RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 CFAP47Q6ZTR5 3102 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 ANAPC1Q9H1A4 1944 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 INE1O15225 51 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 LINC00315P59091 139 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 CNBPP62633 177 aaKnown RBP1.14□□□□□ -2.23
KTN1-224ENST00000556631 TFF3Q07654 80 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 C9orf163Q8N9P6 203 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 LINC00304Q8N9R0 145 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 MRPL34Q9BQ48 92 aaKnown RBP1.14□□□□□ -2.23
KTN1-224ENST00000556631 PRO2289Q9P1D8 64 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 PTPRZ1P23471 2315 aaPredicted RBP1.14□□□□□ -2.23
KTN1-224ENST00000556631 RALGAPA2Q2PPJ7 1873 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 DOCK11Q5JSL3 2073 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 LTBP2Q14767 1821 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 ZFC3H1O60293 1989 aaKnown RBP1.13□□□□□ -2.23
KTN1-224ENST00000556631 TANC2Q9HCD6 1990 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 TET1Q8NFU7 2136 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 BRWD1Q9NSI6 2320 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 MYH1P12882 1939 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 TNCP24821 2201 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 PANO1I0J062 215 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 Q5W150 140 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 KRTAP9-3Q9BYQ3 159 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 CACNA1BQ00975 2339 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 HELZP42694 1942 aaKnown RBP1.13□□□□□ -2.23
KTN1-224ENST00000556631 MT3P25713 68 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 HCP5Q6MZN7 132 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 ALPK3Q96L96 1907 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 MYH4Q9Y623 1939 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 FREM1Q5H8C1 2179 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 SPATA8Q6RVD6 105 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 CCDC88AQ3V6T2 1871 aa1.13□□□□□ -2.23
KTN1-224ENST00000556631 FBN1P35555 2871 aaKnown RBP1.13□□□□□ -2.23
KTN1-224ENST00000556631 PRRC2AP48634 2157 aaKnown RBP1.13□□□□□ -2.23
KTN1-224ENST00000556631 MED13LQ71F56 2210 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 COX6B2Q6YFQ2 88 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 AKAP11Q9UKA4 1901 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 TP53BP1Q12888 1972 aaPredicted RBP1.12□□□□□ -2.23
KTN1-224ENST00000556631 OBSL1O75147 1896 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 TICRRQ7Z2Z1 1910 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 UBR2Q8IWV8 1755 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 SPINK9Q5DT21 86 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 COL4A5P29400 1685 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 SPINK1P00995 79 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 SLPIP03973 132 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 DSCAMO60469 2012 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 BTAF1O14981 1849 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 MYH2Q9UKX2 1941 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 MYH13Q9UKX3 1938 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 PCNX2A6NKB5 2137 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 M0R2N4 97 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 LY6G6CO95867 125 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 PDCD11Q14690 1871 aaKnown RBP1.12□□□□□ -2.23
KTN1-224ENST00000556631 MYLKQ15746 1914 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 PCLOQ9Y6V0 5065 aa1.12□□□□□ -2.23
KTN1-224ENST00000556631 KCNQ1DNQ9H478 68 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 DENND4CQ5VZ89 1909 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 CD163L1Q9NR16 1453 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 ARID2Q68CP9 1835 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 PCDH15Q96QU1 1955 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 PDE4DIPQ5VU43 2346 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 FLG2Q5D862 2391 aaPredicted RBP1.11□□□□□ -2.23
KTN1-224ENST00000556631 HTN1P15515 57 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 CACNA1SQ13698 1873 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 TCF20Q9UGU0 1960 aaKnown RBP1.11□□□□□ -2.23
KTN1-224ENST00000556631 ABCA4P78363 2273 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 MYH3P11055 1940 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 ANKRD36CQ5JPF3 1778 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 TMEM131Q92545 1883 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 CNFNQ9BYD5 112 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 PLXNA3P51805 1871 aa1.11□□□□□ -2.23
KTN1-224ENST00000556631 HEATR5AQ86XA9 2040 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 PRCDQ00LT1 54 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 DEFB109BQ30KR1 87 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 ABCA1O95477 2261 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 TMEM167AQ8TBQ9 72 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 SIP14410 1827 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 GREB1Q4ZG55 1949 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 MALRD1Q5VYJ5 2156 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 NAV1Q8NEY1 1877 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 AKAP9Q99996 3911 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 K7EQZ3 153 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 GIG44P09565 113 aaPredicted RBP1.1□□□□□ -2.23
KTN1-224ENST00000556631 KRTAP15-1Q3LI76 137 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 KRTAP26-1Q6PEX3 210 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 PRR34Q9NV39 138 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 PLXNA2O75051 1894 aa1.1□□□□□ -2.23
KTN1-224ENST00000556631 AGRNO00468 2067 aa1.09□□□□□ -2.23
KTN1-224ENST00000556631 ZNF575Q86XF7 245 aa1.09□□□□□ -2.23
KTN1-224ENST00000556631 ANAPC11Q9NYG5 84 aa1.09□□□□□ -2.23
KTN1-224ENST00000556631 MYH6P13533 1939 aa1.09□□□□□ -2.23
KTN1-224ENST00000556631 A8MU10 97 aa1.09□□□□□ -2.23
KTN1-224ENST00000556631 RPL37P61927 97 aaKnown RBP1.09□□□□□ -2.23
KTN1-224ENST00000556631 DEFB106AQ8N104 65 aa1.09□□□□□ -2.23
KTN1-224ENST00000556631 FRYLO94915 3013 aa1.09□□□□□ -2.23
KTN1-224ENST00000556631 MYH8P13535 1937 aa1.09□□□□□ -2.24
KTN1-224ENST00000556631 ANKRD31Q8N7Z5 1873 aa1.09□□□□□ -2.24
KTN1-224ENST00000556631 COL11A2P13942 1736 aaPredicted RBP1.09□□□□□ -2.24
KTN1-224ENST00000556631 H1FX-AS1Q4G0G2 97 aa1.09□□□□□ -2.24
KTN1-224ENST00000556631 NUP98P52948 1817 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms