RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 GAGE10A6NGK3 116 aa6.98□□□□□ -1.29
SLIRP-206ENST00000556375 ZNF861PO60384 105 aa6.98□□□□□ -1.29
SLIRP-206ENST00000556375 KRTAP10-8P60410 259 aa6.98□□□□□ -1.29
SLIRP-206ENST00000556375 HERV-K104P63124 156 aa6.98□□□□□ -1.29
SLIRP-206ENST00000556375 MAP1LC3CQ9BXW4 147 aa6.98□□□□□ -1.29
SLIRP-206ENST00000556375 NDUFA12Q9UI09 145 aa6.98□□□□□ -1.29
SLIRP-206ENST00000556375 RPL37AP8A6NKH3 93 aa6.97□□□□□ -1.29
SLIRP-206ENST00000556375 BCE1O60756 84 aa6.97□□□□□ -1.29
SLIRP-206ENST00000556375 IGKCP01834 107 aa6.97□□□□□ -1.29
SLIRP-206ENST00000556375 LINC00158P58513 81 aa6.97□□□□□ -1.29
SLIRP-206ENST00000556375 RPL24P83731 157 aaKnown RBP6.97□□□□□ -1.29
SLIRP-206ENST00000556375 PMCHL2Q9BQD1 86 aa6.97□□□□□ -1.29
SLIRP-206ENST00000556375 MYMXA0A1B0GTQ4 84 aa6.96□□□□□ -1.3
SLIRP-206ENST00000556375 LEPROTO15243 131 aa6.96□□□□□ -1.3
SLIRP-206ENST00000556375 TSPEAR-AS2P59090 65 aa6.96□□□□□ -1.3
SLIRP-206ENST00000556375 HERVK_113P61574 105 aa6.96□□□□□ -1.3
SLIRP-206ENST00000556375 MEIG1Q5JSS6 88 aa6.96□□□□□ -1.3
SLIRP-206ENST00000556375 PLEKHB2Q96CS7 222 aa6.96□□□□□ -1.3
SLIRP-206ENST00000556375 IGKV2-28A0A075B6P5 120 aa6.95□□□□□ -1.3
SLIRP-206ENST00000556375 A0A0U1RRA0 63 aa6.95□□□□□ -1.3
SLIRP-206ENST00000556375 LINC00587B1AMM8 73 aa6.95□□□□□ -1.3
SLIRP-206ENST00000556375 IGKV2D-28P01615 120 aa6.95□□□□□ -1.3
SLIRP-206ENST00000556375 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
SLIRP-206ENST00000556375 SMIM13P0DJ93 91 aa6.95□□□□□ -1.3
SLIRP-206ENST00000556375 RPL28P46779 137 aaKnown RBP6.95□□□□□ -1.3
SLIRP-206ENST00000556375 Q8NDZ9 215 aa6.95□□□□□ -1.3
SLIRP-206ENST00000556375 SYS1-DBNDD2H3BUS1 97 aa6.94□□□□□ -1.3
SLIRP-206ENST00000556375 J3QQQ9 107 aa6.94□□□□□ -1.3
SLIRP-206ENST00000556375 ATP6V1G1O75348 118 aa6.94□□□□□ -1.3
SLIRP-206ENST00000556375 COA6Q5JTJ3 125 aaKnown RBP6.94□□□□□ -1.3
SLIRP-206ENST00000556375 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
SLIRP-206ENST00000556375 NMUP48645 174 aa6.93□□□□□ -1.3
SLIRP-206ENST00000556375 MIR7-3HGQ8N6C7 128 aa6.93□□□□□ -1.3
SLIRP-206ENST00000556375 LGALS3P17931 250 aaKnown RBP6.92□□□□□ -1.3
SLIRP-206ENST00000556375 KRTAP13-1Q8IUC0 172 aa6.92□□□□□ -1.3
SLIRP-206ENST00000556375 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
SLIRP-206ENST00000556375 E9PLD3 99 aa6.91□□□□□ -1.3
SLIRP-206ENST00000556375 UBE2AP49459 152 aa6.91□□□□□ -1.3
SLIRP-206ENST00000556375 LINC01545Q5VT33 79 aa6.91□□□□□ -1.3
SLIRP-206ENST00000556375 PET117Q6UWS5 81 aa6.91□□□□□ -1.3
SLIRP-206ENST00000556375 BOD1L2Q8IYS8 172 aa6.91□□□□□ -1.3
SLIRP-206ENST00000556375 TMEM126AQ9H061 195 aa6.91□□□□□ -1.3
SLIRP-206ENST00000556375 TMEM238C9JI98 176 aa6.9□□□□□ -1.3
SLIRP-206ENST00000556375 M0R378 163 aa6.9□□□□□ -1.3
SLIRP-206ENST00000556375 RPL13AP40429 203 aaKnown RBP6.9□□□□□ -1.3
SLIRP-206ENST00000556375 IGKV2D-26A0A0A0MRZ7 120 aa6.89□□□□□ -1.31
SLIRP-206ENST00000556375 S100A1P23297 94 aa6.89□□□□□ -1.31
SLIRP-206ENST00000556375 LOC107984156A0A0G2JMH3 177 aa6.88□□□□□ -1.31
SLIRP-206ENST00000556375 C3orf79P0CE67 100 aa6.88□□□□□ -1.31
SLIRP-206ENST00000556375 PRLHP81277 87 aa6.88□□□□□ -1.31
SLIRP-206ENST00000556375 FAM19A1Q7Z5A9 133 aa6.88□□□□□ -1.31
SLIRP-206ENST00000556375 ARL17AQ8IVW1 177 aa6.88□□□□□ -1.31
SLIRP-206ENST00000556375 DAND5Q8N907 189 aa6.88□□□□□ -1.31
SLIRP-206ENST00000556375 NCR3O14931 201 aa6.87□□□□□ -1.31
SLIRP-206ENST00000556375 A0A0J9YXY3 114 aa6.86□□□□□ -1.31
SLIRP-206ENST00000556375 PRYO14603 147 aa6.86□□□□□ -1.31
SLIRP-206ENST00000556375 KRTDAPP60985 99 aa6.86□□□□□ -1.31
SLIRP-206ENST00000556375 MIEN1Q9BRT3 115 aa6.86□□□□□ -1.31
SLIRP-206ENST00000556375 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
SLIRP-206ENST00000556375 C20orf202A1L168 122 aa6.85□□□□□ -1.31
SLIRP-206ENST00000556375 A0A087X002 238 aa6.84□□□□□ -1.31
SLIRP-206ENST00000556375 TRBV10-2A0A0K0K1G8 114 aa6.84□□□□□ -1.31
SLIRP-206ENST00000556375 SPRR1AP35321 89 aa6.84□□□□□ -1.31
SLIRP-206ENST00000556375 KCNQ1DNQ9H478 68 aa6.84□□□□□ -1.31
SLIRP-206ENST00000556375 SPANXB1Q9NS25 103 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-206ENST00000556375 LRP2P98164 4655 aa6.83□□□□□ -1.32
SLIRP-206ENST00000556375 TRBV10-3A0A0K0K1G6 114 aa6.83□□□□□ -1.32
SLIRP-206ENST00000556375 NDUFC2O95298 119 aa6.83□□□□□ -1.32
SLIRP-206ENST00000556375 CRYGAP11844 174 aa6.83□□□□□ -1.32
SLIRP-206ENST00000556375 FAM229BQ4G0N7 80 aa6.83□□□□□ -1.32
SLIRP-206ENST00000556375 LINC00337Q8N6G1 96 aa6.83□□□□□ -1.32
SLIRP-206ENST00000556375 ZNF815PA8K554 130 aa6.82□□□□□ -1.32
SLIRP-206ENST00000556375 TIMM17BO60830 172 aa6.82□□□□□ -1.32
SLIRP-206ENST00000556375 AKR1D1P51857 326 aa6.82□□□□□ -1.32
SLIRP-206ENST00000556375 S100A12P80511 92 aa6.82□□□□□ -1.32
SLIRP-206ENST00000556375 ADAMTSL4-AS1Q5T5F5 129 aa6.82□□□□□ -1.32
SLIRP-206ENST00000556375 SOSTDC1Q6X4U4 206 aa6.82□□□□□ -1.32
SLIRP-206ENST00000556375 HIGD2AQ9BW72 106 aa6.82□□□□□ -1.32
SLIRP-206ENST00000556375 KRTAP4-16G5E9R7 235 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-206ENST00000556375 DDTP30046 118 aa6.81□□□□□ -1.32
SLIRP-206ENST00000556375 LITAFQ99732 161 aa6.81□□□□□ -1.32
SLIRP-206ENST00000556375 ANAPC11Q9NYG5 84 aa6.81□□□□□ -1.32
SLIRP-206ENST00000556375 ETDCA0A1B0GVM5 59 aa6.8□□□□□ -1.32
SLIRP-206ENST00000556375 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-206ENST00000556375 NPC2P61916 151 aa6.8□□□□□ -1.32
SLIRP-206ENST00000556375 HIST3H2BBQ8N257 126 aa6.8□□□□□ -1.32
SLIRP-206ENST00000556375 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
SLIRP-206ENST00000556375 TTTY13Q9BZ97 58 aa6.8□□□□□ -1.32
SLIRP-206ENST00000556375 IGLV6-57P01721 117 aa6.79□□□□□ -1.32
SLIRP-206ENST00000556375 KRTAP13-2Q52LG2 175 aa6.79□□□□□ -1.32
SLIRP-206ENST00000556375 ZNF706Q9Y5V0 76 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-206ENST00000556375 S100A2P29034 98 aa6.78□□□□□ -1.32
SLIRP-206ENST00000556375 ANKRD39Q53RE8 183 aa6.78□□□□□ -1.32
SLIRP-206ENST00000556375 S100A7L2Q5SY68 101 aa6.78□□□□□ -1.32
SLIRP-206ENST00000556375 ATOH7Q8N100 152 aa6.78□□□□□ -1.32
SLIRP-206ENST00000556375 LINC00308Q8TCZ7 52 aa6.78□□□□□ -1.32
SLIRP-206ENST00000556375 HIST1H2BLQ99880 126 aa6.78□□□□□ -1.32
SLIRP-206ENST00000556375 SPANXCQ9NY87 97 aa6.78□□□□□ -1.32
SLIRP-206ENST00000556375 SPRR4Q96PI1 79 aa6.77□□□□□ -1.33
SLIRP-206ENST00000556375 TRAV23DV6A0A075B6W5 121 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms