RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 NDPQ00604 133 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 WT1-ASQ06250 92 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 PLGLAQ15195 96 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 MRGPRG-AS1Q2M3A8 158 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 DEFB136Q30KP8 78 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 SCGB3A1Q96QR1 104 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 C8orf17Q9NRJ1 99 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 DYNC1H1Q14204 4646 aaKnown RBP1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IGKV2-40A0A087WW87 121 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IGKV2D-26A0A0A0MRZ7 120 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 C19orf71A6NCJ1 209 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 D6R8Y8 96 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IGKV2D-40P01614 121 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IGLV2-23P01705 113 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 TRGV3P03979 118 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 XCL1P47992 114 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 SYCNQ0VAF6 134 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 MRPL51Q4U2R6 128 aaKnown RBP1.85□□□□□ -2.11
PRPF39-206ENST00000554429 C10orf113Q5VZT2 155 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 C20orf197Q8N268 126 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 CSNK1G2-AS1Q8NCQ2 148 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 TXNDC17Q9BRA2 123 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 TENM2Q9NT68 2774 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 A0A1B0GVY2 172 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 SLC25A20O43772 301 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IL4P05112 153 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 PRSS2P07478 247 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 ESRGQ1W209 222 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 TMEM170BQ5T4T1 132 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 LINC00643Q86TS7 51 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 FRAS1Q86XX4 4008 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV3-64A0A075B6Q5 118 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV4-4A0A075B6R2 117 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 C16orf90A8MZG2 172 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 G3V318 75 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 GNRH2O43555 120 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 DEFB114Q30KQ6 69 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 C20orf203Q8NBC4 194 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 ZNF414Q96IQ9 312 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 FAM167A-AS1Q96KT0 104 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 OCR1Q9BZK8 76 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 TIMM9Q9Y5J7 89 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV3-16A0A0C4DH30 117 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 H3BMM0 161 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 P0C879 139 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 RPL27AP46776 148 aaKnown RBP1.84□□□□□ -2.12
PRPF39-206ENST00000554429 RPL28P46779 137 aaKnown RBP1.84□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP10-6P60371 365 aaPredicted RBP1.84□□□□□ -2.12
PRPF39-206ENST00000554429 Q1T7F1 81 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 UBE2WQ96B02 151 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 MRPL35Q9NZE8 188 aaKnown RBP1.84□□□□□ -2.12
PRPF39-206ENST00000554429 DNAH11Q96DT5 4516 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 TEX49A0A1B0GTD5 131 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 SMIM27A0A1W2PRY6 76 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP23-1A1A580 65 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 HCG22E2RYF7 251 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 ZNF22P17026 224 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-206ENST00000554429 C1orf134Q5TEV5 83 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 LYZL1Q6UWQ5 148 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 Q8N814 137 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 FAM104AQ969W3 186 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 RMI2Q96E14 147 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 RPP21Q9H633 154 aaKnown RBP1.83□□□□□ -2.12
PRPF39-206ENST00000554429 TMEM167BQ9NRX6 74 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 FAT2Q9NYQ8 4349 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 DNAH2Q9P225 4427 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 TRBV7-1A0A0A6YYK4 115 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 TRAV13-2A0A0B4J235 113 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 A8MWP4 228 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 F8WEM9 126 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 NPYP01303 97 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 ACYP1P07311 99 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 HTN1P15515 57 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 ERHP84090 104 aaKnown RBP1.83□□□□□ -2.12
PRPF39-206ENST00000554429 EIF4EBP1Q13541 118 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-206ENST00000554429 Q8N1X5 172 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 ZFAND2AQ8N6M9 145 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 IGKV1D-37A0A075B6S9 117 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 IGKV3-20P01619 116 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 CRPP02741 224 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 CRIP1P50238 77 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 TMEM14BQ9NUH8 114 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 A0A096LNJ9 63 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 PRAC2D3DTV9 90 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP4-16G5E9R7 235 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-206ENST00000554429 PRCDQ00LT1 54 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 C1orf64Q8NEQ6 169 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 DYNLRB2Q8TF09 96 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 TMEM141Q96I45 108 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 IGLV5-39A0A0G2JS06 123 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 MYMXA0A1B0GTQ4 84 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 A0A1B0GUT8 65 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 TMEM223A0PJW6 202 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 APLNQ9ULZ1 77 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 IGLV4-3A0A075B6K6 122 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 IGHV3-11P01762 117 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 UBE2D3P61077 147 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 UBE2D2P62837 147 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms