RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 KRTAP4-16G5E9R7 235 aaPredicted RBP3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 H3BMM0 161 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 RRN3P1Q2M238 152 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 DEFB136Q30KP8 78 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 Q5XG85 94 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 Q6ZR54 194 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 LCA10Q71F78 164 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 SCXQ7RTU7 201 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 CEND1Q8N111 149 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 LINC00612Q8N6U2 182 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 C4orf3Q8WVX3 66 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 RMI2Q96E14 147 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 FRAS1Q86XX4 4008 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 HYDINQ4G0P3 5121 aa3.51□□□□□ -1.85
MTHFD1-206ENST00000554353 LOC107984640A0A0U1RRK4 108 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 SDHAF1A6NFY7 115 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 LINC01549A6NIU2 74 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 C11orf86A6NJI1 115 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 H3BUT2 72 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 K7EP34 96 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 ZNF73O43830 326 aaPredicted RBP3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 SMIM13P0DJ93 91 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 DEFB131AP59861 70 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 RPL39P62891 51 aaKnown RBP3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 DEFB114Q30KQ6 69 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 DEFB104AQ8WTQ1 72 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 TMEM141Q96I45 108 aa3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 NAA38Q9BRA0 125 aaKnown RBP3.5□□□□□ -1.85
MTHFD1-206ENST00000554353 MYMXA0A1B0GTQ4 84 aa3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 A0A1B0GW54 56 aa3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 A0A1W2PPM0 123 aa3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 PRM2P04554 102 aa3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 LGALS3P17931 250 aaKnown RBP3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 RHOHQ15669 191 aa3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 FAM74A4Q5TZK3 123 aa3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 RAB37Q96AX2 223 aa3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 LINC00467Q9BRT7 94 aa3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 SPANXDQ9BXN6 97 aa3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 SND1-IT1Q9HBX3 110 aa3.49□□□□□ -1.85
MTHFD1-206ENST00000554353 TRBV7-6A0A0J9YX20 115 aa3.48□□□□□ -1.85
MTHFD1-206ENST00000554353 K7ERJ3 54 aa3.48□□□□□ -1.85
MTHFD1-206ENST00000554353 INAFM2P0DMQ5 153 aa3.48□□□□□ -1.85
MTHFD1-206ENST00000554353 FABP2P12104 132 aa3.48□□□□□ -1.85
MTHFD1-206ENST00000554353 INSL3P51460 131 aa3.48□□□□□ -1.85
MTHFD1-206ENST00000554353 ZNF56Q15929 161 aa3.48□□□□□ -1.85
MTHFD1-206ENST00000554353 MEIG1Q5JSS6 88 aa3.48□□□□□ -1.85
MTHFD1-206ENST00000554353 C20orf203Q8NBC4 194 aa3.48□□□□□ -1.85
MTHFD1-206ENST00000554353 AMELXQ99217 191 aa3.48□□□□□ -1.85
MTHFD1-206ENST00000554353 B9D2Q9BPU9 175 aa3.48□□□□□ -1.85
MTHFD1-206ENST00000554353 IGLV1-50A0A075B6I6 118 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 IGHV1-58A0A0C4DH39 117 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 FAM168BA1KXE4 195 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 I3L3M4 83 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 M0R2P5 195 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 GIG44P09565 113 aaPredicted RBP3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 UBE2AP49459 152 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 TSPEAR-AS2P59090 65 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 C10orf126Q8N4M7 172 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 NHP2Q9NX24 153 aaKnown RBP3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 SPCS1Q9Y6A9 102 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 KMT2AQ03164 3969 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 BIRC6Q9NR09 4857 aa3.47□□□□□ -1.85
MTHFD1-206ENST00000554353 IGHV3-73A0A0B4J1V6 119 aa3.46□□□□□ -1.86
MTHFD1-206ENST00000554353 A0A0J9YY99 117 aa3.46□□□□□ -1.86
MTHFD1-206ENST00000554353 TMEM223A0PJW6 202 aa3.46□□□□□ -1.86
MTHFD1-206ENST00000554353 ZNF815PA8K554 130 aa3.46□□□□□ -1.86
MTHFD1-206ENST00000554353 A8MWV9 139 aa3.46□□□□□ -1.86
MTHFD1-206ENST00000554353 ZNF22P17026 224 aaPredicted RBP3.46□□□□□ -1.86
MTHFD1-206ENST00000554353 UBE2D1P51668 147 aa3.46□□□□□ -1.86
MTHFD1-206ENST00000554353 CFAP126Q5VTH2 177 aa3.46□□□□□ -1.86
MTHFD1-206ENST00000554353 DYNLRB2Q8TF09 96 aa3.46□□□□□ -1.86
MTHFD1-206ENST00000554353 CHCHD7Q9BUK0 85 aa3.46□□□□□ -1.86
MTHFD1-206ENST00000554353 TRAV13-1A0A0B4J241 112 aa3.45□□□□□ -1.86
MTHFD1-206ENST00000554353 H3BMG7 143 aa3.45□□□□□ -1.86
MTHFD1-206ENST00000554353 M0R378 163 aa3.45□□□□□ -1.86
MTHFD1-206ENST00000554353 LEPROTO15243 131 aa3.45□□□□□ -1.86
MTHFD1-206ENST00000554353 IGHV3-53P01767 116 aa3.45□□□□□ -1.86
MTHFD1-206ENST00000554353 HTN1P15515 57 aa3.45□□□□□ -1.86
MTHFD1-206ENST00000554353 CXCL5P42830 114 aa3.45□□□□□ -1.86
MTHFD1-206ENST00000554353 UBE2BP63146 152 aa3.45□□□□□ -1.86
MTHFD1-206ENST00000554353 INSP01308 110 aa3.44□□□□□ -1.86
MTHFD1-206ENST00000554353 IGHV3-30P01768 117 aa3.44□□□□□ -1.86
MTHFD1-206ENST00000554353 IGHV3-30-5P0DP03 117 aa3.44□□□□□ -1.86
MTHFD1-206ENST00000554353 MRPS36P82909 103 aaKnown RBP3.44□□□□□ -1.86
MTHFD1-206ENST00000554353 TMEM170BQ5T4T1 132 aa3.44□□□□□ -1.86
MTHFD1-206ENST00000554353 C3orf22Q8N5N4 141 aa3.44□□□□□ -1.86
MTHFD1-206ENST00000554353 DAND5Q8N907 189 aa3.44□□□□□ -1.86
MTHFD1-206ENST00000554353 PRO0461Q9UI25 63 aa3.44□□□□□ -1.86
MTHFD1-206ENST00000554353 UBE2D4Q9Y2X8 147 aa3.44□□□□□ -1.86
MTHFD1-206ENST00000554353 ALMS1Q8TCU4 4167 aa3.44□□□□□ -1.86
MTHFD1-206ENST00000554353 DNAH10Q8IVF4 4471 aa3.43□□□□□ -1.86
MTHFD1-206ENST00000554353 HECTD4Q9Y4D8 3996 aa3.43□□□□□ -1.86
MTHFD1-206ENST00000554353 C3orf84H3BNL1 204 aa3.43□□□□□ -1.86
MTHFD1-206ENST00000554353 TMEM256-PLSCR3K7ERE1 68 aa3.43□□□□□ -1.86
MTHFD1-206ENST00000554353 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 FAM236AA0A1B0GUQ0 79 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 FAM236BA0A1B0GV22 79 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms