RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 HERC1Q15751 4861 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 CLTCQ00610 1675 aaKnown RBP0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 PTPRZ1P23471 2315 aaPredicted RBP0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 SETBP1Q9Y6X0 1596 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 RNF213Q63HN8 5207 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 HYDINQ4G0P3 5121 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 FXYD6-FXYD2A0A087WZ82 144 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 A0A1B0GU69 56 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 K7EQZ3 153 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 ZNF720Q7Z2F6 126 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 SLIT1O75093 1534 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 CEP350Q5VT06 3117 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 DNAJC13O75165 2243 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 ACACBO00763 2458 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 IGF2RP11717 2491 aa0.37□□□□□ -2.35
LSM6P2-201ENST00000552208 ZFHX4Q86UP3 3567 aa0.36□□□□□ -2.35
LSM6P2-201ENST00000552208 TENM2Q9NT68 2774 aa0.36□□□□□ -2.35
LSM6P2-201ENST00000552208 GNG2P59768 71 aa0.36□□□□□ -2.35
LSM6P2-201ENST00000552208 C9orf62Q8N4C0 152 aa0.36□□□□□ -2.35
LSM6P2-201ENST00000552208 PAPPA2Q9BXP8 1791 aa0.36□□□□□ -2.35
LSM6P2-201ENST00000552208 SHPRHQ149N8 1683 aa0.36□□□□□ -2.35
LSM6P2-201ENST00000552208 AKAP6Q13023 2319 aa0.36□□□□□ -2.35
LSM6P2-201ENST00000552208 MAP1BP46821 2468 aaKnown RBP0.36□□□□□ -2.35
LSM6P2-201ENST00000552208 KNDC1Q76NI1 1749 aa0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 UBR5O95071 2799 aaPredicted RBP0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 KIAA0556O60303 1618 aa0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 NBEAL1Q6ZS30 2694 aa0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 ABCC3O15438 1527 aa0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 CUX1P39880 1505 aa0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 COX6B1P14854 86 aa0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 PYY3Q5JQD4 70 aa0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 USF3Q68DE3 2245 aa0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 PCNTO95613 3336 aa0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 PRKDCP78527 4128 aaKnown RBP0.35□□□□□ -2.35
LSM6P2-201ENST00000552208 ITPR1Q14643 2758 aa0.34□□□□□ -2.35
LSM6P2-201ENST00000552208 BSNQ9UPA5 3926 aa0.34□□□□□ -2.35
LSM6P2-201ENST00000552208 RYR3Q15413 4870 aa0.34□□□□□ -2.35
LSM6P2-201ENST00000552208 PPRC1Q5VV67 1664 aaKnown RBP0.34□□□□□ -2.35
LSM6P2-201ENST00000552208 SPG11Q96JI7 2443 aa0.34□□□□□ -2.35
LSM6P2-201ENST00000552208 K7EP34 96 aa0.34□□□□□ -2.36
LSM6P2-201ENST00000552208 SPRR1AP35321 89 aa0.34□□□□□ -2.36
LSM6P2-201ENST00000552208 SAMD9Q5K651 1589 aa0.34□□□□□ -2.36
LSM6P2-201ENST00000552208 U3KQA8 63 aa0.34□□□□□ -2.36
LSM6P2-201ENST00000552208 PKD1L1Q8TDX9 2849 aa0.34□□□□□ -2.36
LSM6P2-201ENST00000552208 GVINP1Q7Z2Y8 2422 aa0.34□□□□□ -2.36
LSM6P2-201ENST00000552208 COL12A1Q99715 3063 aa0.34□□□□□ -2.36
LSM6P2-201ENST00000552208 HIVEP1P15822 2718 aa0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 EP300Q09472 2414 aaPredicted RBP0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 UTP20O75691 2785 aaKnown RBP0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 ATRQ13535 2644 aa0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 PVALEFA0A1B0GWK0 134 aa0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 CFDP00746 253 aaPredicted RBP0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 GNGT1P63211 74 aa0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 ALKAL2Q6UX46 152 aa0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 MYO3AQ8NEV4 1616 aa0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 SPTBN1Q01082 2364 aaKnown RBP0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 CEP295Q9C0D2 2601 aa0.33□□□□□ -2.36
LSM6P2-201ENST00000552208 MXRA5Q9NR99 2828 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 BIRC6Q9NR09 4857 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 PTPRQQ9UMZ3 2332 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 TEX15Q9BXT5 2789 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 ACANP16112 2415 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 D6R8Y8 96 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 LEPROTL1O95214 131 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 SPRR1BP22528 89 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 MUSTN1Q8IVN3 82 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 RIF1Q5UIP0 2472 aaKnown RBP0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 REV3LO60673 3130 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 KIAA1551Q9HCM1 1747 aa0.32□□□□□ -2.36
LSM6P2-201ENST00000552208 LAMA2P24043 3122 aaKnown RBP0.31□□□□□ -2.36
LSM6P2-201ENST00000552208 HMGN2P05204 90 aaKnown RBP0.31□□□□□ -2.36
LSM6P2-201ENST00000552208 DEFB109BQ30KR1 87 aa0.31□□□□□ -2.36
LSM6P2-201ENST00000552208 UBE2D4Q9Y2X8 147 aa0.31□□□□□ -2.36
LSM6P2-201ENST00000552208 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
LSM6P2-201ENST00000552208 PLIN4Q96Q06 1357 aa0.31□□□□□ -2.36
LSM6P2-201ENST00000552208 TGP01266 2768 aa0.3□□□□□ -2.36
LSM6P2-201ENST00000552208 TNXBP22105 4242 aa0.3□□□□□ -2.36
LSM6P2-201ENST00000552208 LPAP08519 4548 aa0.3□□□□□ -2.36
LSM6P2-201ENST00000552208 NEXMIFQ5QGS0 1516 aa0.3□□□□□ -2.36
LSM6P2-201ENST00000552208 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
LSM6P2-201ENST00000552208 RB1CC1Q8TDY2 1594 aa0.3□□□□□ -2.36
LSM6P2-201ENST00000552208 HMCN2Q8NDA2 5059 aa0.3□□□□□ -2.36
LSM6P2-201ENST00000552208 TLN2Q9Y4G6 2542 aa0.3□□□□□ -2.36
LSM6P2-201ENST00000552208 CSMD1Q96PZ7 3565 aa0.3□□□□□ -2.36
LSM6P2-201ENST00000552208 SZT2Q5T011 3432 aa0.29□□□□□ -2.36
LSM6P2-201ENST00000552208 MGAM2Q2M2H8 2515 aa0.29□□□□□ -2.36
LSM6P2-201ENST00000552208 COL7A1Q02388 2944 aa0.29□□□□□ -2.36
LSM6P2-201ENST00000552208 BOD1L1Q8NFC6 3051 aa0.29□□□□□ -2.36
LSM6P2-201ENST00000552208 CFAP46Q8IYW2 2715 aa0.29□□□□□ -2.36
LSM6P2-201ENST00000552208 C5P01031 1676 aa0.28□□□□□ -2.36
LSM6P2-201ENST00000552208 PKDREJQ9NTG1 2253 aa0.28□□□□□ -2.36
LSM6P2-201ENST00000552208 IGLC2P0DOY2 106 aa0.28□□□□□ -2.36
LSM6P2-201ENST00000552208 IGLC3P0DOY3 106 aa0.28□□□□□ -2.36
LSM6P2-201ENST00000552208 SMIM11AP58511 58 aa0.28□□□□□ -2.36
LSM6P2-201ENST00000552208 PEA15Q15121 130 aa0.28□□□□□ -2.36
LSM6P2-201ENST00000552208 NMSQ5H8A3 153 aa0.28□□□□□ -2.36
LSM6P2-201ENST00000552208 USMG5Q96IX5 58 aa0.28□□□□□ -2.36
LSM6P2-201ENST00000552208 DSPP15924 2871 aaKnown RBP0.28□□□□□ -2.36
LSM6P2-201ENST00000552208 UBR1Q8IWV7 1749 aa0.27□□□□□ -2.37
LSM6P2-201ENST00000552208 S100A16Q96FQ6 103 aaKnown RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms