RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.93□□□□□ -2.56
GPN3-209ENST00000551079 A0A0G2JND7 137 aa-0.93□□□□□ -2.56
GPN3-209ENST00000551079 FASNP49327 2511 aaKnown RBP-0.93□□□□□ -2.56
GPN3-209ENST00000551079 KIF20BQ96Q89 1820 aa-0.94□□□□□ -2.56
GPN3-209ENST00000551079 CUX1P39880 1505 aa-0.94□□□□□ -2.56
GPN3-209ENST00000551079 RYR1P21817 5038 aa-0.94□□□□□ -2.56
GPN3-209ENST00000551079 UBR4Q5T4S7 5183 aa-0.94□□□□□ -2.56
GPN3-209ENST00000551079 TRANK1O15050 2925 aa-0.94□□□□□ -2.56
GPN3-209ENST00000551079 HECTD1Q9ULT8 2610 aa-0.94□□□□□ -2.56
GPN3-209ENST00000551079 DNAH9Q9NYC9 4486 aa-0.94□□□□□ -2.56
GPN3-209ENST00000551079 KIAA1109Q2LD37 5005 aa-0.95□□□□□ -2.56
GPN3-209ENST00000551079 EIF4G3O43432 1585 aaKnown RBP-0.95□□□□□ -2.56
GPN3-209ENST00000551079 HIVEP1P15822 2718 aa-0.95□□□□□ -2.56
GPN3-209ENST00000551079 TACC2O95359 2948 aa-0.95□□□□□ -2.56
GPN3-209ENST00000551079 USP9YO00507 2555 aaPredicted RBP-0.95□□□□□ -2.56
GPN3-209ENST00000551079 C5P01031 1676 aa-0.95□□□□□ -2.56
GPN3-209ENST00000551079 EDC4Q6P2E9 1401 aaKnown RBP-0.96□□□□□ -2.56
GPN3-209ENST00000551079 I3L3M4 83 aa-0.96□□□□□ -2.56
GPN3-209ENST00000551079 LRRC37AA6NMS7 1700 aa-0.96□□□□□ -2.56
GPN3-209ENST00000551079 BCORQ6W2J9 1755 aa-0.96□□□□□ -2.56
GPN3-209ENST00000551079 NCOA3Q9Y6Q9 1424 aa-0.97□□□□□ -2.56
GPN3-209ENST00000551079 FAT3Q8TDW7 4589 aa-0.97□□□□□ -2.56
GPN3-209ENST00000551079 ZZEF1O43149 2961 aa-0.97□□□□□ -2.56
GPN3-209ENST00000551079 H0Y9P7 68 aa-0.97□□□□□ -2.56
GPN3-209ENST00000551079 C9orf62Q8N4C0 152 aa-0.97□□□□□ -2.56
GPN3-209ENST00000551079 MRPL34Q9BQ48 92 aaKnown RBP-0.97□□□□□ -2.56
GPN3-209ENST00000551079 C2orf88Q9BSF0 95 aa-0.97□□□□□ -2.56
GPN3-209ENST00000551079 CACFD1Q9UGQ2 172 aa-0.97□□□□□ -2.56
GPN3-209ENST00000551079 GNG8Q9UK08 70 aa-0.97□□□□□ -2.56
GPN3-209ENST00000551079 ADAMTS12P58397 1594 aa-0.97□□□□□ -2.56
GPN3-209ENST00000551079 VPS13DQ5THJ4 4388 aa-0.98□□□□□ -2.57
GPN3-209ENST00000551079 TMEM262E9PQX1 116 aa-0.98□□□□□ -2.57
GPN3-209ENST00000551079 AKAP9Q99996 3911 aa-0.98□□□□□ -2.57
GPN3-209ENST00000551079 CUBNO60494 3623 aa-0.98□□□□□ -2.57
GPN3-209ENST00000551079 NRXN1Q9ULB1 1477 aa-0.99□□□□□ -2.57
GPN3-209ENST00000551079 MAPKBP1O60336 1514 aa-0.99□□□□□ -2.57
GPN3-209ENST00000551079 MYH4Q9Y623 1939 aa-0.99□□□□□ -2.57
GPN3-209ENST00000551079 PTPN23Q9H3S7 1636 aa-0.99□□□□□ -2.57
GPN3-209ENST00000551079 EFCAB10A6NFE3 127 aa-0.99□□□□□ -2.57
GPN3-209ENST00000551079 TMEM203Q969S6 136 aa-0.99□□□□□ -2.57
GPN3-209ENST00000551079 CGREF1Q99674 301 aa-0.99□□□□□ -2.57
GPN3-209ENST00000551079 H3BQ15 152 aa-1□□□□□ -2.57
GPN3-209ENST00000551079 H3BQF6 201 aa-1□□□□□ -2.57
GPN3-209ENST00000551079 H7BZZ5 65 aa-1□□□□□ -2.57
GPN3-209ENST00000551079 GNGT1P63211 74 aa-1□□□□□ -2.57
GPN3-209ENST00000551079 PSMG4Q5JS54 123 aa-1□□□□□ -2.57
GPN3-209ENST00000551079 HEPN1Q6WQI6 88 aa-1□□□□□ -2.57
GPN3-209ENST00000551079 DNAH3Q8TD57 4116 aa-1□□□□□ -2.57
GPN3-209ENST00000551079 MLH3Q9UHC1 1453 aa-1□□□□□ -2.57
GPN3-209ENST00000551079 ZFYVE16Q7Z3T8 1539 aa-1□□□□□ -2.57
GPN3-209ENST00000551079 HTTP42858 3142 aa-1□□□□□ -2.57
GPN3-209ENST00000551079 TRBV25-1A0A075B6N4 114 aa-1.01□□□□□ -2.57
GPN3-209ENST00000551079 GNGT2O14610 69 aa-1.01□□□□□ -2.57
GPN3-209ENST00000551079 WFDC13Q8IUB5 93 aa-1.01□□□□□ -2.57
GPN3-209ENST00000551079 MYO18BQ8IUG5 2567 aa-1.01□□□□□ -2.57
GPN3-209ENST00000551079 ITPR3Q14573 2671 aa-1.01□□□□□ -2.57
GPN3-209ENST00000551079 PKHD1L1Q86WI1 4243 aa-1.01□□□□□ -2.57
GPN3-209ENST00000551079 CCDC141Q6ZP82 1450 aa-1.01□□□□□ -2.57
GPN3-209ENST00000551079 DMXL1Q9Y485 3027 aa-1.01□□□□□ -2.57
GPN3-209ENST00000551079 CRYBG1Q9Y4K1 1723 aa-1.01□□□□□ -2.57
GPN3-209ENST00000551079 TEP1Q99973 2627 aaKnown RBP-1.02□□□□□ -2.57
GPN3-209ENST00000551079 MT-ATP8P03928 68 aa-1.02□□□□□ -2.57
GPN3-209ENST00000551079 KRTDAPP60985 99 aa-1.02□□□□□ -2.57
GPN3-209ENST00000551079 GTF2H5Q6ZYL4 71 aa-1.02□□□□□ -2.57
GPN3-209ENST00000551079 VAMP8Q9BV40 100 aa-1.02□□□□□ -2.57
GPN3-209ENST00000551079 MUC17Q685J3 4493 aa-1.03□□□□□ -2.57
GPN3-209ENST00000551079 SAMD9Q5K651 1589 aa-1.03□□□□□ -2.57
GPN3-209ENST00000551079 PRDM15P57071 1507 aaPredicted RBP-1.03□□□□□ -2.57
GPN3-209ENST00000551079 ARMS2P0C7Q2 107 aa-1.03□□□□□ -2.57
GPN3-209ENST00000551079 ACACAQ13085 2346 aa-1.03□□□□□ -2.57
GPN3-209ENST00000551079 C4AP0C0L4 1744 aa-1.03□□□□□ -2.58
GPN3-209ENST00000551079 C4BP0C0L5 1744 aa-1.03□□□□□ -2.58
GPN3-209ENST00000551079 QSER1Q2KHR3 1735 aa-1.03□□□□□ -2.58
GPN3-209ENST00000551079 PKD1L3Q7Z443 1732 aa-1.03□□□□□ -2.58
GPN3-209ENST00000551079 PMCHL1Q16048 86 aa-1.04□□□□□ -2.58
GPN3-209ENST00000551079 SPRR2FQ96RM1 72 aa-1.04□□□□□ -2.58
GPN3-209ENST00000551079 TRGV9Q99603 122 aa-1.04□□□□□ -2.58
GPN3-209ENST00000551079 UBR3Q6ZT12 1888 aa-1.05□□□□□ -2.58
GPN3-209ENST00000551079 ANKRD36BQ8N2N9 1353 aa-1.05□□□□□ -2.58
GPN3-209ENST00000551079 TRBV7-7A0A0K0K1E9 115 aa-1.05□□□□□ -2.58
GPN3-209ENST00000551079 PMCHL2Q9BQD1 86 aa-1.05□□□□□ -2.58
GPN3-209ENST00000551079 CICQ96RK0 1608 aaPredicted RBP-1.05□□□□□ -2.58
GPN3-209ENST00000551079 TROQ12816 1431 aaPredicted RBP-1.06□□□□□ -2.58
GPN3-209ENST00000551079 SCN11AQ9UI33 1791 aa-1.06□□□□□ -2.58
GPN3-209ENST00000551079 RGPD1P0DJD0 1748 aa-1.06□□□□□ -2.58
GPN3-209ENST00000551079 TRAV30A0A087WSZ9 112 aa-1.06□□□□□ -2.58
GPN3-209ENST00000551079 SPTY2D1-AS1A0A0U1RR47 76 aa-1.06□□□□□ -2.58
GPN3-209ENST00000551079 PSENENQ9NZ42 101 aa-1.06□□□□□ -2.58
GPN3-209ENST00000551079 EPPK1P58107 5090 aaKnown RBP-1.07□□□□□ -2.58
GPN3-209ENST00000551079 UQCRHP07919 91 aa-1.07□□□□□ -2.58
GPN3-209ENST00000551079 IGLC2P0DOY2 106 aa-1.07□□□□□ -2.58
GPN3-209ENST00000551079 IGLC3P0DOY3 106 aa-1.07□□□□□ -2.58
GPN3-209ENST00000551079 CDKN2A-AS1Q9UH64 79 aa-1.07□□□□□ -2.58
GPN3-209ENST00000551079 C20orf202A1L168 122 aa-1.08□□□□□ -2.58
GPN3-209ENST00000551079 CCL22O00626 93 aa-1.08□□□□□ -2.58
GPN3-209ENST00000551079 HIGD1BQ9P298 99 aa-1.08□□□□□ -2.58
GPN3-209ENST00000551079 PREX1Q8TCU6 1659 aa-1.08□□□□□ -2.58
GPN3-209ENST00000551079 CCDC168Q8NDH2 2452 aa-1.08□□□□□ -2.58
GPN3-209ENST00000551079 LRRK2Q5S007 2527 aa-1.09□□□□□ -2.58
GPN3-209ENST00000551079 UBR1Q8IWV7 1749 aa-1.09□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms