RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 FAM236CP0DP71 79 aa11.7□□□□□ -0.54
ATXN2-219ENST00000550104 LYPD5Q6UWN5 251 aa11.7□□□□□ -0.54
ATXN2-219ENST00000550104 GCN1Q92616 2671 aaKnown RBP11.7□□□□□ -0.54
ATXN2-219ENST00000550104 TRAV10A0A0B4J240 114 aa11.69□□□□□ -0.54
ATXN2-219ENST00000550104 Q6ZQY7 126 aa11.68□□□□□ -0.54
ATXN2-219ENST00000550104 SETXQ7Z333 2677 aaKnown RBP11.68□□□□□ -0.54
ATXN2-219ENST00000550104 V9GYY9 64 aa11.68□□□□□ -0.54
ATXN2-219ENST00000550104 TEP1Q99973 2627 aaKnown RBP11.67□□□□□ -0.54
ATXN2-219ENST00000550104 USP17L23D6RBM5 183 aa11.67□□□□□ -0.54
ATXN2-219ENST00000550104 IGKV2-24A0A0C4DH68 120 aa11.67□□□□□ -0.54
ATXN2-219ENST00000550104 SERP2Q8N6R1 65 aa11.67□□□□□ -0.54
ATXN2-219ENST00000550104 IMUPQ9GZP8 106 aa11.66□□□□□ -0.54
ATXN2-219ENST00000550104 IGKV2-28A0A075B6P5 120 aa11.65□□□□□ -0.54
ATXN2-219ENST00000550104 IGKV2D-28P01615 120 aa11.65□□□□□ -0.54
ATXN2-219ENST00000550104 MGAM2Q2M2H8 2515 aa11.65□□□□□ -0.54
ATXN2-219ENST00000550104 ENHOQ6UWT2 76 aa11.64□□□□□ -0.55
ATXN2-219ENST00000550104 Q8NAQ8 132 aa11.64□□□□□ -0.55
ATXN2-219ENST00000550104 NBEAL2Q6ZNJ1 2754 aa11.63□□□□□ -0.55
ATXN2-219ENST00000550104 A0A087WVE0 104 aa11.63□□□□□ -0.55
ATXN2-219ENST00000550104 ITPR2Q14571 2701 aa11.63□□□□□ -0.55
ATXN2-219ENST00000550104 UPK3BQ9BT76 320 aa11.63□□□□□ -0.55
ATXN2-219ENST00000550104 TRBV10-3A0A0K0K1G6 114 aa11.62□□□□□ -0.55
ATXN2-219ENST00000550104 H3BQ85 93 aa11.62□□□□□ -0.55
ATXN2-219ENST00000550104 FAM218AQ96MZ4 157 aa11.62□□□□□ -0.55
ATXN2-219ENST00000550104 SNURFQ9Y675 71 aa11.62□□□□□ -0.55
ATXN2-219ENST00000550104 FAM240AA0A1B0GVK7 77 aa11.62□□□□□ -0.55
ATXN2-219ENST00000550104 WFDC9Q8NEX5 89 aa11.61□□□□□ -0.55
ATXN2-219ENST00000550104 ZNF73O43830 326 aaPredicted RBP11.61□□□□□ -0.55
ATXN2-219ENST00000550104 Q8N814 137 aa11.61□□□□□ -0.55
ATXN2-219ENST00000550104 LINC01561Q8N1V8 128 aa11.61□□□□□ -0.55
ATXN2-219ENST00000550104 UBR5O95071 2799 aaPredicted RBP11.6□□□□□ -0.55
ATXN2-219ENST00000550104 M0R378 163 aa11.6□□□□□ -0.55
ATXN2-219ENST00000550104 FUSP35637 526 aaKnown RBP eCLIP11.6□□□□□ -0.552e-6■■□□□ 13.2
ATXN2-219ENST00000550104 KRTAP24-1Q3LI83 254 aa11.6□□□□□ -0.55
ATXN2-219ENST00000550104 EGFEM1PQ0D2K5 195 aa11.59□□□□□ -0.55
ATXN2-219ENST00000550104 MUC7Q8TAX7 377 aa11.59□□□□□ -0.55
ATXN2-219ENST00000550104 C10orf25Q5T742 122 aa11.58□□□□□ -0.56
ATXN2-219ENST00000550104 FAM104AQ969W3 186 aa11.58□□□□□ -0.56
ATXN2-219ENST00000550104 NREPQ16612 68 aa11.58□□□□□ -0.56
ATXN2-219ENST00000550104 SPATA3Q8NHX4 192 aa11.58□□□□□ -0.56
ATXN2-219ENST00000550104 PDE6GP18545 87 aa11.58□□□□□ -0.56
ATXN2-219ENST00000550104 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.57□□□□□ -0.56
ATXN2-219ENST00000550104 SCXQ7RTU7 201 aa11.57□□□□□ -0.56
ATXN2-219ENST00000550104 FAM19A3Q7Z5A8 133 aa11.57□□□□□ -0.56
ATXN2-219ENST00000550104 APCP25054 2843 aa11.56□□□□□ -0.56
ATXN2-219ENST00000550104 C1orf195Q5TG92 126 aa11.56□□□□□ -0.56
ATXN2-219ENST00000550104 RPL37AP8A6NKH3 93 aa11.56□□□□□ -0.56
ATXN2-219ENST00000550104 ESRGQ1W209 222 aa11.55□□□□□ -0.56
ATXN2-219ENST00000550104 CELSR2Q9HCU4 2923 aa11.54□□□□□ -0.56
ATXN2-219ENST00000550104 Q6ZRU5 148 aa11.54□□□□□ -0.56
ATXN2-219ENST00000550104 NDUFC2-KCTD14E9PQ53 114 aa11.53□□□□□ -0.56
ATXN2-219ENST00000550104 HIGD2AQ9BW72 106 aa11.53□□□□□ -0.56
ATXN2-219ENST00000550104 LINC00612Q8N6U2 182 aa11.51□□□□□ -0.57
ATXN2-219ENST00000550104 SPTSSBQ8NFR3 76 aa11.51□□□□□ -0.57
ATXN2-219ENST00000550104 CCKP06307 115 aa11.5□□□□□ -0.57
ATXN2-219ENST00000550104 C4orf26Q17RF5 130 aa11.5□□□□□ -0.57
ATXN2-219ENST00000550104 C6orf48Q9UBA6 75 aa11.5□□□□□ -0.57
ATXN2-219ENST00000550104 NF1P21359 2839 aa11.49□□□□□ -0.57
ATXN2-219ENST00000550104 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.48□□□□□ -0.57
ATXN2-219ENST00000550104 LINC00575Q6W349 94 aa11.48□□□□□ -0.57
ATXN2-219ENST00000550104 UBE2AP49459 152 aa11.48□□□□□ -0.57
ATXN2-219ENST00000550104 FAM19A1Q7Z5A9 133 aa11.47□□□□□ -0.57
ATXN2-219ENST00000550104 LINC00846Q9NV44 126 aa11.47□□□□□ -0.57
ATXN2-219ENST00000550104 CSMD1Q96PZ7 3565 aa11.46□□□□□ -0.57
ATXN2-219ENST00000550104 NOTCH1P46531 2555 aa11.46□□□□□ -0.57
ATXN2-219ENST00000550104 C3orf84H3BNL1 204 aa11.46□□□□□ -0.57
ATXN2-219ENST00000550104 C2orf48Q96LS8 159 aa11.46□□□□□ -0.58
ATXN2-219ENST00000550104 ATP5EP2Q5VTU8 51 aa11.45□□□□□ -0.58
ATXN2-219ENST00000550104 NHLRC4P0CG21 123 aaPredicted RBP11.45□□□□□ -0.58
ATXN2-219ENST00000550104 FBN2P35556 2912 aa11.45□□□□□ -0.58
ATXN2-219ENST00000550104 KRTAP10-11P60412 298 aa11.45□□□□□ -0.58
ATXN2-219ENST00000550104 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
ATXN2-219ENST00000550104 C14orf177Q52M58 125 aa11.44□□□□□ -0.58
ATXN2-219ENST00000550104 LINC01556Q5JQF7 62 aa11.44□□□□□ -0.58
ATXN2-219ENST00000550104 Q6JHZ5 121 aa11.44□□□□□ -0.58
ATXN2-219ENST00000550104 BPY2O14599 106 aa11.43□□□□□ -0.58
ATXN2-219ENST00000550104 SMIM26A0A096LP01 95 aa11.43□□□□□ -0.58
ATXN2-219ENST00000550104 TRBV7-7A0A0K0K1E9 115 aa11.42□□□□□ -0.58
ATXN2-219ENST00000550104 COL6A5A8TX70 2615 aa11.42□□□□□ -0.58
ATXN2-219ENST00000550104 LRCOL1A6NCL2 159 aa11.42□□□□□ -0.58
ATXN2-219ENST00000550104 H3BNG1 76 aa11.42□□□□□ -0.58
ATXN2-219ENST00000550104 M0R2N4 97 aa11.42□□□□□ -0.58
ATXN2-219ENST00000550104 KIAA0087Q14695 138 aa11.42□□□□□ -0.58
ATXN2-219ENST00000550104 A0A096LNI7 61 aa11.4□□□□□ -0.58
ATXN2-219ENST00000550104 CDK2AP2O75956 126 aa11.4□□□□□ -0.58
ATXN2-219ENST00000550104 PRR4Q16378 134 aa11.4□□□□□ -0.58
ATXN2-219ENST00000550104 DHRS4-AS1Q9P1J3 65 aa11.4□□□□□ -0.59
ATXN2-219ENST00000550104 MXRA5Q9NR99 2828 aa11.4□□□□□ -0.59
ATXN2-219ENST00000550104 STAB1Q9NY15 2570 aa11.38□□□□□ -0.59
ATXN2-219ENST00000550104 SVEP1Q4LDE5 3571 aa11.38□□□□□ -0.59
ATXN2-219ENST00000550104 SERP1Q9Y6X1 66 aa11.37□□□□□ -0.59
ATXN2-219ENST00000550104 PRR34Q9NV39 138 aa11.35□□□□□ -0.59
ATXN2-219ENST00000550104 CELSR1Q9NYQ6 3014 aa11.35□□□□□ -0.59
ATXN2-219ENST00000550104 PRO0628Q9UI54 55 aa11.34□□□□□ -0.59
ATXN2-219ENST00000550104 CRYGAP11844 174 aa11.32□□□□□ -0.6
ATXN2-219ENST00000550104 B9D2Q9BPU9 175 aa11.32□□□□□ -0.6
ATXN2-219ENST00000550104 LINC00588Q9Y4M8 146 aa11.32□□□□□ -0.6
ATXN2-219ENST00000550104 SPENQ96T58 3664 aaKnown RBP11.32□□□□□ -0.6
ATXN2-219ENST00000550104 F8WDY8 70 aa11.32□□□□□ -0.6
ATXN2-219ENST00000550104 C7orf33Q8WU49 177 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms