7ERE1 68 aa7.86□□□□□ -1.15
HERC1-214ENST00000561400 RPL39P62891 51 aaKnown RBP7.86□□□□□ -1.15
HERC1-214ENST00000561400 C20orf203Q8NBC4 194 aa7.86□□□□□ -1.15
HERC1-214ENST00000561400 IGHV3-30-3P0DP02 117 aa7.86□□□□□ -1.15
HERC1-214ENST00000561400 LINC01556Q5JQF7 62 aa7.86□□□□□ -1.15
HERC1-214ENST00000561400 ADAMTSL4-AS1Q5T5F5 129 aa7.86□□□□□ -1.15
HERC1-214ENST00000561400 Q6ZVQ6 151 aa7.86□□□□□ -1.15
HERC1-214ENST00000561400 HYDINQ4G0P3 5121 aa7.86□□□□□ -1.15
HERC1-214ENST00000561400 LCE6AA0A183 80 aa7.85□□□□□ -1.15
HERC1-214ENST00000561400 UBE2L6O14933 153 aa7.85□□□□□ -1.15
HERC1-214ENST00000561400 RPL28P46779 137 aaKnown RBP7.85□□□□□ -1.15
HERC1-214ENST00000561400 PAPPA-AS1Q5QFB9 102 aa7.85□□□□□ -1.15
HERC1-214ENST00000561400 KRTAP1-5Q9BYS1 174 aa7.84□□□□□ -1.15
HERC1-214ENST00000561400 IGLV4-60A0A075B6I1 120 aa7.84□□□□□ -1.15
HERC1-214ENST00000561400 TSPEAR-AS2P59090 65 aa7.84□□□□□ -1.15
HERC1-214ENST00000561400 PHF5AQ7RTV0 110 aaKnown RBP7.84□□□□□ -1.15
HERC1-214ENST00000561400 RMI2Q96E14 147 aa7.84□□□□□ -1.15
HERC1-214ENST00000561400 A0A1B0GUV1 79 aa7.83□□□□□ -1.16
HERC1-214ENST00000561400 Q1T7F1 81 aa7.83□□□□□ -1.16
HERC1-214ENST00000561400 C2orf66Q6UXQ4 117 aa7.83□□□□□ -1.16
HERC1-214ENST00000561400 SCGB3A1Q96QR1 104 aa7.83□□□□□ -1.16
HERC1-214ENST00000561400 TRAV23DV6A0A075B6W5 121 aa7.83□□□□□ -1.16
HERC1-214ENST00000561400 DNAL4O96015 105 aa7.83□□□□□ -1.16
HERC1-214ENST00000561400 TOMM6Q96B49 74 aa7.83□□□□□ -1.16
HERC1-214ENST00000561400 DNAH6Q9C0G6 4158 aa7.82□□□□□ -1.16
HERC1-214ENST00000561400 NBDYA0A0U1RRE5 68 aa7.82□□□□□ -1.16
HERC1-214ENST00000561400 M0R2N4 97 aa7.82□□□□□ -1.16
HERC1-214ENST00000561400 ATP5EP2Q5VTU8 51 aa7.82□□□□□ -1.16
HERC1-214ENST00000561400 LINC00846Q9NV44 126 aa7.82□□□□□ -1.16
HERC1-214ENST00000561400 KLK12Q9UKR0 248 aa7.82□□□□□ -1.16
HERC1-214ENST00000561400 C22orf24Q9Y442 160 aa7.82□□□□□ -1.16
HERC1-214ENST00000561400 FAM104AQ969W3 186 aa7.82□□□□□ -1.16
HERC1-214ENST00000561400 A0A087WZ39 114 aa7.81□□□□□ -1.16
HERC1-214ENST00000561400 ANGP03950 147 aaKnown RBP7.81□□□□□ -1.16
HERC1-214ENST00000561400 OPRPNQ99935 248 aaPredicted RBP7.81□□□□□ -1.16
HERC1-214ENST00000561400 Q6ZR54 194 aa7.8□□□□□ -1.16
HERC1-214ENST00000561400 SNURFQ9Y675 71 aa7.8□□□□□ -1.16
HERC1-214ENST00000561400 BAALC-AS2P0C853 105 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms