RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 ATP5EP56381 51 aaPredicted RBP3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 SCGB1D4Q6XE38 83 aa3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 DAZ4Q86SG3 579 aaKnown RBP3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 LINC00643Q86TS7 51 aa3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 FAM223AQ8IWN6 122 aa3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 IFI27L1Q96BM0 104 aa3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 IGF2BP2-AS1Q96M15 143 aa3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 TRGV9Q99603 122 aa3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 APLNQ9ULZ1 77 aa3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 HHLA3Q9XRX5 114 aa3.69□□□□□ -1.82
TGFBR1-208ENST00000550253 DNAH5Q8TE73 4624 aa3.68□□□□□ -1.82
TGFBR1-208ENST00000550253 TMEM14DPA8MWL7 114 aa3.68□□□□□ -1.82
TGFBR1-208ENST00000550253 SLC25A20O43772 301 aa3.68□□□□□ -1.82
TGFBR1-208ENST00000550253 SAA1P0DJI8 122 aaPredicted RBP3.68□□□□□ -1.82
TGFBR1-208ENST00000550253 C5orf38Q86SI9 138 aa3.68□□□□□ -1.82
TGFBR1-208ENST00000550253 GPHB5Q86YW7 130 aa3.68□□□□□ -1.82
TGFBR1-208ENST00000550253 KRTAP11-1Q8IUC1 163 aa3.68□□□□□ -1.82
TGFBR1-208ENST00000550253 UPK3BQ9BT76 320 aa3.68□□□□□ -1.82
TGFBR1-208ENST00000550253 UBE2L5PA0A1B0GUS4 154 aa3.67□□□□□ -1.82
TGFBR1-208ENST00000550253 SYNGR2O43760 224 aa3.67□□□□□ -1.82
TGFBR1-208ENST00000550253 ZNF56Q15929 161 aa3.67□□□□□ -1.82
TGFBR1-208ENST00000550253 LINC00305Q7Z4B0 112 aa3.67□□□□□ -1.82
TGFBR1-208ENST00000550253 LYZL2Q7Z4W2 148 aa3.67□□□□□ -1.82
TGFBR1-208ENST00000550253 ARHGAP5-AS1Q96IT6 56 aa3.67□□□□□ -1.82
TGFBR1-208ENST00000550253 KLK12Q9UKR0 248 aa3.67□□□□□ -1.82
TGFBR1-208ENST00000550253 TRBV25-1A0A075B6N4 114 aa3.66□□□□□ -1.82
TGFBR1-208ENST00000550253 IGHV3OR16-8A0A075B7F1 116 aa3.66□□□□□ -1.82
TGFBR1-208ENST00000550253 H3BMM0 161 aa3.66□□□□□ -1.82
TGFBR1-208ENST00000550253 TCRAP04437 139 aa3.66□□□□□ -1.82
TGFBR1-208ENST00000550253 DAD1P61803 113 aa3.66□□□□□ -1.82
TGFBR1-208ENST00000550253 KLK9Q2XQG4 91 aa3.66□□□□□ -1.82
TGFBR1-208ENST00000550253 ST20-AS1Q8NBB2 130 aa3.66□□□□□ -1.82
TGFBR1-208ENST00000550253 UBE2WQ96B02 151 aa3.66□□□□□ -1.82
TGFBR1-208ENST00000550253 KLK9Q9UKQ9 250 aa3.66□□□□□ -1.82
TGFBR1-208ENST00000550253 TRBV7-3A0A075B6L6 115 aa3.65□□□□□ -1.82
TGFBR1-208ENST00000550253 IGHV1-58A0A0C4DH39 117 aa3.65□□□□□ -1.82
TGFBR1-208ENST00000550253 C19orf71A6NCJ1 209 aa3.65□□□□□ -1.82
TGFBR1-208ENST00000550253 EIF4EBP1Q13541 118 aaPredicted RBP3.65□□□□□ -1.82
TGFBR1-208ENST00000550253 TMEM75Q8N9X5 138 aa3.65□□□□□ -1.82
TGFBR1-208ENST00000550253 C11orf68Q9H3H3 251 aaKnown RBP3.65□□□□□ -1.82
TGFBR1-208ENST00000550253 TRBV20OR9-2A0A075B6H5 130 aa3.65□□□□□ -1.83
TGFBR1-208ENST00000550253 TRBV10-2A0A0K0K1G8 114 aa3.65□□□□□ -1.83
TGFBR1-208ENST00000550253 M0R2N4 97 aa3.65□□□□□ -1.83
TGFBR1-208ENST00000550253 LTAP01374 205 aa3.65□□□□□ -1.83
TGFBR1-208ENST00000550253 HBDP02042 147 aa3.65□□□□□ -1.83
TGFBR1-208ENST00000550253 UBE2D1P51668 147 aa3.65□□□□□ -1.83
TGFBR1-208ENST00000550253 HBBP68871 147 aa3.65□□□□□ -1.83
TGFBR1-208ENST00000550253 SDIM1Q6ZPB5 146 aa3.65□□□□□ -1.83
TGFBR1-208ENST00000550253 Q8NAQ8 132 aa3.65□□□□□ -1.83
TGFBR1-208ENST00000550253 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
TGFBR1-208ENST00000550253 TRAV3A0A0B4J244 114 aa3.64□□□□□ -1.83
TGFBR1-208ENST00000550253 LOC107984156A0A0G2JMH3 177 aa3.64□□□□□ -1.83
TGFBR1-208ENST00000550253 H3BVH4 76 aa3.64□□□□□ -1.83
TGFBR1-208ENST00000550253 ATXN8Q156A1 80 aa3.64□□□□□ -1.83
TGFBR1-208ENST00000550253 ARL17AQ8IVW1 177 aa3.64□□□□□ -1.83
TGFBR1-208ENST00000550253 ZNF492Q9P255 531 aa3.64□□□□□ -1.83
TGFBR1-208ENST00000550253 IGHV3-21A0A0B4J1V1 117 aa3.63□□□□□ -1.83
TGFBR1-208ENST00000550253 BCE1O60756 84 aa3.63□□□□□ -1.83
TGFBR1-208ENST00000550253 LGALS3P17931 250 aaKnown RBP3.63□□□□□ -1.83
TGFBR1-208ENST00000550253 RPL27AP46776 148 aaKnown RBP3.63□□□□□ -1.83
TGFBR1-208ENST00000550253 FP248Q71RG6 208 aaPredicted RBP3.63□□□□□ -1.83
TGFBR1-208ENST00000550253 KTN1-AS1Q86SY8 53 aa3.63□□□□□ -1.83
TGFBR1-208ENST00000550253 TMEM167AQ8TBQ9 72 aa3.63□□□□□ -1.83
TGFBR1-208ENST00000550253 UBR4Q5T4S7 5183 aa3.62□□□□□ -1.83
TGFBR1-208ENST00000550253 FAT1Q14517 4588 aa3.62□□□□□ -1.83
TGFBR1-208ENST00000550253 IGKV3-7A0A075B6H7 116 aa3.62□□□□□ -1.83
TGFBR1-208ENST00000550253 TRBV7-1A0A0A6YYK4 115 aa3.62□□□□□ -1.83
TGFBR1-208ENST00000550253 WT1-ASQ06250 92 aa3.62□□□□□ -1.83
TGFBR1-208ENST00000550253 IGLV2-18A0A075B6J9 118 aa3.61□□□□□ -1.83
TGFBR1-208ENST00000550253 TMSB15BA0A087X1C1 80 aa3.61□□□□□ -1.83
TGFBR1-208ENST00000550253 A0A0B4J2C4 111 aa3.61□□□□□ -1.83
TGFBR1-208ENST00000550253 LINC01549A6NIU2 74 aa3.61□□□□□ -1.83
TGFBR1-208ENST00000550253 NDUFC1O43677 76 aa3.61□□□□□ -1.83
TGFBR1-208ENST00000550253 SNRPD3P62318 126 aaKnown RBP3.61□□□□□ -1.83
TGFBR1-208ENST00000550253 PSENENQ9NZ42 101 aa3.61□□□□□ -1.83
TGFBR1-208ENST00000550253 C16orf90A8MZG2 172 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 K7ERS5 55 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 NDUFA4O00483 81 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 CTSGP08311 255 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 DEFA4P12838 97 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 GDF5OSQ5U4N7 250 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 RHPN1-AS1Q9BWJ2 59 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 NPCDR1Q9BY65 106 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 TMEM167BQ9NRX6 74 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 IGKV2D-24A0A075B6R9 120 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 TRAV10A0A0B4J240 114 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 TRBV27A0A0K0K1C4 114 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 A8MWP4 228 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 K7EIM0 57 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 SPINK4O60575 86 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 TIMM17BO60830 172 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 ADM2Q7Z4H4 148 aa3.6□□□□□ -1.83
TGFBR1-208ENST00000550253 DEFB131BA0A096LNP1 70 aa3.59□□□□□ -1.84
TGFBR1-208ENST00000550253 TEX49A0A1B0GTD5 131 aa3.59□□□□□ -1.84
TGFBR1-208ENST00000550253 UBE2L6O14933 153 aa3.59□□□□□ -1.84
TGFBR1-208ENST00000550253 IFI27P40305 119 aaPredicted RBP3.59□□□□□ -1.84
TGFBR1-208ENST00000550253 DEFB131AP59861 70 aa3.59□□□□□ -1.84
TGFBR1-208ENST00000550253 A8MUU9 505 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 HIGD1CA8MV81 97 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms